Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0211981 Helianthus annuus HOM05D001200 ORTHO05D002731 5.5e-44 180.6 96 100.0
HanXRQChr00c0196g0572481 Helianthus annuus HOM05D001200 ORTHO05D002731 2.6e-33 145.2 78 100.0
HanXRQChr00c0690g0576761 Helianthus annuus HOM05D001200 ORTHO05D002731 2.6e-33 145.2 78 100.0
HanXRQChr02g0059711 Helianthus annuus HOM05D001200 ORTHO05D002731 2.6e-33 145.2 78 100.0
HanXRQChr03g0073091 Helianthus annuus HOM05D001200 ORTHO05D002731 2.6e-33 145.2 78 100.0
HanXRQChr05g0152431 Helianthus annuus HOM05D001200 ORTHO05D002731 2.6e-33 145.2 78 100.0
HanXRQChr06g0183001 Helianthus annuus HOM05D001200 ORTHO05D002731 2.6e-33 145.2 78 100.0
HanXRQChr09g0258521 Helianthus annuus HOM05D001200 ORTHO05D002731 2.6e-33 145.2 78 100.0
HanXRQChr11g0323741 Helianthus annuus HOM05D001200 ORTHO05D002731 2.6e-33 145.2 78 100.0
HanXRQCPg0580351 Helianthus annuus HOM05D001200 ORTHO05D002731 2.6e-33 145.2 78 100.0
BolC2t10611H Brassica oleracea HOM05D001200 ORTHO05D002731 2.3e-29 132.1 96 75.0
HanXRQChr00c0894g0577811 Helianthus annuus HOM05D001200 ORTHO05D002731 4.3e-28 127.9 81 86.4
HanXRQChr01g0020071 Helianthus annuus HOM05D001200 ORTHO05D002731 5.6e-28 127.5 96 77.1
Solyc11g021213.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 7.3e-28 127.1 85 78.8
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 9.5e-28 126.7 78 84.6
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 2.8e-27 125.2 77 87.0
DCAR_032536 Daucus carota HOM05D001200 ORTHO05D002731 3.6e-27 124.8 78 84.6
Gohir.1Z049731 Gossypium hirsutum HOM05D001200 ORTHO05D002731 3.6e-27 124.8 77 85.7
Gohir.A02G134201 Gossypium hirsutum HOM05D001200 ORTHO05D010401 3.6e-27 124.8 77 85.7
Peaxi162Scf00030g02118 Petunia axillaris HOM05D001200 ORTHO05D002731 1.1e-26 123.2 74 87.8
Peaxi162Scf01164g00035 Petunia axillaris HOM05D001200 ORTHO05D002731 1.1e-26 123.2 74 87.8
SalBow1G7634 Salvia bowleyana HOM05D001200 ORTHO05D002731 1.1e-26 123.2 77 83.1
Medtr0002s0170 Medicago truncatula HOM05D001200 ORTHO05D002731 1.8e-26 122.5 76 84.2
Gohir.A01G143400 Gossypium hirsutum HOM05D001200 ORTHO05D002731 3.1e-26 121.7 77 84.4
Ciclev10013974m.g Citrus clementina HOM05D001200 ORTHO05D002731 8.9e-26 120.2 77 81.8
Ciclev10027631m.g Citrus clementina HOM05D001200 ORTHO05D002731 8.9e-26 120.2 77 81.8
Ciclev10027650m.g Citrus clementina HOM05D001200 ORTHO05D002731 8.9e-26 120.2 77 81.8
RcHm_v2.0_Chr5g0017231 Rosa chinensis HOM05D001200 ORTHO05D002731 8.9e-26 120.2 76 82.9
EL10As15g24100 Beta vulgaris HOM05D001200 ORTHO05D002731 1.2e-25 119.8 76 84.2
EL10As15g24137 Beta vulgaris HOM05D001200 ORTHO05D002731 1.2e-25 119.8 76 84.2
RcHm_v2.0_Chr5g0043051 Rosa chinensis HOM05D001200 ORTHO05D002731 1.2e-25 119.8 76 81.6
PGSC0003DMG400020539 Solanum tuberosum HOM05D001200 ORTHO05D002731 2.0e-25 119.0 74 83.8
PGSC0003DMG401011339 Solanum tuberosum HOM05D001200 ORTHO05D002731 2.0e-25 119.0 74 83.8
Migut.D01384 Erythranthe guttata HOM05D001200 ORTHO05D002731 7.5e-25 117.1 93 68.8
Medtr4g006120 Medicago truncatula HOM05D001200 ORTHO05D002731 7.5e-25 117.1 77 80.5
Medtr4g050950 Medicago truncatula HOM05D001200 ORTHO05D002731 7.5e-25 117.1 77 80.5
