Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 0.0e+00 1410.6 794 100.0
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 0.0e+00 1191.0 815 82.1
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 3.0e-305 1051.6 797 76.5
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 8.6e-300 1033.5 796 74.5
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 2.0e-280 969.1 821 68.3
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 5.8e-272 941.0 860 64.1
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 9.0e-265 917.1 822 65.6
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 9.9e-264 913.7 843 63.7
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 1.4e-262 909.8 810 64.2
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 2.4e-262 909.1 799 65.5
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 7.1e-262 907.5 811 62.1
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 2.5e-259 899.0 825 62.4
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 5.6e-259 897.9 823 61.7
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 1.6e-258 896.3 831 63.3
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 2.8e-258 895.6 791 63.1
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 2.8e-258 895.6 829 61.5
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 1.4e-257 893.3 821 63.1
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 5.3e-257 891.3 826 64.3
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 9.0e-257 890.6 817 62.7
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 5.8e-256 887.9 851 60.3
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 7.6e-256 887.5 831 62.7
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 9.9e-256 887.1 836 60.5
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 2.2e-255 885.9 828 61.0
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 1.9e-254 882.9 847 62.0
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 9.3e-254 880.6 808 61.9
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 9.3e-254 880.6 817 62.3
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 2.7e-253 879.0 792 62.8
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 3.5e-253 878.6 824 63.0
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 1.0e-252 877.1 841 62.9
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 1.0e-252 877.1 824 61.3
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 5.1e-252 874.8 840 63.0
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 1.5e-251 873.2 823 60.0
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 9.6e-251 870.5 826 59.8
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 1.6e-250 869.8 826 63.4
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 1.6e-250 869.8 823 61.1
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 2.1e-250 869.4 828 62.0
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 6.2e-250 867.8 822 60.5
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 8.1e-250 867.5 833 59.5
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 8.1e-250 867.5 830 60.0
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 1.4e-249 866.7 790 64.1
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 1.8e-249 866.3 824 60.1
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 4.0e-249 865.1 807 63.4
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 1.2e-248 863.6 765 65.5
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 2.0e-248 862.8 834 60.8
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.0e-247 860.5 817 60.6
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 1.7e-247 859.8 807 63.3
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 2.2e-247 859.4 790 63.7
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 4.9e-247 858.2 809 61.8
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 4.9e-247 858.2 815 62.2
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 6.5e-247 857.8 823 59.9
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.4e-246 856.7 824 59.8
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 2.5e-246 855.9 819 61.3
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 4.2e-246 855.1 794 63.5
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 1.3e-244 850.1 826 62.0
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 3.0e-244 849.0 808 62.5
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 3.9e-244 848.6 802 61.1
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 2.1e-242 842.8 820 60.4
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 2.1e-242 842.8 816 61.3
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 2.1e-242 842.8 817 59.9
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 3.7e-242 842.0 839 60.1
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 2.4e-241 839.3 807 59.7
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 6.9e-241 837.8 814 59.0
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 7.6e-240 834.3 798 63.7
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 5.0e-239 831.6 812 58.1
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 1.9e-238 829.7 818 61.1
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 2.1e-237 826.2 817 57.5
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 2.1e-237 826.2 801 61.5
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 4.6e-237 825.1 805 59.8
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 6.1e-237 824.7 805 59.8
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 2.3e-236 822.8 800 62.9
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 2.5e-235 819.3 841 56.4
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 4.1e-233 812.0 809 60.7
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 5.3e-233 811.6 832 57.9
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 7.7e-232 807.7 808 58.8
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 1.9e-230 803.1 824 57.5
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 2.7e-229 799.3 767 60.0
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 3.6e-229 798.9 740 63.9
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 1.8e-228 796.6 818 57.3
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 2.4e-225 786.2 898 53.6
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 3.1e-225 785.8 779 58.5
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 1.2e-224 783.9 817 58.1
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 1.2e-224 783.9 806 59.1
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 9.4e-222 774.2 794 59.7
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.0e-212 742.3 815 53.9
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 1.6e-208 730.3 821 56.3
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 1.2e-203 714.1 826 55.0
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 1.3e-202 710.7 694 61.0
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 1.7e-202 710.3 820 56.5
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.8e-202 709.5 785 54.6
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 3.1e-201 706.1 827 54.7
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 1.2e-200 704.1 822 50.7
