Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0211521 Helianthus annuus HOM05D003751 ORTHO05D004765 6.1e-74 282.0 331 100.0
Lsat_1_v5_gn_8_48161 Lactuca sativa HOM05D003751 ORTHO05D004765 4.2e-67 259.2 331 95.2
HanXRQChr12g0379561 Helianthus annuus HOM05D003751 ORTHO05D004765 4.8e-63 245.7 331 93.7
Lsat_1_v5_gn_4_12041 Lactuca sativa HOM05D003751 ORTHO05D004765 4.1e-62 242.7 331 92.4
Lj6A782T110 Lonicera japonica HOM05D003751 ORTHO05D004765 1.3e-60 237.7 331 91.8
ECA233G2546 Erigeron canadensis HOM05D003751 ORTHO05D004765 3.2e-59 233.0 324 93.5
Actinidia33247 Actinidia chinensis HOM05D003751 ORTHO05D004765 5.5e-59 232.3 321 93.1
Cpa.g.sc1.101 Carica papaya HOM05D003751 ORTHO05D004765 1.2e-58 231.1 325 92.0
CAN.G541.15 Capsicum annuum HOM05D003751 ORTHO05D004765 2.1e-58 230.3 325 92.0
Hma1.2p1_0357F.1_g134490 Hydrangea macrophylla HOM05D003751 ORTHO05D004765 2.1e-58 230.3 322 93.2
Solyc01g011040.3 Solanum lycopersicum HOM05D003751 ORTHO05D004765 2.1e-58 230.3 319 94.4
Sopen01g034040 Solanum pennellii HOM05D003751 ORTHO05D004765 2.1e-58 230.3 319 94.4
Manes.05G108200 Manihot esculenta HOM05D003751 ORTHO05D004765 2.7e-58 229.9 325 91.1
CiPaw.05G127300 Carya illinoinensis HOM05D003751 ORTHO05D004765 3.6e-58 229.6 320 93.8
RcHm_v2.0_Chr4g0438711 Rosa chinensis HOM05D003751 ORTHO05D004765 3.6e-58 229.6 322 93.5
PGSC0003DMG400004190 Solanum tuberosum HOM05D003751 ORTHO05D004765 8.0e-58 228.4 322 93.2
TAR622G0005 Trochodendron aralioides HOM05D003751 ORTHO05D004765 1.0e-57 228.0 324 88.6
COL.COLO4_36892 Corchorus olitorius HOM05D003751 ORTHO05D004765 1.4e-57 227.6 320 92.8
FAN22G1318 Fragaria x ananassa HOM05D003751 ORTHO05D004765 3.0e-57 226.5 328 93.0
FAN17G0137 Fragaria x ananassa HOM05D003751 ORTHO05D004765 4.0e-57 226.1 328 92.7
Rhsim12G0134600 Rhododendron simsii HOM05D003751 ORTHO05D004765 8.8e-57 224.9 335 80.9
QL03p071051 Quercus lobata HOM05D003751 ORTHO05D004765 2.0e-56 223.8 320 90.0
Gohir.A07G069400 Gossypium hirsutum HOM05D003751 ORTHO05D004765 2.6e-56 223.4 317 92.7
Cfa008900 Carpinus fangiana HOM05D003751 ORTHO05D004765 4.4e-56 222.6 320 92.5
Gorai.001G078000 Gossypium raimondii HOM05D003751 ORTHO05D004765 4.4e-56 222.6 317 92.4
Nitab4.5_0000720g0010 Nicotiana tabacum HOM05D003751 ORTHO05D004765 4.4e-56 222.6 322 91.9
Actinidia12325 Actinidia chinensis HOM05D003751 ORTHO05D004765 5.7e-56 222.2 325 91.1
GSVIVG01012205001 Vitis vinifera HOM05D003751 ORTHO05D004765 5.7e-56 222.2 331 90.3
Nitab4.5_0002832g0050 Nicotiana tabacum HOM05D003751 ORTHO05D004765 9.8e-56 221.5 318 92.8