Gorai.006G071400 Gossypium raimondii HOM05D001200 ORTHO05D002731 2.9e-24 115.2 77 80.5
Sed0012006 Sechium edule HOM05D001200 ORTHO05D002731 4.9e-24 114.4 76 81.6
BcaC03g16699 Brassica carinata HOM05D001200 ORTHO05D002731 4.1e-23 111.3 75 80.0
C09p24620 Brassica napus HOM05D001200 ORTHO05D002731 4.1e-23 111.3 75 80.0
BolSC29t60504H Brassica oleracea HOM05D001200 ORTHO05D002731 4.1e-23 111.3 75 80.0
BolSC35t60702H Brassica oleracea HOM05D001200 ORTHO05D002731 4.1e-23 111.3 75 80.0
BolSC37t60791H Brassica oleracea HOM05D001200 ORTHO05D002731 4.1e-23 111.3 75 80.0
BraSC179t45776Z Brassica rapa HOM05D001200 ORTHO05D002731 4.1e-23 111.3 75 80.0
BraSC59t46549Z Brassica rapa HOM05D001200 ORTHO05D002731 4.1e-23 111.3 75 80.0
Phvul.002G050301 Phaseolus vulgaris HOM05D001200 ORTHO05D002731 1.2e-22 109.8 77 76.6
CARHR282420 Cardamine hirsuta HOM05D001200 ORTHO05D002731 2.7e-22 108.6 75 78.7
C09p40370 Brassica napus HOM05D001200 ORTHO05D002731 4.6e-22 107.8 73 79.5
MD04G1189100 Malus domestica HOM05D001200 ORTHO05D002731 7.8e-22 107.1 70 84.3
Nitab4.5_0001342g0130 Nicotiana tabacum HOM05D001200 ORTHO05D002731 1.2e-19 99.8 74 74.3
Medtr7g021720 Medicago truncatula HOM05D001200 ORTHO05D002731 8.1e-19 97.1 61 82.0
Solyc01g065620.1 Solanum lycopersicum HOM05D001200 ORTHO05D010401 8.1e-19 97.1 79 67.1
TPR.G24765 Trifolium pratense HOM05D001200 ORTHO05D002731 1.9e-15 85.9 94 58.5
Oeu053979.1 Olea europaea HOM05D001200 ORTHO05D002731 2.4e-15 85.5 50 86.0
arahy.Tifrunner.gnm1.ann1.2QK9Z7 Arachis hypogaea HOM05D001200 ORTHO05D002731 3.2e-15 85.1 65 70.8
Lalb_Chr07g0191751 Lupinus albus HOM05D001200 ORTHO05D002731 5.4e-15 84.3 67 71.6
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 9.2e-15 83.6 60 78.3
Lalb_Chr16g0388551 Lupinus albus HOM05D001200 ORTHO05D002731 3.0e-13 78.6 56 78.6
HanXRQChr17g0557771 Helianthus annuus HOM05D001200 ORTHO05D002731 5.1e-13 77.8 43 97.7
Oeu012819.1 Olea europaea HOM05D001200 ORTHO05D002731 5.1e-13 77.8 50 76.0
Solyc01g065585.1 Solanum lycopersicum HOM05D001200 ORTHO05D002731 7.3e-12 73.9 59 71.2
Gorai.012G007400 Gossypium raimondii HOM05D001200 ORTHO05D010401 1.6e-11 72.8 41 87.8
GSVIVG01004976001 Vitis vinifera HOM05D001200 ORTHO05D010401 2.1e-11 72.4 41 87.8
Oeu048498.1 Olea europaea HOM05D001200 ORTHO05D010401 3.6e-11 71.6 41 85.4
RcHm_v2.0_CPg0502811 Rosa chinensis HOM05D001200 ORTHO05D010401 2.4e-10 68.9 41 82.9
HanXRQChr07g0204721 Helianthus annuus HOM05D001200 ORTHO05D002731 6.8e-10 67.4 47 76.6
Ciclev10030459m.g Citrus clementina HOM05D001200 ORTHO05D010401 2.6e-09 65.5 38 86.8
Migut.D01255 Erythranthe guttata HOM05D001200 ORTHO05D010401 3.4e-09 65.1 73 54.8
Hund29653 Selenicereus undatus HOM05D001200 ORTHO05D010401 3.4e-09 65.1 41 82.9
HanXRQChr00c0328g0573601 Helianthus annuus HOM05D001200 ORTHO05D002731 1.9e-07 59.3 32 100.0
C06p42250 Brassica napus HOM05D001200 ORTHO05D002731 4.2e-07 58.2 39 76.9
Gohir.A13G109925 Gossypium hirsutum HOM05D001200 ORTHO05D002731 9.3e-07 57.0 36 83.3
SMO086G0020 Selaginella moellendorffii HOM05D001200 ORTHO05D002731 9.3e-07 57.0 68 54.4


User provided reference genes

Program Settings