Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0209311 Helianthus annuus HOM05D007299 ORTHO05D009106 7.2e-140 500.7 285 100.0
ECA246G3185 Erigeron canadensis HOM05D007299 ORTHO05D009106 1.9e-92 343.2 285 63.5
Lsat_1_v5_gn_3_34281 Lactuca sativa HOM05D007299 ORTHO05D009106 1.3e-88 330.5 295 64.4
Dinv13815 Davidia involucrata HOM05D007299 ORTHO05D009106 2.4e-66 256.5 284 52.1
vmacro10889 Vaccinium macrocarpon HOM05D007299 ORTHO05D009106 9.9e-65 251.1 311 53.1
TAR622G0038 Trochodendron aralioides HOM05D007299 ORTHO05D009106 3.9e-61 239.2 301 48.5
CANSAT78G0052 Cannabis sativa HOM05D007299 ORTHO05D009106 5.6e-60 235.3 283 46.3
Rhsim09G0078300 Rhododendron simsii HOM05D007299 ORTHO05D009106 1.3e-59 234.2 303 50.5
Cfa015123 Carpinus fangiana HOM05D007299 ORTHO05D009106 2.1e-59 233.4 287 46.0
Ciclev10005530m.g Citrus clementina HOM05D007299 ORTHO05D009106 3.7e-59 232.6 292 47.9
Lj3A853G78 Lonicera japonica HOM05D007299 ORTHO05D009106 8.1e-59 231.5 251 57.0
Actinidia13749 Actinidia chinensis HOM05D007299 ORTHO05D009106 1.4e-58 230.7 331 48.0
GSVIVG01010231001 Vitis vinifera HOM05D007299 ORTHO05D009106 5.3e-58 228.8 299 48.2
CiPaw.05G165900 Carya illinoinensis HOM05D007299 ORTHO05D009106 9.0e-58 228.0 288 47.2
Manes.10G068700 Manihot esculenta HOM05D007299 ORTHO05D009106 1.2e-57 227.6 284 46.8
PGR044G1966 Punica granatum HOM05D007299 ORTHO05D009106 2.0e-57 226.9 322 43.8
Nn3g18668 Nelumbo nucifera HOM05D007299 ORTHO05D009106 4.5e-57 225.7 295 49.2
DCAR_023506 Daucus carota HOM05D007299 ORTHO05D009106 5.8e-57 225.3 332 44.6
MELO3C004425.2 Cucumis melo HOM05D007299 ORTHO05D009106 9.9e-57 224.6 290 46.6
PSO384G1235 Papaver somniferum HOM05D007299 ORTHO05D009106 9.9e-57 224.6 312 46.8
TWI77G0874 Tripterygium wilfordii HOM05D007299 ORTHO05D009106 1.3e-56 224.2 312 44.9
Sabra10G0069800 Salix brachista HOM05D007299 ORTHO05D009106 6.4e-56 221.9 317 52.4
Potri.010G097400 Populus trichocarpa HOM05D007299 ORTHO05D009106 1.9e-55 220.3 286 54.9
Migut.L00603 Erythranthe guttata HOM05D007299 ORTHO05D009106 4.2e-55 219.2 284 46.8
Sed0015300 Sechium edule HOM05D007299 ORTHO05D009106 7.1e-55 218.4 282 46.5
PSO339G0795 Papaver somniferum HOM05D007299 ORTHO05D009106 1.2e-54 217.6 318 49.4
PGSC0003DMG400031371 Solanum tuberosum HOM05D007299 ORTHO05D009106 2.7e-54 216.5 286 45.8
Cc11_g02600 Coffea canephora HOM05D007299 ORTHO05D009106 4.6e-54 215.7 306 42.8
COL.COLO4_27652 Corchorus olitorius HOM05D002463 ORTHO05D002669 3.9e-53 212.6 293 42.0
RcHm_v2.0_Chr4g0446201 Rosa chinensis HOM05D007299 ORTHO05D009106 3.9e-53 212.6 291 45.7
Eucgr.J01834 Eucalyptus grandis HOM05D007299 ORTHO05D009106 8.7e-53 211.5 289 43.3
FvH4_4g36440 Fragaria vesca HOM05D007299 ORTHO05D009106 3.3e-52 209.5 295 46.4
AL3G12230 Arabidopsis lyrata HOM05D007299 ORTHO05D009106 5.6e-52 208.8 277 44.0
FAN22G0217 Fragaria x ananassa HOM05D007299 ORTHO05D009106 5.6e-52 208.8 296 45.6
