Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0208641 Helianthus annuus HOM05D003833 ORTHO05D004209 1.8e-50 202.2 96 100.0
HanXRQChr09g0266491 Helianthus annuus HOM05D003833 ORTHO05D004209 2.4e-10 68.9 103 47.6
ECA232G1919 Erigeron canadensis HOM05D003833 ORTHO05D004209 2.6e-09 65.5 103 45.6
VMungo1383G2371 Vigna mungo HOM05D003833 ORTHO05D004209 2.6e-09 65.5 103 42.7
Phvul.001G124300 Phaseolus vulgaris HOM05D003833 ORTHO05D004209 7.6e-09 63.9 103 40.8
Lalb_Chr14g0365931 Lupinus albus HOM05D003833 ORTHO05D004209 3.8e-08 61.6 103 39.8
Glyma.19G131500 Glycine max HOM05D003833 ORTHO05D004209 6.4e-08 60.8 103 38.8
Lsat_1_v5_gn_4_129320 Lactuca sativa HOM05D003833 ORTHO05D004209 6.4e-08 60.8 103 41.7
MELO3C019039.2 Cucumis melo HOM05D003833 ORTHO05D004209 8.4e-08 60.5 103 38.8
CsaV3_4G027860 Cucumis sativus L. HOM05D003833 ORTHO05D004209 8.4e-08 60.5 103 38.8
Lj1g0026826 Lotus japonicus HOM05D003833 ORTHO05D004209 8.4e-08 60.5 103 38.8
Glyma.03G129100 Glycine max HOM05D003833 ORTHO05D004209 1.9e-07 59.3 103 38.8
Sc13g0001340 Simmondsia chinensis HOM05D003833 ORTHO05D004209 2.4e-07 58.9 103 40.8
arahy.Tifrunner.gnm1.ann1.LP5CTB Arachis hypogaea HOM05D003833 ORTHO05D004209 5.4e-07 57.8 103 38.8
Cpa.g.sc49.96 Carica papaya HOM05D003833 ORTHO05D004209 5.4e-07 57.8 103 37.9
Ca_08401_v3 Cicer arietinum L. HOM05D003833 ORTHO05D004209 5.4e-07 57.8 103 36.9
Oeu029492.1 Olea europaea HOM05D003833 ORTHO05D004209 5.4e-07 57.8 103 39.8
arahy.Tifrunner.gnm1.ann1.C9KHWR Arachis hypogaea HOM05D003833 ORTHO05D004209 7.1e-07 57.4 103 37.9
Medtr7g090160 Medicago truncatula HOM05D003833 ORTHO05D004209 7.1e-07 57.4 103 36.9
TPR.G9312 Trifolium pratense HOM05D003833 ORTHO05D004209 7.1e-07 57.4 103 36.9
ClCG04G004210 Citrullus lanatus HOM05D003833 ORTHO05D004209 9.3e-07 57.0 103 38.8
Manes.09G008001 Manihot esculenta HOM05D003833 ORTHO05D004209 9.3e-07 57.0 103 37.9
Prupe.7G045500 Prunus persica HOM05D003833 ORTHO05D004209 9.3e-07 57.0 103 38.8
unitig_26.g8850 Utricularia gibba HOM05D003833 ORTHO05D004209 9.3e-07 57.0 103 36.9
CSS0041120 Camellia sinensis var. sinensis HOM05D003833 ORTHO05D004209 1.2e-06 56.6 103 38.8
MD12G1094200 Malus domestica HOM05D003833 ORTHO05D004209 1.2e-06 56.6 103 36.9
Potri.006G042600 Populus trichocarpa HOM05D003833 ORTHO05D004209 1.6e-06 56.2 103 37.9
Dinv34388 Davidia involucrata HOM05D003833 ORTHO05D004209 2.1e-06 55.8 103 39.8
Atru.chr1.1452 Acer truncatum HOM05D003833 ORTHO05D004209 2.7e-06 55.5 103 38.8
Atru.chr1.1464 Acer truncatum HOM05D003833 ORTHO05D004209 2.7e-06 55.5 103 38.8
Gohir.D07G028300 Gossypium hirsutum HOM05D003833 ORTHO05D004209 2.7e-06 55.5 103 38.8
Gorai.001G029600 Gossypium raimondii HOM05D003833 ORTHO05D004209 2.7e-06 55.5 103 38.8
QL07p007726 Quercus lobata HOM05D003833 ORTHO05D004209 2.7e-06 55.5 103 38.8
Sabra06G0028900 Salix brachista HOM05D003833 ORTHO05D004209 2.7e-06 55.5 103 36.9
Duzib093G1609 Durio zibethinus HOM05D003833 ORTHO05D004209 3.5e-06 55.1 103 36.9
PGR142G2709 Punica granatum HOM05D003833 ORTHO05D004209 3.5e-06 55.1 103 35.0
Sed0017232 Sechium edule HOM05D003833 ORTHO05D004209 3.5e-06 55.1 103 37.9
Sc13g0001320 Simmondsia chinensis HOM05D003833 ORTHO05D004209 3.5e-06 55.1 103 38.8
vmacro07822 Vaccinium macrocarpon HOM05D003833 ORTHO05D004209 3.5e-06 55.1 103 37.9
MSTRG.15651 Avicennia marina HOM05D003833 ORTHO05D004209 4.6e-06 54.7 103 39.8
CiPaw.09G044700 Carya illinoinensis HOM05D003833 ORTHO05D004209 4.6e-06 54.7 103 36.9
DCAR_020545 Daucus carota HOM05D003833 ORTHO05D004209 4.6e-06 54.7 103 36.9
RcHm_v2.0_Chr1g0334171 Rosa chinensis HOM05D003833 ORTHO05D004209 4.6e-06 54.7 103 35.9
AL6G25600 Arabidopsis lyrata HOM05D003833 ORTHO05D004209 6.0e-06 54.3 102 37.3
Thecc.05G140900 Theobroma cacao HOM05D003833 ORTHO05D004209 6.0e-06 54.3 103 36.9
Gohir.A07G024700 Gossypium hirsutum HOM05D003833 ORTHO05D004209 7.8e-06 53.9 103 36.9
TAR623G1635 Trochodendron aralioides HOM05D003833 ORTHO05D004209 7.8e-06 53.9 103 37.9
GSVIVG01033588001 Vitis vinifera HOM05D003833 ORTHO05D004209 7.8e-06 53.9 103 37.9


User provided reference genes

Program Settings