Gohir.D07G073800 Gossypium hirsutum HOM05D003751 ORTHO05D004765 1.3e-55 221.1 317 92.4
MD13G1065200 Malus domestica HOM05D003751 ORTHO05D004765 1.3e-55 221.1 329 91.2
CANSAT80G0608 Cannabis sativa HOM05D003751 ORTHO05D004765 1.7e-55 220.7 315 92.4
CANSAT80G1362 Cannabis sativa HOM05D003751 ORTHO05D004765 1.7e-55 220.7 315 92.4
Phvul.002G081300 Phaseolus vulgaris HOM05D003751 ORTHO05D004765 1.7e-55 220.7 323 91.6
Medtr5g043800 Medicago truncatula HOM05D003751 ORTHO05D004765 2.2e-55 220.3 329 90.3
Prupe.1G283000 Prunus persica HOM05D003751 ORTHO05D004765 2.8e-55 219.9 329 91.2
Cc11_g12270 Coffea canephora HOM05D003751 ORTHO05D004765 3.7e-55 219.5 325 92.3
Migut.L01211 Erythranthe guttata HOM05D003751 ORTHO05D004765 3.7e-55 219.5 332 91.0
Manes.01G029800 Manihot esculenta HOM05D003751 ORTHO05D004765 3.7e-55 219.5 318 91.2
Sabra08G0070200 Salix brachista HOM05D003751 ORTHO05D004765 3.7e-55 219.5 325 89.5
CiPaw.06G090700 Carya illinoinensis HOM05D003751 ORTHO05D004765 4.9e-55 219.2 319 92.2
PSO063G1864 Papaver somniferum HOM05D003751 ORTHO05D004765 4.9e-55 219.2 318 92.5
Gohir.A12G180500 Gossypium hirsutum HOM05D003751 ORTHO05D004765 8.3e-55 218.4 327 87.8
arahy.Tifrunner.gnm1.ann1.V223R1 Arachis hypogaea HOM05D003751 ORTHO05D004765 1.1e-54 218.0 318 92.8
arahy.Tifrunner.gnm1.ann1.Y3WTJM Arachis hypogaea HOM05D003751 ORTHO05D004765 1.1e-54 218.0 318 92.8
Glyma.02G114800 Glycine max HOM05D003751 ORTHO05D004765 1.1e-54 218.0 322 91.0
Lalb_Chr17g0341071 Lupinus albus HOM05D003751 ORTHO05D004765 1.1e-54 218.0 322 91.6
VMungo1215G2610 Vigna mungo HOM05D003751 ORTHO05D004765 1.1e-54 218.0 316 92.7
Lj2g0008638 Lotus japonicus HOM05D003751 ORTHO05D004765 1.4e-54 217.6 329 89.7
Ca_04940_v3 Cicer arietinum L. HOM05D003751 ORTHO05D004765 1.8e-54 217.2 329 89.7
Ciclev10021138m.g Citrus clementina HOM05D003751 ORTHO05D004765 1.8e-54 217.2 317 92.1
CSS0038990 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 3.1e-54 216.5 336 80.7
Migut.E00057 Erythranthe guttata HOM05D003751 ORTHO05D004765 3.1e-54 216.5 326 90.5
TPR.G24438 Trifolium pratense HOM05D003751 ORTHO05D004765 3.1e-54 216.5 317 91.5
Psat2g128600 Pisum sativum HOM05D003751 ORTHO05D004765 4.1e-54 216.1 331 90.0
SGA_v2.0_scaffold36G14436 Striga asiatica HOM05D003751 ORTHO05D004765 4.1e-54 216.1 328 90.9
Thecc.03G096900 Theobroma cacao HOM05D003751 ORTHO05D004765 4.1e-54 216.1 319 92.2
MD16G1063500 Malus domestica HOM05D003751 ORTHO05D004765 5.4e-54 215.7 328 89.6
Lalb_Chr10g0098641 Lupinus albus HOM05D003751 ORTHO05D004765 7.0e-54 215.3 318 91.8