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 1.1e-198 697.6 827 54.3
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 3.2e-198 696.0 827 54.3
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 1.8e-196 690.3 665 60.3
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 2.0e-195 686.8 830 53.9
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 5.7e-195 685.3 824 53.6
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 7.8e-192 674.9 815 54.4
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 1.7e-191 673.7 821 53.1
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 7.3e-190 668.3 828 53.9
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 8.9e-188 661.4 815 51.4
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 4.3e-182 642.5 797 51.3
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 4.9e-178 629.0 801 50.2
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 4.1e-177 625.9 923 45.3
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 5.4e-177 625.5 784 49.9
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 1.3e-175 620.9 825 46.4
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 6.6e-175 618.6 784 49.2
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 8.6e-175 618.2 784 49.5
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 6.4e-170 602.1 795 46.8
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 9.5e-166 588.2 834 45.7
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 1.2e-160 571.2 586 59.9
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 3.5e-160 569.7 752 49.3
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 9.0e-156 555.1 449 65.3
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 2.2e-154 550.4 647 55.2
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 2.8e-149 533.5 698 47.3
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 5.6e-142 509.2 723 45.8
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 2.7e-136 490.3 472 62.7
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 5.1e-135 486.1 471 65.4
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 4.3e-134 483.0 519 58.8
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 2.2e-130 470.7 720 43.3
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.8e-125 453.8 869 40.7
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 4.5e-123 446.4 547 53.0
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 6.5e-122 442.6 886 37.4
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 4.3e-118 429.9 515 56.7
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 1.8e-108 397.9 424 57.8
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 7.7e-107 392.5 350 63.1
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 2.5e-105 387.5 320 64.4
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 4.8e-101 373.2 282 69.1
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 1.5e-97 361.7 818 37.4
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 3.7e-93 347.1 530 40.6
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 9.1e-92 342.4 531 42.0
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 1.0e-90 339.0 647 41.3
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 6.1e-88 329.7 459 42.9
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 3.0e-87 327.4 776 34.5
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 2.7e-83 314.3 897 32.8
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 9.5e-81 305.8 449 45.4
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 6.4e-61 240.0 356 50.3
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 1.7e-58 231.9 794 29.6
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 2.1e-56 224.9 206 62.1
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.9e-55 219.5 383 42.3
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 4.9e-53 213.8 405 41.2
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 4.6e-51 207.2 165 69.7
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.0e-42 177.9 310 42.3
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.6e-42 176.8 331 40.2
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 2.1e-40 171.8 142 62.0
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 4.3e-33 147.5 138 64.5
Actinidia08116 Actinidia chinensis HOM05D003551 ORTHO05D004869 1.7e-29 135.6 135 59.3
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 4.6e-27 127.5 139 51.1
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.3e-25 120.9 143 51.7
Lsat_1_v5_gn_1_12340 Lactuca sativa HOM05D003551 ORTHO05D004869 1.3e-24 119.4 135 57.8
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.8e-23 115.5 276 36.6
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.3e-23 114.0 216 41.7
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 1.2e-22 112.8 150 52.7
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.5e-22 112.5 268 37.7
BcaB07g33803 Brassica carinata HOM05D003551 ORTHO05D032399 7.6e-22 110.2 98 59.2
BcaB06g26385 Brassica carinata HOM05D003551 ORTHO05D016818 9.9e-22 109.8 106 55.7
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 9.9e-22 109.8 337 34.4
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 8.4e-21 106.7 110 58.2
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.2e-20 104.4 229 38.4
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 2.7e-19 101.7 222 35.6
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.3e-18 98.6 155 45.8
HPP92_006872 Vanilla planifolia HOM05D003551 ORTHO05D016818 2.5e-17 95.1 86 53.5
HPP92_006854 Vanilla planifolia HOM05D003551 ORTHO05D016818 3.3e-17 94.7 82 57.3
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.1e-15 89.7 70 67.1
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 9.0e-15 86.7 214 36.4
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.0e-13 83.2 155 40.6
HPP92_028370 Vanilla planifolia HOM05D003551 ORTHO05D016818 2.7e-11 75.1 74 51.4
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.0e-11 73.9 80 50.0
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.3e-10 72.8 148 39.9
Sed0014055 Sechium edule HOM05D003551 ORTHO05D004869 6.7e-10 70.5 112 46.4
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 1.5e-09 69.3 51 74.5
HPP92_006540 Vanilla planifolia HOM05D003551 ORTHO05D016818 4.3e-09 67.8 67 50.7
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 3.7e-08 64.7 55 63.6
HPP92_006537 Vanilla planifolia HOM05D003551 ORTHO05D431158 6.3e-08 63.9 69 53.6
Lalb_Chr05g0228661 Lupinus albus HOM05D003551 ORTHO05D048508 1.4e-07 62.8 127 37.0
HPP92_026933 Vanilla planifolia HOM05D015067 ORTHO05D427257 2.4e-07 62.0 41 70.7
HPP92_027652 Vanilla planifolia HOM05D003551 ORTHO05D016818 2.4e-07 62.0 59 54.2
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 6.9e-07 60.5 80 47.5
arahy.Tifrunner.gnm1.ann1.C8ML0J Arachis hypogaea HOM05D003551 ORTHO05D004869 1.5e-06 59.3 63 50.8
HPP92_028511 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.4e-06 58.2 200 34.0
Lsat_1_v5_gn_2_63120 Lactuca sativa HOM05D005044 ORTHO05D006799 5.9e-06 57.4 86 41.9
HPP92_028506 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.7e-06 57.0 36 80.6


User provided reference genes

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