Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0218031 Helianthus annuus HOM05D006669 ORTHO05D008440 3.4e-55 218.0 103 100.0
HanXRQChr12g0376911 Helianthus annuus HOM05D006669 ORTHO05D008440 5.6e-50 200.7 97 96.9
ECA246G2447 Erigeron canadensis HOM05D006669 ORTHO05D008440 6.4e-46 187.2 97 86.6
Lsat_1_v5_gn_3_88261 Lactuca sativa HOM05D006669 ORTHO05D008440 3.7e-38 161.4 97 75.3
Actinidia21236 Actinidia chinensis HOM05D006669 ORTHO05D008440 1.4e-37 159.5 97 75.3
Actinidia16443 Actinidia chinensis HOM05D006669 ORTHO05D008440 5.4e-37 157.5 97 74.2
Lj4C159G4 Lonicera japonica HOM05D006669 ORTHO05D008440 2.3e-35 152.1 97 71.1
Nn1g04622 Nelumbo nucifera HOM05D006669 ORTHO05D008440 2.3e-35 152.1 97 68.0
Prupe.6G224500 Prunus persica HOM05D006669 ORTHO05D008440 3.0e-35 151.8 97 71.1
vmacro17989 Vaccinium macrocarpon HOM05D006669 ORTHO05D008440 3.0e-35 151.8 97 72.2
TWI53G1681 Tripterygium wilfordii HOM05D006669 ORTHO05D008440 5.1e-35 151.0 96 70.8
MD15G1293100 Malus domestica HOM05D006669 ORTHO05D008440 6.6e-35 150.6 94 73.4
Aqoxy6G02742 Aquilegia oxysepala HOM05D006669 ORTHO05D008440 8.6e-35 150.2 97 72.2
Sabra07G0046000 Salix brachista HOM05D006669 ORTHO05D008440 1.9e-34 149.1 97 73.2
Eucgr.I00723 Eucalyptus grandis HOM05D006669 ORTHO05D008440 2.5e-34 148.7 96 69.8
THA.LOC104807621 Tarenaya hassleriana HOM05D006669 ORTHO05D008440 3.3e-34 148.3 97 72.2
CANSAT01G1540 Cannabis sativa HOM05D006669 ORTHO05D008440 5.6e-34 147.5 96 74.0
VMungo1215G2631 Vigna mungo HOM05D006669 ORTHO05D008440 5.6e-34 147.5 99 71.7
Rhsim08G0095700 Rhododendron simsii HOM05D006669 ORTHO05D008440 9.5e-34 146.7 97 69.1
Atru.chr3.203 Acer truncatum HOM05D006669 ORTHO05D008440 1.2e-33 146.4 97 69.1
Hma1.2p1_1506F.1_g287530 Hydrangea macrophylla HOM05D006669 ORTHO05D008440 1.2e-33 146.4 97 71.1
Hma1.2p1_1506F.1_g287540 Hydrangea macrophylla HOM05D006669 ORTHO05D008440 1.2e-33 146.4 97 71.1
QL06p039922 Quercus lobata HOM05D006669 ORTHO05D008440 1.2e-33 146.4 96 74.0
Thecc.01G068300 Theobroma cacao HOM05D006669 ORTHO05D008440 1.2e-33 146.4 97 70.1
Potri.007G052400 Populus trichocarpa HOM05D006669 ORTHO05D008440 2.1e-33 145.6 97 71.1
Gohir.A02G153400 Gossypium hirsutum HOM05D006669 ORTHO05D008440 2.8e-33 145.2 97 71.1
PGR004G0108 Punica granatum HOM05D006669 ORTHO05D008440 3.6e-33 144.8 97 71.1
GSVIVG01000155001 Vitis vinifera HOM05D006669 ORTHO05D008440 3.6e-33 144.8 97 70.1
Haze_15316 Corylus avellana HOM05D006669 ORTHO05D008440 4.7e-33 144.4 84 79.8
Medtr5g016110 Medicago truncatula HOM05D006669 ORTHO05D008440 4.7e-33 144.4 96 74.0
Phvul.002G013400 Phaseolus vulgaris HOM05D006669 ORTHO05D008440 4.7e-33 144.4 99 70.7
TPR.G20965 Trifolium pratense HOM05D006669 ORTHO05D008440 4.7e-33 144.4 96 74.0
Glyma.01G191500 Glycine max HOM05D006669 ORTHO05D008440 6.2e-33 144.1 97 69.1