PGR102G2931 Punica granatum HOM05D003751 ORTHO05D004765 7.0e-54 215.3 331 89.4
Hund05853 Selenicereus undatus HOM05D003751 ORTHO05D004765 7.0e-54 215.3 317 90.2
Duzib205G0623 Durio zibethinus HOM05D003751 ORTHO05D004765 9.2e-54 214.9 319 89.3
Gorai.008G196500 Gossypium raimondii HOM05D003751 ORTHO05D004765 9.2e-54 214.9 327 89.3
Nn4g23361 Nelumbo nucifera HOM05D003751 ORTHO05D004765 9.2e-54 214.9 322 90.1
Ah.03g139090 Amaranthus hybridus HOM05D003751 ORTHO05D004765 1.2e-53 214.5 320 89.7
Potri.008G093400 Populus trichocarpa HOM05D003751 ORTHO05D004765 1.2e-53 214.5 325 88.6
SGA_v2.0_scaffold16G07765 Striga asiatica HOM05D003751 ORTHO05D004765 1.2e-53 214.5 328 90.5
Eucgr.B03173 Eucalyptus grandis HOM05D003751 ORTHO05D004765 1.6e-53 214.2 326 90.2
MSTRG.7761 Avicennia marina HOM05D003751 ORTHO05D004765 2.7e-53 213.4 326 90.5
Sc11g0002320 Simmondsia chinensis HOM05D003751 ORTHO05D004765 2.7e-53 213.4 318 88.7
Glyma.01G056300 Glycine max HOM05D003751 ORTHO05D004765 3.5e-53 213.0 329 89.4
Hund14089 Selenicereus undatus HOM05D003751 ORTHO05D004765 3.5e-53 213.0 318 88.4
Thhalv10004587m.g Eutrema salsugineum HOM05D003751 ORTHO05D004765 4.5e-53 212.6 316 92.4
THA.LOC104818332 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 4.5e-53 212.6 318 91.8
Nn3g17386 Nelumbo nucifera HOM05D003751 ORTHO05D004765 7.7e-53 211.8 322 89.8
Dinv34089 Davidia involucrata HOM05D003751 ORTHO05D004765 1.0e-52 211.5 299 95.3
Carub.0008s2191 Capsella rubella HOM05D003751 ORTHO05D004765 1.3e-52 211.1 316 92.1
Potri.010G160700 Populus trichocarpa HOM05D003751 ORTHO05D004765 1.3e-52 211.1 325 87.7
Sp2g24470 Schrenkiella parvula HOM05D003751 ORTHO05D004765 1.3e-52 211.1 317 91.8
TWI79G0662 Tripterygium wilfordii HOM05D003751 ORTHO05D004765 1.3e-52 211.1 329 90.6
AL8G37900 Arabidopsis lyrata HOM05D003751 ORTHO05D004765 1.7e-52 210.7 317 91.5
AT5G61240 Arabidopsis thaliana HOM05D003751 ORTHO05D004765 1.7e-52 210.7 317 91.5
Peaxi162Scf00097g00610 Petunia axillaris HOM05D003751 ORTHO05D004765 1.7e-52 210.7 339 62.2
BcaC06g33219 Brassica carinata HOM05D003751 ORTHO05D004765 3.8e-52 209.5 316 91.8
C07p44920 Brassica napus HOM05D003751 ORTHO05D004765 3.8e-52 209.5 316 91.8
CARHR274990 Cardamine hirsuta HOM05D003751 ORTHO05D004765 3.8e-52 209.5 317 91.5
THA.LOC104801343 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 3.8e-52 209.5 318 90.3
Aa31LG11G2120 Aethionema arabicum HOM05D003751 ORTHO05D004765 1.1e-51 208.0 320 91.6
A03p46870 Brassica napus HOM05D003751 ORTHO05D004765 1.1e-51 208.0 316 91.5
