Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0214941 Helianthus annuus HOM05D006962 ORTHO05D008696 2.3e-85 318.9 170 100.0
ECA234G1956 Erigeron canadensis HOM05D006962 ORTHO05D008696 9.5e-31 137.5 145 53.8
Lsat_1_v5_gn_4_641 Lactuca sativa HOM05D006962 ORTHO05D008696 3.6e-30 135.6 200 46.5
Solyc05g015640.3 Solanum lycopersicum HOM05D006962 ORTHO05D008696 9.2e-26 120.9 150 45.3
Sopen05g011100 Solanum pennellii HOM05D006962 ORTHO05D008696 9.2e-26 120.9 150 45.3
Peaxi162Scf00128g01332 Petunia axillaris HOM05D006962 ORTHO05D008696 1.0e-24 117.5 165 43.0
PGSC0003DMG400034312 Solanum tuberosum HOM05D006962 ORTHO05D008696 1.0e-24 117.5 182 41.8
Nitab4.5_0006369g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 1.7e-24 116.7 207 38.2
Nitab4.5_0000996g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 2.3e-24 116.3 145 44.8
QL03p052240 Quercus lobata HOM05D006962 ORTHO05D008696 5.1e-24 115.2 206 40.8
TWI75G0385 Tripterygium wilfordii HOM05D006962 ORTHO05D008696 3.6e-22 109.0 190 38.9
Manes.13G010300 Manihot esculenta HOM05D006962 ORTHO05D008696 1.1e-21 107.5 194 39.2
Gohir.D04G183600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 5.2e-21 105.1 202 35.1
Gohir.A04G140400 Gossypium hirsutum HOM05D006962 ORTHO05D008696 6.9e-21 104.8 202 34.7
CiPaw.05G108100 Carya illinoinensis HOM05D006962 ORTHO05D008696 1.5e-20 103.6 208 38.5
Sc14g0009120 Simmondsia chinensis HOM05D006962 ORTHO05D008696 2.0e-20 103.2 188 39.4
CSS0033119 Camellia sinensis var. sinensis HOM05D006962 ORTHO05D008696 2.6e-20 102.8 218 38.1
Gorai.012G176600 Gossypium raimondii HOM05D006962 ORTHO05D008696 3.4e-20 102.4 202 34.7
ClCG06G002190 Citrullus lanatus HOM05D006962 ORTHO05D008696 4.4e-20 102.1 136 45.6
VMungo1383G1469 Vigna mungo HOM05D006962 ORTHO05D008696 4.4e-20 102.1 116 50.0
Cc11_g17050 Coffea canephora HOM05D006962 ORTHO05D008696 7.6e-20 101.3 161 38.5
Thecc.02G205200 Theobroma cacao HOM05D006962 ORTHO05D008696 1.3e-19 100.5 205 36.1
MSTRG.13306 Avicennia marina HOM05D006962 ORTHO05D008696 1.7e-19 100.1 143 42.0
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 4.9e-19 98.6 128 42.2
arahy.Tifrunner.gnm1.ann1.AWLH2F Arachis hypogaea HOM05D006962 ORTHO05D008696 6.4e-19 98.2 147 40.1
Potri.001G057700 Populus trichocarpa HOM05D006962 ORTHO05D008696 6.4e-19 98.2 156 44.2
COL.COLO4_20424 Corchorus olitorius HOM05D006962 ORTHO05D008696 1.1e-18 97.4 196 35.7
MELO3C022311.2 Cucumis melo HOM05D006962 ORTHO05D008696 1.1e-18 97.4 148 42.6
Ciclev10032798m.g Citrus clementina HOM05D006962 ORTHO05D008696 1.9e-18 96.7 204 35.8
Dinv17575 Davidia involucrata HOM05D006962 ORTHO05D008696 1.9e-18 96.7 216 36.1
PGR102G1052 Punica granatum HOM05D006962 ORTHO05D008696 1.9e-18 96.7 164 40.9
Phvul.001G262900 Phaseolus vulgaris HOM05D006962 ORTHO05D008696 2.4e-18 96.3 103 50.5
GSVIVG01010505001 Vitis vinifera HOM05D006962 ORTHO05D008696 2.4e-18 96.3 195 36.9
Prupe.1G224100 Prunus persica HOM05D006962 ORTHO05D008696 3.2e-18 95.9 204 34.8
CANSAT01G0828 Cannabis sativa HOM05D006962 ORTHO05D008696 4.2e-18 95.5 147 42.2
Gohir.D02G147600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 4.2e-18 95.5 184 36.4
