Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0212181 Helianthus annuus HOM05D006309 ORTHO05D007937 2.1e-48 195.3 92 100.0
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 4.4e-46 187.6 89 96.6
ECA233G1704 Erigeron canadensis HOM05D006309 ORTHO05D007937 2.8e-45 184.9 91 94.5
arahy.Tifrunner.gnm1.ann1.RC3JIS Arachis hypogaea HOM05D006309 ORTHO05D007937 1.0e-42 176.4 91 86.8
arahy.Tifrunner.gnm1.ann1.P9U7KY Arachis hypogaea HOM05D006309 ORTHO05D007937 2.2e-42 175.3 91 85.7
arahy.Tifrunner.gnm1.ann1.VGN228 Arachis hypogaea HOM05D006309 ORTHO05D007937 2.2e-42 175.3 91 85.7
Ca_10200_v3 Cicer arietinum L. HOM05D006309 ORTHO05D007937 6.5e-42 173.7 91 83.5
Psat6g155680 Pisum sativum HOM05D006309 ORTHO05D007937 6.5e-42 173.7 90 84.4
Solyc03g098120.3 Solanum lycopersicum HOM05D006309 ORTHO05D007937 6.5e-42 173.7 90 86.7
Sopen03g028820 Solanum pennellii HOM05D006309 ORTHO05D007937 6.5e-42 173.7 90 86.7
Oeu061901.1 Olea europaea HOM05D006309 ORTHO05D007937 8.5e-42 173.3 92 87.0
CAN.G637.25 Capsicum annuum HOM05D006309 ORTHO05D007937 1.1e-41 172.9 90 87.8
Cc02_g35850 Coffea canephora HOM05D006309 ORTHO05D007937 1.1e-41 172.9 91 85.7
PGSC0003DMG400031051 Solanum tuberosum HOM05D006309 ORTHO05D007937 1.1e-41 172.9 90 86.7
Peaxi162Scf00171g00731 Petunia axillaris HOM05D006309 ORTHO05D007937 1.4e-41 172.6 90 86.7
Rhsim11G0105200 Rhododendron simsii HOM05D006309 ORTHO05D007937 1.9e-41 172.2 91 85.7
vmacro16416 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 1.9e-41 172.2 91 85.7
VMungo0720G0633 Vigna mungo HOM05D006309 ORTHO05D007937 1.9e-41 172.2 90 85.6
Rhsim11G0104500 Rhododendron simsii HOM05D006309 ORTHO05D007937 2.5e-41 171.8 91 85.7
Lalb_Chr02g0147551 Lupinus albus HOM05D006309 ORTHO05D007937 3.2e-41 171.4 91 82.4
Nitab4.5_0000936g0050 Nicotiana tabacum HOM05D006309 ORTHO05D007937 3.2e-41 171.4 90 85.6
Cpa.g.sc48.50 Carica papaya HOM05D006309 ORTHO05D007937 4.2e-41 171.0 92 84.8
Lalb_Chr21g0310061 Lupinus albus HOM05D006309 ORTHO05D007937 4.2e-41 171.0 91 82.4
Phvul.007G205000 Phaseolus vulgaris HOM05D006309 ORTHO05D007937 4.2e-41 171.0 90 85.6
Medtr1g484930 Medicago truncatula HOM05D006309 ORTHO05D007937 5.5e-41 170.6 91 81.3
Prupe.6G304700 Prunus persica HOM05D006309 ORTHO05D007937 5.5e-41 170.6 88 86.4
Dinv24513 Davidia involucrata HOM05D006309 ORTHO05D007937 7.2e-41 170.2 91 84.6
Nitab4.5_0004454g0020 Nicotiana tabacum HOM05D006309 ORTHO05D007937 9.4e-41 169.9 90 84.4
ATR0796G010 Amborella trichopoda HOM05D006309 ORTHO05D007937 2.7e-40 168.3 90 84.4
Manes.09G181100 Manihot esculenta HOM05D006309 ORTHO05D007937 2.7e-40 168.3 88 86.4
Ah.06g190700 Amaranthus hybridus HOM05D006309 ORTHO05D007937 3.6e-40 167.9 91 83.5