vmacro01326 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 1.5e-51 207.6 355 65.4
BcaC06g33170 Brassica carinata HOM05D003751 ORTHO05D004765 3.3e-51 206.5 316 91.1
A09p07270 Brassica napus HOM05D003751 ORTHO05D004765 3.3e-51 206.5 318 90.9
BcaC04g23458 Brassica carinata HOM05D003751 ORTHO05D004765 4.3e-51 206.1 318 90.9
Sed0012304 Sechium edule HOM05D003751 ORTHO05D004765 4.3e-51 206.1 319 87.1
AUR62007943 Chenopodium quinoa HOM05D003751 ORTHO05D004765 5.6e-51 205.7 318 77.4
Thecc.02G335000 Theobroma cacao HOM05D003751 ORTHO05D004765 7.3e-51 205.3 304 92.1
C09p08130 Brassica napus HOM05D003751 ORTHO05D004765 1.6e-50 204.1 318 90.6
SalBow2G2522 Salvia bowleyana HOM05D003751 ORTHO05D004765 1.6e-50 204.1 344 86.3
Sed0016795 Sechium edule HOM05D003751 ORTHO05D004765 1.6e-50 204.1 320 89.1
Haze_11929 Corylus avellana HOM05D003751 ORTHO05D004765 2.1e-50 203.8 362 67.7
CDE07G1785 Ceratophyllum demersum HOM05D003751 ORTHO05D004765 3.6e-50 203.0 322 89.1
CsaV3_5G033180 Cucumis sativus L. HOM05D003751 ORTHO05D004765 4.7e-50 202.6 320 89.1
Duzib251G0914 Durio zibethinus HOM05D003751 ORTHO05D004765 8.0e-50 201.8 319 89.0
COL.COLO4_27919 Corchorus olitorius HOM05D003751 ORTHO05D004765 1.4e-49 201.1 310 90.3
AUR62003123 Chenopodium quinoa HOM05D003751 ORTHO05D004765 2.3e-49 200.3 242 90.1
Peaxi162Scf00314g00122 Petunia axillaris HOM05D003751 ORTHO05D004765 3.0e-49 199.9 295 92.9
SalBow2G2568 Salvia bowleyana HOM05D003751 ORTHO05D004765 3.0e-49 199.9 344 78.5
Actinidia19010 Actinidia chinensis HOM05D003751 ORTHO05D004765 5.2e-49 199.1 331 86.4
BolC7t45015H Brassica oleracea HOM05D003751 ORTHO05D004765 5.2e-49 199.1 332 74.7
TWI75G1095 Tripterygium wilfordii HOM05D003751 ORTHO05D004765 5.2e-49 199.1 246 91.1
BraA03t13807Z Brassica rapa HOM05D003751 ORTHO05D004765 1.2e-48 198.0 325 76.9
Sabra10G0122300 Salix brachista HOM05D003751 ORTHO05D004765 9.8e-48 194.9 249 88.0
BraA09t36376Z Brassica rapa HOM05D003751 ORTHO05D004765 1.3e-47 194.5 337 73.3
Hma1.2p1_0322F.1_g124910 Hydrangea macrophylla HOM05D003751 ORTHO05D004765 3.7e-47 193.0 327 87.2
Aqoxy3G03571 Aquilegia oxysepala HOM05D003751 ORTHO05D004765 6.4e-47 192.2 325 88.0
SEGI_02286 Sequoiadendron giganteum HOM05D003751 ORTHO05D004765 8.3e-47 191.8 321 86.3
FvH4_4g30420 Fragaria vesca HOM05D003751 ORTHO05D004765 1.4e-46 191.0 328 88.4
MSTRG.738 Avicennia marina HOM05D003751 ORTHO05D004765 3.2e-46 189.9 328 85.7
PSO384G1483 Papaver somniferum HOM05D003751 ORTHO05D004765 1.2e-45 188.0 318 88.4
SHI26375 Sapria himalayana HOM05D003751 ORTHO05D004765 2.7e-45 186.8 253 70.4