TAR381G0156 Trochodendron aralioides HOM05D006669 ORTHO05D008440 6.2e-33 144.1 98 69.4
Ciclev10027520m.g Citrus clementina HOM05D006669 ORTHO05D008440 1.4e-32 142.9 94 69.1
DCAR_025954 Daucus carota HOM05D006669 ORTHO05D008440 1.4e-32 142.9 97 69.1
MSTRG.2837 Avicennia marina HOM05D006669 ORTHO05D008440 1.8e-32 142.5 97 66.0
CiPaw.02G004600 Carya illinoinensis HOM05D006669 ORTHO05D008440 1.8e-32 142.5 94 70.2
COL.COLO4_11531 Corchorus olitorius HOM05D006669 ORTHO05D008440 3.1e-32 141.7 97 68.0
Gohir.D03G027000 Gossypium hirsutum HOM05D006669 ORTHO05D008440 4.0e-32 141.4 97 69.1
Gorai.003G028700 Gossypium raimondii HOM05D006669 ORTHO05D008440 4.0e-32 141.4 97 69.1
EL10Ac6g15658 Beta vulgaris HOM05D006669 ORTHO05D008440 6.8e-32 140.6 96 67.7
Migut.H00372 Erythranthe guttata HOM05D006669 ORTHO05D008440 6.8e-32 140.6 97 67.0
FvH4_1g17190 Fragaria vesca HOM05D006669 ORTHO05D008440 8.9e-32 140.2 91 69.2
FAN26G1063 Fragaria x ananassa HOM05D006669 ORTHO05D008440 8.9e-32 140.2 91 69.2
FAN28G0180 Fragaria x ananassa HOM05D006669 ORTHO05D008440 8.9e-32 140.2 91 69.2
Manes.12G112200 Manihot esculenta HOM05D006669 ORTHO05D008440 8.9e-32 140.2 97 66.0
Sc16g0000050 Simmondsia chinensis HOM05D006669 ORTHO05D008440 8.9e-32 140.2 94 70.2
arahy.Tifrunner.gnm1.ann1.37Y375 Arachis hypogaea HOM05D006669 ORTHO05D008440 1.5e-31 139.4 99 67.7
arahy.Tifrunner.gnm1.ann1.QDP4K1 Arachis hypogaea HOM05D006669 ORTHO05D008440 1.5e-31 139.4 99 67.7
Ca_24710_v3 Cicer arietinum L. HOM05D006669 ORTHO05D008440 1.5e-31 139.4 96 70.8
Glyma.11G050600 Glycine max HOM05D006669 ORTHO05D008440 1.5e-31 139.4 94 70.2
Cpa.g.sc6.52 Carica papaya HOM05D006669 ORTHO05D008440 2.6e-31 138.7 97 67.0
Duzib147G0464 Durio zibethinus HOM05D006669 ORTHO05D008440 2.6e-31 138.7 97 67.0
Psat0s1712g0160 Pisum sativum HOM05D006669 ORTHO05D008440 2.6e-31 138.7 96 70.8
Oeu040598.1 Olea europaea HOM05D006669 ORTHO05D008440 3.4e-31 138.3 94 68.1
CSS0011361 Camellia sinensis var. sinensis HOM05D006669 ORTHO05D008440 4.4e-31 137.9 97 68.0
CSS0012464 Camellia sinensis var. sinensis HOM05D006669 ORTHO05D008440 4.4e-31 137.9 97 68.0
FAN19G2999 Fragaria x ananassa HOM05D006669 ORTHO05D008440 4.4e-31 137.9 91 68.1
Lalb_Chr09g0323441 Lupinus albus HOM05D006669 ORTHO05D008440 4.4e-31 137.9 99 69.7
RcHm_v2.0_Chr2g0107341 Rosa chinensis HOM05D006669 ORTHO05D008440 5.8e-31 137.5 91 67.0
Cc07_g06760 Coffea canephora HOM05D006669 ORTHO05D008440 7.5e-31 137.1 97 64.9
BcaB03g12341 Brassica carinata HOM05D006669 ORTHO05D008440 2.9e-30 135.2 97 64.9
AUR62003969 Chenopodium quinoa HOM05D006669 ORTHO05D008440 2.9e-30 135.2 96 65.6
Sp7g35160 Schrenkiella parvula HOM05D006669 ORTHO05D008440 2.9e-30 135.2 97 64.9
SGA_v2.0_scaffold15G07411 Striga asiatica HOM05D006669 ORTHO05D008440 2.9e-30 135.2 97 63.9