Cpa.g.sc2.109 Carica papaya HOM05D007299 ORTHO05D009106 7.4e-52 208.4 285 43.9
AT3G02820 Arabidopsis thaliana HOM05D007299 ORTHO05D009106 9.6e-52 208.0 262 44.7
arahy.Tifrunner.gnm1.ann1.NVJW8G Arachis hypogaea HOM05D007299 ORTHO05D009106 9.6e-52 208.0 291 45.4
FAN12G2175 Fragaria x ananassa HOM05D007299 ORTHO05D009106 9.6e-52 208.0 293 45.4
FAN17G2059 Fragaria x ananassa HOM05D007299 ORTHO05D009106 1.3e-51 207.6 295 46.1
Aqoxy3G04214 Aquilegia oxysepala HOM05D007299 ORTHO05D009106 2.1e-51 206.8 291 48.5
CsaV3_2G003690 Cucumis sativus L. HOM05D007299 ORTHO05D009106 2.1e-51 206.8 285 51.2
Aa31LG5G13290 Aethionema arabicum HOM05D007299 ORTHO05D009106 2.8e-51 206.5 287 43.9
Nitab4.5_0000129g0380 Nicotiana tabacum HOM05D007299 ORTHO05D009106 2.8e-51 206.5 284 46.1
Hund24259 Selenicereus undatus HOM05D007299 ORTHO05D009106 2.8e-51 206.5 317 41.3
CAN.G880.11 Capsicum annuum HOM05D007299 ORTHO05D009106 4.8e-51 205.7 281 48.8
MD16G1007200 Malus domestica HOM05D007299 ORTHO05D009106 8.2e-51 204.9 286 45.8
FAN07G2538 Fragaria x ananassa HOM05D007299 ORTHO05D009106 1.1e-50 204.5 295 45.8
arahy.Tifrunner.gnm1.ann1.IBNY1Y Arachis hypogaea HOM05D007299 ORTHO05D009106 1.8e-50 203.8 291 45.0
Gohir.D02G135500 Gossypium hirsutum HOM05D007299 ORTHO05D009106 2.4e-50 203.4 299 41.1
MD13G1009200 Malus domestica HOM05D007299 ORTHO05D009106 2.4e-50 203.4 291 45.4
Solyc04g008600.4 Solanum lycopersicum HOM05D007299 ORTHO05D009106 2.4e-50 203.4 296 47.6
BraA06t23286Z Brassica rapa HOM05D007299 ORTHO05D009106 3.1e-50 203.0 279 43.7
Sopen04g003760 Solanum pennellii HOM05D007299 ORTHO05D009106 3.1e-50 203.0 287 48.4
Lj3g0027807 Lotus japonicus HOM05D007299 ORTHO05D009106 4.0e-50 202.6 295 44.4
Carub.0003s0192 Capsella rubella HOM05D007299 ORTHO05D009106 5.3e-50 202.2 281 42.3
Thhalv10021242m.g Eutrema salsugineum HOM05D007299 ORTHO05D009106 5.3e-50 202.2 268 44.4
MBI03_g22264_MAGBIO Magnolia biondii HOM05D007299 ORTHO05D009106 5.3e-50 202.2 314 41.4
Duzib268G1125 Durio zibethinus HOM05D007299 ORTHO05D009106 6.9e-50 201.8 309 40.1
Sp3g01850 Schrenkiella parvula HOM05D007299 ORTHO05D009106 6.9e-50 201.8 274 40.9
Prupe.1G343500 Prunus persica HOM05D007299 ORTHO05D009106 9.0e-50 201.4 303 45.5
A05p44300 Brassica napus HOM05D007299 ORTHO05D009106 1.5e-49 200.7 276 42.4
AUR62015163 Chenopodium quinoa HOM05D007299 ORTHO05D009106 2.0e-49 200.3 313 42.5
HPP92_025841 Vanilla planifolia HOM05D007299 ORTHO05D009106 2.0e-49 200.3 210 49.0
VMungo1127G0955 Vigna mungo HOM05D007299 ORTHO05D009106 2.6e-49 199.9 300 43.3
Gorai.005G151500 Gossypium raimondii HOM05D007299 ORTHO05D009106 3.4e-49 199.5 299 41.1
Ca_19013_v3 Cicer arietinum L. HOM05D007299 ORTHO05D009106 1.7e-48 197.2 286 43.7
Phvul.011G028100 Phaseolus vulgaris HOM05D007299 ORTHO05D009106 1.7e-48 197.2 295 43.1
QL03p042773 Quercus lobata HOM05D007299 ORTHO05D009106 2.2e-48 196.8 180 55.0
CARHR076830 Cardamine hirsuta HOM05D007299 ORTHO05D009106 3.8e-48 196.1 269 42.8
