Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0209191 Helianthus annuus HOM05D007070 ORTHO05D008892 7.8e-98 360.5 191 100.0
Lsat_1_v5_gn_8_52140 Lactuca sativa HOM05D007070 ORTHO05D008892 5.4e-75 284.6 204 80.9
Hma1.2p1_0598F.1_g186810 Hydrangea macrophylla HOM05D007070 ORTHO05D008892 5.1e-65 251.5 195 71.3
DCAR_007140 Daucus carota HOM05D007070 ORTHO05D008892 1.3e-63 246.9 191 69.6
MD13G1074900 Malus domestica HOM05D007070 ORTHO05D008892 2.1e-63 246.1 172 74.4
Manes.05G098800 Manihot esculenta HOM05D007070 ORTHO05D008892 4.8e-63 245.0 153 80.4
Thecc.02G352500 Theobroma cacao HOM05D007070 ORTHO05D008892 1.8e-62 243.0 187 72.7
Dinv34174 Davidia involucrata HOM05D007070 ORTHO05D008892 3.1e-62 242.3 165 75.2
TAR622G0001 Trochodendron aralioides HOM05D007070 ORTHO05D008892 3.1e-62 242.3 170 77.1
RcHm_v2.0_Chr4g0440151 Rosa chinensis HOM05D007070 ORTHO05D008892 4.0e-62 241.9 166 74.7
COL.COLO4_22972 Corchorus olitorius HOM05D007070 ORTHO05D008892 6.9e-62 241.1 187 72.2
Lj3P1040T26 Lonicera japonica HOM05D007070 ORTHO05D008892 9.0e-62 240.7 172 76.2
TWI75G1629 Tripterygium wilfordii HOM05D007070 ORTHO05D008892 9.0e-62 240.7 153 77.8
CiPaw.05G138000 Carya illinoinensis HOM05D007070 ORTHO05D008892 1.5e-61 240.0 185 68.6
Gohir.A13G072600 Gossypium hirsutum HOM05D007070 ORTHO05D008892 1.5e-61 240.0 157 79.0
FvH4_4g31650 Fragaria vesca HOM05D007070 ORTHO05D008892 4.5e-61 238.4 156 76.9
FAN07G2888 Fragaria x ananassa HOM05D007070 ORTHO05D008892 4.5e-61 238.4 156 76.9
Potri.010G093300 Populus trichocarpa HOM05D007070 ORTHO05D008892 4.5e-61 238.4 154 78.6
FAN17G0782 Fragaria x ananassa HOM05D007070 ORTHO05D008892 5.8e-61 238.0 156 76.9
FAN22G1781 Fragaria x ananassa HOM05D007070 ORTHO05D008892 5.8e-61 238.0 156 76.9
Actinidia31196 Actinidia chinensis HOM05D007070 ORTHO05D008892 9.9e-61 237.3 187 70.6
Gorai.013G083500 Gossypium raimondii HOM05D007070 ORTHO05D008892 1.3e-60 236.9 182 69.8
FAN12G3127 Fragaria x ananassa HOM05D007070 ORTHO05D008892 1.7e-60 236.5 156 76.3
Lalb_Chr10g0098121 Lupinus albus HOM05D007070 ORTHO05D008892 2.2e-60 236.1 204 65.2
ATR0564G356 Amborella trichopoda HOM05D007070 ORTHO05D008892 2.9e-60 235.7 154 74.7
Cpa.g.sc183.28 Carica papaya HOM05D007070 ORTHO05D008892 2.9e-60 235.7 150 79.3
Duzib251G0126 Durio zibethinus HOM05D007070 ORTHO05D008892 2.9e-60 235.7 203 68.0
Nitab4.5_0000141g0310 Nicotiana tabacum HOM05D007070 ORTHO05D008892 2.9e-60 235.7 197 68.5
Nitab4.5_0012600g0010 Nicotiana tabacum HOM05D007070 ORTHO05D008892 2.9e-60 235.7 197 69.0
Duzib268G0688 Durio zibethinus HOM05D007070 ORTHO05D008892 3.8e-60 235.3 157 78.3
Peaxi162Scf00026g00288 Petunia axillaris HOM05D007070 ORTHO05D008892 3.8e-60 235.3 198 70.2
PGR119G1526 Punica granatum HOM05D007070 ORTHO05D008892 4.9e-60 235.0 159 76.7
Gohir.D13G072700 Gossypium hirsutum HOM05D007070 ORTHO05D008892 6.4e-60 234.6 157 77.7
MBI05_g00391_MAGBIO Magnolia biondii HOM05D007070 ORTHO05D008892 8.4e-60 234.2 178 71.9
CDE05G3062 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 1.1e-59 233.8 179 69.8
Sabra10G0065800 Salix brachista HOM05D007070 ORTHO05D008892 1.4e-59 233.4 154 76.6
Aqoxy3G03327 Aquilegia oxysepala HOM05D007070 ORTHO05D008892 1.9e-59 233.0 162 75.9