Glyma.20G090800 Glycine max HOM05D006309 ORTHO05D007937 3.6e-40 167.9 91 81.3
Glyma.20G092200 Glycine max HOM05D006309 ORTHO05D007937 3.6e-40 167.9 91 81.3
TPR.G2591 Trifolium pratense HOM05D006309 ORTHO05D007937 3.6e-40 167.9 91 79.1
AUR62000475 Chenopodium quinoa HOM05D006309 ORTHO05D007937 6.1e-40 167.2 91 81.3
Duzib205G1677 Durio zibethinus HOM05D006309 ORTHO05D007937 6.1e-40 167.2 92 81.5
Migut.H01672 Erythranthe guttata HOM05D006309 ORTHO05D007937 6.1e-40 167.2 92 82.6
MD12G1199900 Malus domestica HOM05D006309 ORTHO05D007937 6.1e-40 167.2 92 81.5
Hund05518 Selenicereus undatus HOM05D006309 ORTHO05D007937 6.1e-40 167.2 91 84.6
vmacro01669 Vaccinium macrocarpon HOM05D006309 ORTHO05D007937 6.1e-40 167.2 92 83.7
Ciclev10013195m.g Citrus clementina HOM05D006309 ORTHO05D007937 7.9e-40 166.8 90 84.4
Nn7g36656 Nelumbo nucifera HOM05D006309 ORTHO05D007937 7.9e-40 166.8 90 83.3
QL03p010963 Quercus lobata HOM05D006309 ORTHO05D007937 1.0e-39 166.4 88 84.1
Lj5g0003279 Lotus japonicus HOM05D006309 ORTHO05D007937 1.4e-39 166.0 91 82.4
SalBow5G3054 Salvia bowleyana HOM05D006309 ORTHO05D007937 1.8e-39 165.6 92 81.5
Actinidia22855 Actinidia chinensis HOM05D006309 ORTHO05D007937 2.3e-39 165.2 90 81.1
Gohir.D08G174300 Gossypium hirsutum HOM05D006309 ORTHO05D007937 2.3e-39 165.2 90 81.1
Gorai.004G182000 Gossypium raimondii HOM05D006309 ORTHO05D007937 2.3e-39 165.2 90 81.1
CSS0019637 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 3.9e-39 164.5 90 82.2
CSS0033999 Camellia sinensis var. sinensis HOM05D006309 ORTHO05D007937 3.9e-39 164.5 90 82.2
Gohir.A08G153400 Gossypium hirsutum HOM05D006309 ORTHO05D007937 5.2e-39 164.1 90 81.1
Atru.chr12.1543 Acer truncatum HOM05D006309 ORTHO05D007937 8.8e-39 163.3 89 82.0
CDE09G0003 Ceratophyllum demersum HOM05D006309 ORTHO05D007937 8.8e-39 163.3 87 78.2
FvH4_6g08490 Fragaria vesca HOM05D006309 ORTHO05D007937 8.8e-39 163.3 91 80.2
FAN02G0285 Fragaria x ananassa HOM05D006309 ORTHO05D007937 8.8e-39 163.3 91 80.2
FAN05G1622 Fragaria x ananassa HOM05D006309 ORTHO05D007937 8.8e-39 163.3 91 80.2
FAN09G1610 Fragaria x ananassa HOM05D006309 ORTHO05D007937 8.8e-39 163.3 91 80.2
FAN14G3239 Fragaria x ananassa HOM05D006309 ORTHO05D007937 8.8e-39 163.3 91 80.2
BcaB07g31141 Brassica carinata HOM05D006309 ORTHO05D007937 1.5e-38 162.5 91 79.1
BcaC04g22081 Brassica carinata HOM05D006309 ORTHO05D007937 1.5e-38 162.5 91 79.1
C09p23680 Brassica napus HOM05D006309 ORTHO05D007937 1.5e-38 162.5 91 79.1
BraA09t37510Z Brassica rapa HOM05D006309 ORTHO05D007937 1.5e-38 162.5 91 79.1
CiPaw.04G111200 Carya illinoinensis HOM05D006309 ORTHO05D007937 1.5e-38 162.5 92 79.3