TPR.G24986 Trifolium pratense HOM05D007299 ORTHO05D009106 3.8e-48 196.1 286 42.3
Atru.chr11.1092 Acer truncatum HOM05D007299 ORTHO05D009106 8.4e-48 194.9 223 48.0
unitig_899.g15439 Utricularia gibba HOM05D005548 ORTHO05D007497 1.4e-47 194.1 290 42.4
Glyma.11G099800 Glycine max HOM05D007299 ORTHO05D009106 1.9e-47 193.7 290 44.1
Thecc.02G310600 Theobroma cacao HOM05D007299 ORTHO05D009106 4.2e-47 192.6 317 36.6
C09p75940 Brassica napus HOM05D007299 ORTHO05D009106 1.6e-46 190.7 276 42.0
BolC5t35063H Brassica oleracea HOM05D007299 ORTHO05D009106 1.6e-46 190.7 276 42.0
Lalb_Chr19g0139441 Lupinus albus HOM05D007299 ORTHO05D009106 3.5e-46 189.5 285 42.1
Sc21g0004170 Simmondsia chinensis HOM05D007299 ORTHO05D009106 1.0e-45 188.0 288 44.1
Psat7g177800 Pisum sativum HOM05D007299 ORTHO05D009106 2.3e-45 186.8 273 43.2
MSTRG.422 Avicennia marina HOM05D007299 ORTHO05D009106 3.0e-45 186.4 173 53.8
EL10Ac9g22867 Beta vulgaris HOM05D007299 ORTHO05D009106 2.5e-44 183.3 285 41.8
ATR0618G188 Amborella trichopoda HOM05D007299 ORTHO05D009106 3.3e-44 183.0 224 44.6
Glyma.12G025700 Glycine max HOM05D007299 ORTHO05D009106 3.3e-44 183.0 297 42.1
SGA_v2.0_scaffold47G17515 Striga asiatica HOM05D007299 ORTHO05D009106 3.7e-43 179.5 273 43.2
THA.LOC104820913 Tarenaya hassleriana HOM05D007299 ORTHO05D009106 6.3e-43 178.7 216 47.7
Os02g0762200 Oryza sativa ssp. japonica HOM05D007299 ORTHO05D009106 8.2e-43 178.3 324 46.0
Peaxi162Scf00329g00814 Petunia axillaris HOM05D007299 ORTHO05D009106 5.3e-42 175.6 285 42.8
SEGI_39636 Sequoiadendron giganteum HOM05D007299 ORTHO05D009106 3.8e-40 169.5 294 38.1
Nitab4.5_0003882g0040 Nicotiana tabacum HOM05D007299 ORTHO05D009106 6.1e-38 162.2 284 41.5
AagrBONN_evm.TU.Sc2ySwM_344.3308 Anthoceros agrestis HOM05D007299 ORTHO05D009106 2.2e-32 143.7 192 40.6
Pp3c24_950 Physcomitrium patens HOM05D007299 ORTHO05D009106 1.1e-31 141.4 292 36.6
Zm00001eb228900 Zea mays HOM05D007299 ORTHO05D009106 6.7e-29 132.1 158 46.2
Gohir.A03G110900 Gossypium hirsutum HOM05D007299 ORTHO05D009106 5.7e-28 129.0 166 43.4
Mapoly0024s0064 Marchantia polymorpha HOM05D007299 ORTHO05D009106 7.0e-26 122.1 312 30.8
CDE04G3037 Ceratophyllum demersum HOM05D007299 ORTHO05D009106 4.5e-25 119.4 217 46.1
Ah.01g013250 Amaranthus hybridus HOM05D007299 ORTHO05D009106 2.3e-21 107.1 168 39.9
SMO339G0024 Selaginella moellendorffii HOM05D007299 ORTHO05D009106 1.3e-19 101.3 270 37.8
AUR62017615 Chenopodium quinoa HOM05D007299 ORTHO05D009106 3.7e-19 99.8 284 30.6
Oeu061722.1 Olea europaea HOM05D007299 ORTHO05D009106 3.1e-18 96.7 118 44.9
ClCG02G017080 Citrullus lanatus HOM05D007299 ORTHO05D009106 4.4e-12 76.3 134 38.1
Glyma.14G178300 Glycine max HOM05D007299 ORTHO05D009106 1.6e-09 67.8 163 37.4
MCO03G157 Micromonas commoda HOM05D007299 ORTHO05D009106 3.5e-09 66.6 186 31.2


User provided reference genes

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