Gohir.D02G128600 Gossypium hirsutum HOM05D003751 ORTHO05D004765 7.8e-45 185.3 320 84.7
Gorai.005G144300 Gossypium raimondii HOM05D003751 ORTHO05D004765 7.8e-45 185.3 320 84.7
CSS0000444 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 1.0e-44 184.9 334 69.2
Gohir.D12G183125 Gossypium hirsutum HOM05D003751 ORTHO05D004765 3.0e-44 183.3 327 79.2
Gohir.D12G183200 Gossypium hirsutum HOM05D003751 ORTHO05D004765 3.0e-44 183.3 327 79.2
THA.LOC104824065 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 3.0e-44 183.3 317 84.9
DCAR_007183 Daucus carota HOM05D003751 ORTHO05D004765 1.9e-43 180.6 345 80.6
ATR0064G031 Amborella trichopoda HOM05D003751 ORTHO05D004765 5.6e-43 179.1 325 84.3
FAN12G0947 Fragaria x ananassa HOM05D003751 ORTHO05D004765 5.6e-43 179.1 346 75.4
BolC9t53725H Brassica oleracea HOM05D003751 ORTHO05D006139 7.3e-43 178.7 251 86.1
FAN07G2601 Fragaria x ananassa HOM05D003751 ORTHO05D004765 9.5e-43 178.3 104 85.6
MELO3C002928.2 Cucumis melo HOM05D003751 ORTHO05D004765 1.2e-42 177.9 320 86.6
MBI16_g16360_MAGBIO Magnolia biondii HOM05D003751 ORTHO05D004765 6.2e-42 175.6 325 85.5
SalBow2G0317 Salvia bowleyana HOM05D003751 ORTHO05D004765 6.2e-42 175.6 286 78.0
HPP92_007743 Vanilla planifolia HOM05D003751 ORTHO05D004765 1.4e-41 174.5 325 84.9
Sp1g12050 Schrenkiella parvula HOM05D003751 ORTHO05D004765 3.1e-41 173.3 328 82.3
CsaV3_5G025510 Cucumis sativus L. HOM05D003751 ORTHO05D004765 5.2e-41 172.6 320 85.6
ClCG09G022210 Citrullus lanatus HOM05D003751 ORTHO05D004765 8.9e-41 171.8 324 71.0
QL03p070738 Quercus lobata HOM05D003751 ORTHO05D004765 1.2e-40 171.4 96 86.5
Thhalv10008166m.g Eutrema salsugineum HOM05D003751 ORTHO05D004765 2.0e-40 170.6 328 84.1
vmacro16373 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 5.8e-40 169.1 102 81.4
vmacro23251 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 5.8e-40 169.1 102 81.4
AL1G25740 Arabidopsis lyrata HOM05D003751 ORTHO05D004765 9.8e-40 168.3 328 82.0
AT1G13910 Arabidopsis thaliana HOM05D003751 ORTHO05D004765 2.2e-39 167.2 317 83.6
Dinv38780 Davidia involucrata HOM05D003751 ORTHO05D004765 2.2e-39 167.2 96 84.4
DCAR_005254 Daucus carota HOM05D003751 ORTHO05D004765 6.4e-39 165.6 100 81.0
DCAR_016919 Daucus carota HOM05D003751 ORTHO05D004765 6.4e-39 165.6 100 81.0
ClCG05G023830 Citrullus lanatus HOM05D003751 ORTHO05D004765 1.1e-38 164.9 95 84.2
MELO3C012139.2 Cucumis melo HOM05D003751 ORTHO05D004765 1.9e-38 164.1 95 84.2
Os03g0211900 Oryza sativa ssp. japonica HOM05D003751 ORTHO05D004765 7.8e-37 158.7 94 84.0
Cpa.g.sc94.5 Carica papaya HOM05D003751 ORTHO05D004765 1.7e-36 157.5 96 81.2