PGR083G2709 Punica granatum HOM05D006309 ORTHO05D007937 1.5e-38 162.5 91 82.4
CARHR288700 Cardamine hirsuta HOM05D006309 ORTHO05D007937 2.0e-38 162.2 90 78.9
AL1G67090 Arabidopsis lyrata HOM05D006309 ORTHO05D007937 2.6e-38 161.8 90 78.9
Carub.0002s0712 Capsella rubella HOM05D006309 ORTHO05D007937 2.6e-38 161.8 90 78.9
TWI36G0052 Tripterygium wilfordii HOM05D006309 ORTHO05D007937 2.6e-38 161.8 90 80.0
BolC9t55290H Brassica oleracea HOM05D006309 ORTHO05D007937 3.3e-38 161.4 91 78.0
Sc16g0009400 Simmondsia chinensis HOM05D006309 ORTHO05D007937 3.3e-38 161.4 91 79.1
TAR636G2194 Trochodendron aralioides HOM05D006309 ORTHO05D007937 3.3e-38 161.4 87 81.6
FvH4_2g19190 Fragaria vesca HOM05D006309 ORTHO05D007937 4.4e-38 161.0 91 79.1
FAN24G3038 Fragaria x ananassa HOM05D006309 ORTHO05D007937 4.4e-38 161.0 91 79.1
RcHm_v2.0_Chr3g0458531 Rosa chinensis HOM05D006309 ORTHO05D007937 4.4e-38 161.0 91 79.1
Sp1g28800 Schrenkiella parvula HOM05D006309 ORTHO05D007937 4.4e-38 161.0 91 78.0
AT1G57540 Arabidopsis thaliana HOM05D006309 ORTHO05D007937 5.7e-38 160.6 90 77.8
A09p18900 Brassica napus HOM05D006309 ORTHO05D007937 5.7e-38 160.6 90 78.9
THA.LOC104820476 Tarenaya hassleriana HOM05D006309 ORTHO05D007937 5.7e-38 160.6 88 77.3
Aa31LG2G11310 Aethionema arabicum HOM05D006309 ORTHO05D007937 7.4e-38 160.2 91 76.9
CiPaw.07G036200 Carya illinoinensis HOM05D006309 ORTHO05D007937 7.4e-38 160.2 90 80.0
AUR62017099 Chenopodium quinoa HOM05D006309 ORTHO05D007937 7.4e-38 160.2 91 79.1
Thhalv10010969m.g Eutrema salsugineum HOM05D006309 ORTHO05D007937 7.4e-38 160.2 90 77.8
Potri.005G002900 Populus trichocarpa HOM05D006309 ORTHO05D007937 7.4e-38 160.2 92 80.4
Sp2g05970 Schrenkiella parvula HOM05D006309 ORTHO05D007937 7.4e-38 160.2 91 76.9
GSVIVG01031328001 Vitis vinifera HOM05D006309 ORTHO05D007937 9.7e-38 159.8 92 77.2
arahy.Tifrunner.gnm1.ann1.01IKZ7 Arachis hypogaea HOM05D006309 ORTHO05D007937 1.3e-37 159.5 124 63.7
ClCG02G014650 Citrullus lanatus HOM05D006309 ORTHO05D007937 1.3e-37 159.5 90 78.9
Haze_03988 Corylus avellana HOM05D006309 ORTHO05D007937 1.3e-37 159.5 90 80.0
Sed0021183 Sechium edule HOM05D006309 ORTHO05D007937 1.3e-37 159.5 91 79.1
Thecc.03G310900 Theobroma cacao HOM05D006309 ORTHO05D007937 1.3e-37 159.5 92 77.2
CANSAT54G2801 Cannabis sativa HOM05D006309 ORTHO05D007937 2.2e-37 158.7 92 78.3
Hma1.2p1_0759F.1_g213920 Hydrangea macrophylla HOM05D006309 ORTHO05D007937 2.8e-37 158.3 86 80.2
Os01g0250600 Oryza sativa ssp. japonica HOM05D006309 ORTHO05D007937 2.8e-37 158.3 88 79.5
Sc09g0002420 Simmondsia chinensis HOM05D006309 ORTHO05D007937 2.8e-37 158.3 91 76.9
EL10Ac4g09558 Beta vulgaris HOM05D006309 ORTHO05D007937 3.7e-37 157.9 89 82.0