Nn3g16434 Nelumbo nucifera HOM05D006962 ORTHO05D008696 5.4e-18 95.1 212 34.0
Atru.chr11.2343 Acer truncatum HOM05D006962 ORTHO05D008696 9.3e-18 94.4 135 40.0
CsaV3_6G008260 Cucumis sativus L. HOM05D006962 ORTHO05D008696 1.6e-17 93.6 136 43.4
Glyma.18G005200 Glycine max HOM05D006962 ORTHO05D008696 2.7e-17 92.8 136 39.7
Sabra01G0041700 Salix brachista HOM05D000660 ORTHO05D000766 2.7e-17 92.8 163 41.1
Duzib251G0823 Durio zibethinus HOM05D006962 ORTHO05D008696 3.5e-17 92.4 152 40.1
Gorai.005G165400 Gossypium raimondii HOM05D006962 ORTHO05D008696 3.5e-17 92.4 184 36.4
Gohir.A03G124600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 4.6e-17 92.0 184 35.9
PSO017G7099 Papaver somniferum HOM05D006962 ORTHO05D008696 6.0e-17 91.7 145 38.6
Actinidia08062 Actinidia chinensis HOM05D006962 ORTHO05D008696 7.8e-17 91.3 176 37.5
Psat5g097440 Pisum sativum HOM05D006962 ORTHO05D008696 7.8e-17 91.3 114 44.7
PSO478G2808 Papaver somniferum HOM05D006962 ORTHO05D008696 1.3e-16 90.5 145 37.9
Medtr3g085060 Medicago truncatula HOM05D006962 ORTHO05D008696 3.0e-16 89.4 142 38.0
TPR.G17769 Trifolium pratense HOM05D006962 ORTHO05D008696 3.0e-16 89.4 113 40.7
Cfa009377 Carpinus fangiana HOM05D006962 ORTHO05D008696 5.1e-16 88.6 204 33.8
Ca_16448_v3 Cicer arietinum L. HOM05D006962 ORTHO05D008696 5.1e-16 88.6 132 40.2
Potri.003G170700 Populus trichocarpa HOM05D006962 ORTHO05D008696 5.1e-16 88.6 193 36.3
TAR629G1477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 5.1e-16 88.6 204 36.3
Lj6g0020338 Lotus japonicus HOM05D006962 ORTHO05D008696 6.6e-16 88.2 146 37.7
Rhsim12G0024900 Rhododendron simsii HOM05D006962 ORTHO05D008696 8.7e-16 87.8 111 44.1
Eucgr.B03508 Eucalyptus grandis HOM05D006962 ORTHO05D008696 1.1e-15 87.4 112 42.9
FvH4_4g23570 Fragaria vesca HOM05D006962 ORTHO05D008696 1.1e-15 87.4 204 32.4
Haze_12436 Corylus avellana HOM05D006962 ORTHO05D008696 1.9e-15 86.7 160 37.5
Hma1.2p1_0657F.1_g197165 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 1.9e-15 86.7 113 44.2
Hma1.2p1_0967F.1_g242360 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 1.9e-15 86.7 113 44.2
Sed0011154 Sechium edule HOM05D006962 ORTHO05D008696 2.5e-15 86.3 155 37.4
ClCG07G015460 Citrullus lanatus HOM05D006962 ORTHO05D008696 7.3e-15 84.7 202 33.7
Lalb_Chr23g0278151 Lupinus albus HOM05D006962 ORTHO05D008696 7.3e-15 84.7 155 37.4
Migut.E00010 Erythranthe guttata HOM05D006962 ORTHO05D008696 9.6e-15 84.3 161 34.8
MBI07_g11269_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 9.6e-15 84.3 197 33.0
MBI07_g28246_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 9.6e-15 84.3 200 32.5
THA.LOC104807506 Tarenaya hassleriana HOM05D006962 ORTHO05D008696 9.6e-15 84.3 215 33.0
RcHm_v2.0_Chr4g0429971 Rosa chinensis HOM05D006962 ORTHO05D008696 1.3e-14 84.0 145 39.3
CDE05G3434 Ceratophyllum demersum HOM05D006962 ORTHO05D008696 2.8e-14 82.8 128 39.1
AUR62028912 Chenopodium quinoa HOM05D006962 ORTHO05D008696 2.8e-14 82.8 163 35.6
MELO3C032628.2 Cucumis melo HOM05D006962 ORTHO05D008696 2.8e-14 82.8 126 42.9
CsaV3_4G003050 Cucumis sativus L. HOM05D006962 ORTHO05D008696 6.2e-14 81.6 191 34.0
C05p26000 Brassica napus HOM05D006962 ORTHO05D008696 1.1e-13 80.9 148 39.2