ECA236G0127 Erigeron canadensis HOM05D007070 ORTHO05D008892 1.9e-59 233.0 192 68.8
TAR374G1105 Trochodendron aralioides HOM05D007070 ORTHO05D008892 2.4e-59 232.6 153 77.8
CSS0037166 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 4.2e-59 231.9 194 66.5
CSS0050316 Camellia sinensis var. sinensis HOM05D007070 ORTHO05D008892 4.2e-59 231.9 194 66.5
Phvul.002G088700 Phaseolus vulgaris HOM05D007070 ORTHO05D008892 4.2e-59 231.9 155 76.8
SalBow2G0737 Salvia bowleyana HOM05D007070 ORTHO05D008892 4.2e-59 231.9 153 77.1
SalBow2G1571 Salvia bowleyana HOM05D007070 ORTHO05D008892 4.2e-59 231.9 153 77.1
Haze_12036 Corylus avellana HOM05D007070 ORTHO05D008892 1.2e-58 230.3 196 63.8
Psat2g122360 Pisum sativum HOM05D007070 ORTHO05D008892 1.2e-58 230.3 173 69.4
VMungo1215G0639 Vigna mungo HOM05D007070 ORTHO05D008892 1.2e-58 230.3 155 76.8
QL03p064901 Quercus lobata HOM05D007070 ORTHO05D008892 1.6e-58 229.9 160 74.4
Solyc01g010640.3 Solanum lycopersicum HOM05D007070 ORTHO05D008892 2.1e-58 229.6 160 75.0
Sopen01g006270 Solanum pennellii HOM05D007070 ORTHO05D008892 2.1e-58 229.6 160 75.0
Medtr5g038970 Medicago truncatula HOM05D007070 ORTHO05D008892 3.5e-58 228.8 181 68.5
Atru.chr11.1834 Acer truncatum HOM05D007070 ORTHO05D008892 4.6e-58 228.4 199 66.3
Prupe.1G271300 Prunus persica HOM05D007070 ORTHO05D008892 4.6e-58 228.4 172 70.3
CAN.G375.28 Capsicum annuum HOM05D007070 ORTHO05D008892 1.3e-57 226.9 213 63.4
Migut.L01320 Erythranthe guttata HOM05D007070 ORTHO05D008892 1.3e-57 226.9 175 70.3
PGSC0003DMG400000874 Solanum tuberosum HOM05D007070 ORTHO05D008892 1.3e-57 226.9 202 66.3
Rhsim12G0131600 Rhododendron simsii HOM05D007070 ORTHO05D008892 3.9e-57 225.3 138 81.9
RhsimUnG0241900 Rhododendron simsii HOM05D007070 ORTHO05D008892 3.9e-57 225.3 138 81.9
SGA_v2.0_scaffold302G47841 Striga asiatica HOM05D007070 ORTHO05D008892 5.1e-57 224.9 160 73.1
arahy.Tifrunner.gnm1.ann1.H49BTR Arachis hypogaea HOM05D007070 ORTHO05D008892 6.7e-57 224.6 159 73.6
arahy.Tifrunner.gnm1.ann1.P1GF9J Arachis hypogaea HOM05D007070 ORTHO05D008892 8.7e-57 224.2 198 64.6
CANSAT56G2723 Cannabis sativa HOM05D007070 ORTHO05D008892 1.5e-56 223.4 151 74.2
Ciclev10032797m.g Citrus clementina HOM05D007070 ORTHO05D008892 1.5e-56 223.4 197 64.0
Glyma.02G019200 Glycine max HOM05D007070 ORTHO05D008892 1.5e-56 223.4 166 73.5
Cc11_g13320 Coffea canephora HOM05D007070 ORTHO05D008892 2.5e-56 222.6 200 64.5
Glyma.01G044500 Glycine max HOM05D007070 ORTHO05D008892 3.3e-56 222.2 192 65.1
Sed0007814 Sechium edule HOM05D007070 ORTHO05D008892 3.3e-56 222.2 195 62.6
Ah.02g131260 Amaranthus hybridus HOM05D007070 ORTHO05D008892 4.3e-56 221.9 181 66.9
Ca_04760_v3 Cicer arietinum L. HOM05D007070 ORTHO05D008892 4.3e-56 221.9 182 66.5
MSTRG.13406 Avicennia marina HOM05D007070 ORTHO05D008892 8.1e-55 217.6 151 75.5
AUR62005745 Chenopodium quinoa HOM05D007070 ORTHO05D008892 8.1e-55 217.6 186 66.1
Lj2g0006172 Lotus japonicus HOM05D007070 ORTHO05D008892 1.4e-54 216.9 129 82.2
Sc04g0008310 Simmondsia chinensis HOM05D007070 ORTHO05D008892 1.4e-54 216.9 149 75.2
CsaV3_5G032500 Cucumis sativus L. HOM05D007070 ORTHO05D008892 3.1e-54 215.7 180 65.0
MELO3C012078.2 Cucumis melo HOM05D007070 ORTHO05D008892 4.0e-54 215.3 180 65.6
AL1G26230 Arabidopsis lyrata HOM05D007070 ORTHO05D008892 2.0e-53 213.0 188 63.3