CDE04G0854 Ceratophyllum demersum HOM05D003751 ORTHO05D004765 1.7e-36 157.5 96 79.2
Zm00001eb008460 Zea mays HOM05D003751 ORTHO05D004765 3.0e-36 156.8 94 81.9
Carub.0001s1361 Capsella rubella HOM05D003751 ORTHO05D004765 6.6e-36 155.6 251 81.3
Aa31LG1G1100 Aethionema arabicum HOM05D002953 ORTHO05D003249 6.8e-33 145.6 243 79.8
Hund25193 Selenicereus undatus HOM05D003751 ORTHO05D004765 2.7e-29 133.7 73 84.9
SMO307G0068 Selaginella moellendorffii HOM05D003751 ORTHO05D004765 3.0e-28 130.2 306 78.1
CARHR014280 Cardamine hirsuta HOM05D003751 ORTHO05D004765 5.1e-28 129.4 103 63.1
Oeu031422.1 Olea europaea HOM05D003751 ORTHO05D004765 5.1e-28 129.4 83 80.7
Actinidia28633 Actinidia chinensis HOM05D003751 ORTHO05D004765 5.6e-27 125.9 278 80.9
AagrBONN_evm.TU.Sc2ySwM_228.5257 Anthoceros agrestis HOM05D003751 ORTHO05D004765 2.1e-26 124.0 329 74.8
Dinv16710 Davidia involucrata HOM05D003751 ORTHO05D004765 2.5e-19 100.5 252 72.2
CSS0008157 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 4.3e-19 99.8 120 90.8
Nitab4.5_0004304g0080 Nicotiana tabacum HOM05D003751 ORTHO05D004765 4.3e-19 99.8 86 62.8
Nitab4.5_0017073g0010 Nicotiana tabacum HOM05D003751 ORTHO05D004765 4.3e-19 99.8 65 75.4
SMO239G0097 Selaginella moellendorffii HOM05D003751 ORTHO05D011646 1.8e-17 94.4 64 64.1
Sopen05g021560 Solanum pennellii HOM05D003751 ORTHO05D004765 5.2e-17 92.8 50 82.0
Lj3A1031T31 Lonicera japonica HOM05D003751 ORTHO05D004765 2.0e-16 90.9 120 54.2
SMO239G0021 Selaginella moellendorffii HOM05D003751 ORTHO05D011646 3.4e-16 90.1 64 62.5
Gohir.A03G103400 Gossypium hirsutum HOM05D003751 ORTHO05D004765 7.6e-16 89.0 256 86.7
SEGI_40768 Sequoiadendron giganteum HOM05D003751 ORTHO05D004765 1.3e-12 78.2 75 53.3
CAN.G607.6 Capsicum annuum HOM05D003751 ORTHO05D024790 2.3e-12 77.4 42 88.1
RcHm_v2.0_Chr3g0459551 Rosa chinensis HOM05D003751 ORTHO05D004765 2.3e-12 77.4 48 81.2
Sopen05g021540 Solanum pennellii HOM05D003751 ORTHO05D004765 3.0e-12 77.0 50 74.0
Gohir.D13G128551 Gossypium hirsutum HOM05D003751 ORTHO05D024790 4.3e-11 73.2 42 85.7
Gorai.013G144600 Gossypium raimondii HOM05D003751 ORTHO05D024790 3.6e-10 70.1 42 83.3
BolC2t12198H Brassica oleracea HOM05D003751 ORTHO05D017703 1.4e-09 68.2 94 47.9
C02p61470 Brassica napus HOM05D003751 ORTHO05D017703 1.2e-08 65.1 94 45.7
Sopen01g022300 Solanum pennellii HOM05D003751 ORTHO05D004765 4.5e-08 63.2 40 75.0
BraA02t09094Z Brassica rapa HOM05D003751 ORTHO05D004765 5.8e-08 62.8 47 68.1


User provided reference genes

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