MELO3C004152.2 Cucumis melo HOM05D006309 ORTHO05D007937 8.2e-37 156.8 91 76.9
FAN15G2822 Fragaria x ananassa HOM05D006309 ORTHO05D007937 8.2e-37 156.8 91 76.9
CsaV3_2G007320 Cucumis sativus L. HOM05D006309 ORTHO05D007937 4.1e-36 154.5 91 76.9
unitig_62.g23615 Utricularia gibba HOM05D006309 ORTHO05D007937 1.6e-35 152.5 92 73.9
Aqoxy2G02488 Aquilegia oxysepala HOM05D006309 ORTHO05D007937 2.0e-35 152.1 90 71.1
Lj4g0016187 Lotus japonicus HOM05D006309 ORTHO05D007937 3.5e-35 151.4 91 75.8
DCAR_007528 Daucus carota HOM05D006309 ORTHO05D007937 1.7e-34 149.1 107 65.4
SalBow4G0401 Salvia bowleyana HOM05D006309 ORTHO05D007937 1.7e-34 149.1 115 64.3
SalBow4G1963 Salvia bowleyana HOM05D006309 ORTHO05D007937 1.7e-34 149.1 115 64.3
SalBow4G2407 Salvia bowleyana HOM05D006309 ORTHO05D007937 1.7e-34 149.1 115 64.3
Sabra13G0001700 Salix brachista HOM05D006309 ORTHO05D007937 2.2e-34 148.7 110 67.3
Prupe.8G045300 Prunus persica HOM05D006309 ORTHO05D007937 3.8e-34 147.9 88 76.1
PSO210G0390 Papaver somniferum HOM05D006309 ORTHO05D007937 1.1e-33 146.4 89 73.0
PSO761G0726 Papaver somniferum HOM05D006309 ORTHO05D007937 1.1e-33 146.4 89 73.0
Sabra05G0000300 Salix brachista HOM05D006309 ORTHO05D007937 2.7e-32 141.7 135 55.6
Sabra05G0014400 Salix brachista HOM05D006309 ORTHO05D007937 2.7e-32 141.7 135 55.6
Cfa012394 Carpinus fangiana HOM05D006309 ORTHO05D007937 2.0e-30 135.6 77 76.6
EL10Ac4g07573 Beta vulgaris HOM05D006309 ORTHO05D007937 1.3e-29 132.9 91 70.3
Dinv30948 Davidia involucrata HOM05D006309 ORTHO05D007937 1.7e-29 132.5 73 80.8
MBI18_g10373_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 2.0e-27 125.6 91 67.0
HanXRQChr06g0180851 Helianthus annuus HOM05D006309 ORTHO05D007937 7.0e-20 100.5 45 100.0
HanXRQChr16g0506271 Helianthus annuus HOM05D006309 ORTHO05D007937 7.0e-20 100.5 45 100.0
Mapoly0075s0044 Marchantia polymorpha HOM05D006309 ORTHO05D007937 9.1e-20 100.1 89 50.6
Pp3c8_1240 Physcomitrium patens HOM05D006309 ORTHO05D007937 2.9e-18 95.1 89 48.3
Glyma.09G093300 Glycine max HOM05D006309 ORTHO05D000504 8.8e-15 83.6 44 77.3
DCAR_029292 Daucus carota HOM05D002465 ORTHO05D005308 1.5e-14 82.8 44 77.3
Zm00001eb239560 Zea mays HOM05D006309 ORTHO05D007937 3.4e-14 81.6 44 75.0
MBI06_g06498_MAGBIO Magnolia biondii HOM05D006309 ORTHO05D007937 7.5e-14 80.5 54 66.7
COL.COLO4_16932 Corchorus olitorius HOM05D006309 ORTHO05D007937 1.3e-13 79.7 48 75.0
BNapus_Darmor_BZH_scaffold_223p00020 Brassica napus HOM05D006309 ORTHO05D007937 2.8e-08 62.0 34 79.4
Potri.013G002301 Populus trichocarpa HOM05D006309 ORTHO05D007937 8.0e-08 60.5 36 75.0


User provided reference genes

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