BcaC05g26736 Brassica carinata HOM05D006962 ORTHO05D008696 1.4e-13 80.5 152 38.8
AUR62005637 Chenopodium quinoa HOM05D006962 ORTHO05D008696 1.8e-13 80.1 162 35.2
Glyma.11G251800 Glycine max HOM05D006962 ORTHO05D008696 2.4e-13 79.7 80 55.0
BolC5t31319H Brassica oleracea HOM05D006962 ORTHO05D008696 3.1e-13 79.3 148 38.5
Sabra03G0124800 Salix brachista HOM05D006962 ORTHO05D008696 3.1e-13 79.3 192 31.8
SGA_v2.0_scaffold87G27164 Striga asiatica HOM05D006962 ORTHO05D008696 5.3e-13 78.6 137 37.2
TAR636G2109 Trochodendron aralioides HOM05D006962 ORTHO05D008696 5.3e-13 78.6 151 40.4
BcaC05g26545 Brassica carinata HOM05D006962 ORTHO05D008696 6.9e-13 78.2 148 37.8
C07p17910 Brassica napus HOM05D006962 ORTHO05D008696 9.0e-13 77.8 148 38.5
Thhalv10008828m.g Eutrema salsugineum HOM05D006962 ORTHO05D008696 9.0e-13 77.8 187 34.2
BolC7t42297H Brassica oleracea HOM05D006962 ORTHO05D008696 1.2e-12 77.4 148 38.5
Hund25473 Selenicereus undatus HOM05D006962 ORTHO05D008696 1.2e-12 77.4 182 32.4
Ah.03g136040 Amaranthus hybridus HOM05D006962 ORTHO05D008696 1.5e-12 77.0 173 31.8
AL1G40700 Arabidopsis lyrata HOM05D006962 ORTHO05D008696 1.5e-12 77.0 147 38.8
Gohir.D03G043133 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.5e-12 77.0 62 53.2
DCAR_007000 Daucus carota HOM05D006962 ORTHO05D008696 2.0e-12 76.6 163 35.6
A09p38640 Brassica napus HOM05D006962 ORTHO05D008696 2.6e-12 76.3 152 37.5
BraA09t39370Z Brassica rapa HOM05D006962 ORTHO05D008696 2.6e-12 76.3 152 37.5
Sp1g23540 Schrenkiella parvula HOM05D006962 ORTHO05D008696 2.6e-12 76.3 204 32.4
Aqoxy3G01577 Aquilegia oxysepala HOM05D006962 ORTHO05D008696 5.8e-12 75.1 116 44.0
Cpa.g.sc43.75 Carica papaya HOM05D006962 ORTHO05D008696 7.6e-12 74.7 165 34.5
BcaNung06812 Brassica carinata HOM05D006962 ORTHO05D008696 1.3e-11 73.9 168 35.1
A07p11980 Brassica napus HOM05D006962 ORTHO05D008696 1.7e-11 73.6 209 32.5
MD16G1121100 Malus domestica HOM05D006962 ORTHO05D008696 1.7e-11 73.6 214 30.8
TAR629G0477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 1.7e-11 73.6 80 56.2
ATR0561G196 Amborella trichopoda HOM05D006962 ORTHO05D008696 2.9e-11 72.8 118 33.9
BraA07t28983Z Brassica rapa HOM05D006962 ORTHO05D008696 3.8e-11 72.4 208 31.2
HPP92_023534 Vanilla planifolia HOM05D006962 ORTHO05D008696 3.8e-11 72.4 168 35.1
Gorai.003G044100 Gossypium raimondii HOM05D006962 ORTHO05D008696 4.9e-11 72.0 62 53.2
Aa31LG7G9900 Aethionema arabicum HOM05D006962 ORTHO05D008696 6.4e-11 71.6 146 36.3
CARHR026870 Cardamine hirsuta HOM05D006962 ORTHO05D008696 6.4e-11 71.6 181 33.1
Zm00001eb241800 Zea mays HOM05D006962 ORTHO05D008696 5.4e-10 68.6 198 27.3
BcaB03g14005 Brassica carinata HOM05D006962 ORTHO05D008696 9.3e-10 67.8 168 33.3
Zm00001eb180910 Zea mays HOM05D006962 ORTHO05D008696 1.2e-09 67.4 189 29.6
Os02g0509600 Oryza sativa ssp. japonica HOM05D006962 ORTHO05D008696 5.1e-08 62.0 189 25.9
Carub.0001s2583 Capsella rubella HOM05D006962 ORTHO05D008696 6.7e-08 61.6 174 32.8
AT1G27300 Arabidopsis thaliana HOM05D006962 ORTHO05D008696 2.8e-06 56.2 155 32.3


User provided reference genes

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