Nitab4.5_0001772g0050 Nicotiana tabacum HOM05D006669 ORTHO05D008440 4.9e-30 134.4 97 64.9
Nitab4.5_0004400g0020 Nicotiana tabacum HOM05D006669 ORTHO05D008440 4.9e-30 134.4 97 64.9
Lj2g0024438 Lotus japonicus HOM05D006669 ORTHO05D008440 6.4e-30 134.0 99 65.7
SalBow6G5653 Salvia bowleyana HOM05D006669 ORTHO05D008440 6.4e-30 134.0 97 62.9
Carub.0007s0280 Capsella rubella HOM05D006669 ORTHO05D008440 1.1e-29 133.3 97 63.9
AL7G13310 Arabidopsis lyrata HOM05D006669 ORTHO05D008440 1.4e-29 132.9 97 63.9
AT4G37480 Arabidopsis thaliana HOM05D006669 ORTHO05D008440 1.9e-29 132.5 97 63.9
CAN.G1290.5 Capsicum annuum HOM05D006669 ORTHO05D008440 3.2e-29 131.7 97 66.0
Aa31LG6G14350 Aethionema arabicum HOM05D006669 ORTHO05D008440 4.1e-29 131.3 97 64.9
Thhalv10024891m.g Eutrema salsugineum HOM05D006669 ORTHO05D008440 5.4e-29 131.0 97 64.9
MELO3C007610.2 Cucumis melo HOM05D006669 ORTHO05D008440 7.1e-29 130.6 91 65.9
Peaxi162Scf01526g00017 Petunia axillaris HOM05D006669 ORTHO05D008440 7.1e-29 130.6 97 63.9
BcaC01g00401 Brassica carinata HOM05D006669 ORTHO05D008440 1.2e-28 129.8 98 64.3
A08p22660 Brassica napus HOM05D006669 ORTHO05D008440 1.2e-28 129.8 98 64.3
BolC3t20175H Brassica oleracea HOM05D006669 ORTHO05D008440 1.2e-28 129.8 98 64.3
BraA08t34233Z Brassica rapa HOM05D006669 ORTHO05D008440 1.2e-28 129.8 98 64.3
Sopen02g014840 Solanum pennellii HOM05D006669 ORTHO05D008440 1.2e-28 129.8 97 64.9
PGSC0003DMG402013020 Solanum tuberosum HOM05D006669 ORTHO05D008440 2.1e-28 129.0 97 63.9
AUR62040277 Chenopodium quinoa HOM05D006669 ORTHO05D008440 2.7e-28 128.6 94 66.0
CsaV3_6G043850 Cucumis sativus L. HOM05D006669 ORTHO05D008440 3.5e-28 128.3 90 65.6
CARHR245880 Cardamine hirsuta HOM05D006669 ORTHO05D008440 4.6e-28 127.9 98 63.3
Solyc02g064740.3 Solanum lycopersicum HOM05D006669 ORTHO05D008440 1.7e-27 125.9 97 62.9
C03p79320 Brassica napus HOM05D006669 ORTHO05D008440 2.3e-27 125.6 98 62.2
ClCG01G017320 Citrullus lanatus HOM05D006669 ORTHO05D008440 3.0e-27 125.2 96 61.5
Sed0019482 Sechium edule HOM05D006669 ORTHO05D008440 1.9e-26 122.5 84 64.3
ATR0030G057 Amborella trichopoda HOM05D006669 ORTHO05D008440 3.3e-26 121.7 97 56.7
Zm00001eb214300 Zea mays HOM05D006669 ORTHO05D008440 2.1e-25 119.0 82 64.6
SEGI_27298 Sequoiadendron giganteum HOM05D006669 ORTHO05D008440 2.7e-20 102.1 84 58.3
Os03g0761700 Oryza sativa ssp. japonica HOM05D006669 ORTHO05D008440 1.6e-17 92.8 63 61.9
HPP92_000757 Vanilla planifolia HOM05D006669 ORTHO05D008440 3.6e-17 91.7 63 52.4
Glyma.01G216100 Glycine max HOM05D006669 ORTHO05D008440 4.8e-17 91.3 68 60.3
Mapoly0045s0047 Marchantia polymorpha HOM05D006669 ORTHO05D008440 5.8e-15 84.3 95 44.2
AagrBONN_evm.TU.Sc2ySwM_228.5150 Anthoceros agrestis HOM05D006669 ORTHO05D008440 2.0e-07 59.3 72 40.3


User provided reference genes

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