PSO832G2327 Papaver somniferum HOM05D007070 ORTHO05D008892 2.6e-53 212.6 171 69.6
Thhalv10008846m.g Eutrema salsugineum HOM05D007070 ORTHO05D008892 7.6e-53 211.1 195 62.1
PSO591G0158 Papaver somniferum HOM05D007070 ORTHO05D008892 7.6e-53 211.1 171 70.2
Carub.0001s1403 Capsella rubella HOM05D007070 ORTHO05D008892 1.3e-52 210.3 179 64.8
AT1G14345 Arabidopsis thaliana HOM05D007070 ORTHO05D008892 1.7e-52 209.9 191 62.3
C05p12140 Brassica napus HOM05D007070 ORTHO05D008892 2.2e-52 209.5 138 75.4
BolC5t29966H Brassica oleracea HOM05D007070 ORTHO05D008892 2.2e-52 209.5 138 75.4
Eucgr.G02521 Eucalyptus grandis HOM05D007070 ORTHO05D008892 2.2e-52 209.5 157 69.4
Sp1g12710 Schrenkiella parvula HOM05D007070 ORTHO05D008892 2.2e-52 209.5 175 65.1
A06p10330 Brassica napus HOM05D007070 ORTHO05D008892 2.9e-52 209.1 138 75.4
BraA06t24215Z Brassica rapa HOM05D007070 ORTHO05D008892 2.9e-52 209.1 138 75.4
CDE05G3277 Ceratophyllum demersum HOM05D007070 ORTHO05D008892 2.9e-52 209.1 133 76.7
CARHR014780 Cardamine hirsuta HOM05D007070 ORTHO05D008892 3.8e-52 208.8 201 59.7
Aa31LG1G700 Aethionema arabicum HOM05D007070 ORTHO05D008892 6.5e-52 208.0 200 58.5
TPR.G36542 Trifolium pratense HOM05D007070 ORTHO05D008892 6.5e-52 208.0 120 80.8
BcaB02g06484 Brassica carinata HOM05D007070 ORTHO05D008892 1.4e-51 206.8 180 63.9
ClCG05G024460 Citrullus lanatus HOM05D007070 ORTHO05D008892 3.2e-51 205.7 126 81.0
HPP92_018585 Vanilla planifolia HOM05D007070 ORTHO05D008892 5.7e-48 194.9 150 65.3
AagrBONN_evm.TU.Sc2ySwM_362.2904 Anthoceros agrestis HOM05D007070 ORTHO05D008892 1.3e-47 193.7 132 68.9
MSTRG.684 Avicennia marina HOM05D007070 ORTHO05D008892 1.6e-47 193.4 165 66.7
THA.LOC104805942 Tarenaya hassleriana HOM05D007070 ORTHO05D008892 2.8e-47 192.6 145 70.3
Zm00001eb402240 Zea mays HOM05D007070 ORTHO05D008892 4.8e-47 191.8 119 73.9
HPP92_018595 Vanilla planifolia HOM05D007070 ORTHO05D008892 1.1e-46 190.7 161 64.0
Os03g0170500 Oryza sativa ssp. japonica HOM05D007070 ORTHO05D008892 1.4e-46 190.3 119 74.8
SEGI_28311 Sequoiadendron giganteum HOM05D007070 ORTHO05D008892 9.0e-46 187.6 124 72.6
unitig_699.g19919 Utricularia gibba HOM05D007070 ORTHO05D008892 1.3e-44 183.7 132 68.9
SMO329G0045 Selaginella moellendorffii HOM05D007070 ORTHO05D008892 1.9e-43 179.9 119 71.4
Mapoly0002s0258 Marchantia polymorpha HOM05D007070 ORTHO05D008892 2.5e-43 179.5 152 61.8
BcaC05g25332 Brassica carinata HOM05D007070 ORTHO05D008892 1.0e-41 174.1 138 67.4
CBR_g47945 Chara braunii HOM05D007070 ORTHO05D008892 4.8e-39 165.2 127 57.5
Sc04g0008340 Simmondsia chinensis HOM05D007070 ORTHO05D008892 2.6e-32 142.9 149 54.4
AUR62028813 Chenopodium quinoa HOM05D007070 ORTHO05D008892 2.8e-31 139.4 133 57.9
Cre08.g358540 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 4.1e-22 109.0 111 43.2
MCO16G462 Micromonas commoda HOM05D007070 ORTHO05D008892 3.5e-21 105.9 121 43.8
PRCOL_00004582 Prasinoderma coloniale HOM05D007070 ORTHO05D008892 1.8e-14 83.6 118 39.8
Atru.chr2.2148 Acer truncatum HOM05D007070 ORTHO05D008892 4.1e-14 82.4 54 72.2
Cre07.g321300 Chlamydomonas reinhardtii HOM05D007070 ORTHO05D008892 4.1e-14 82.4 114 33.3


User provided reference genes

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