Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0208301 Helianthus annuus HOM05D000076 ORTHO05D000953 2.9e-31 137.9 68 100.0
HanXRQChr09g0270511 Helianthus annuus HOM05D000076 ORTHO05D000953 4.7e-13 77.4 46 78.3
HanXRQChr16g0501931 Helianthus annuus HOM05D000076 ORTHO05D000953 6.3e-10 67.0 46 65.2
ECA232G1659 Erigeron canadensis HOM05D000076 ORTHO05D000953 8.3e-10 66.6 46 65.2
AUR62032141 Chenopodium quinoa HOM05D000076 ORTHO05D000953 7.0e-09 63.5 46 63.0
AUR62039665 Chenopodium quinoa HOM05D000076 ORTHO05D000953 7.0e-09 63.5 46 63.0
CANSAT80G0118 Cannabis sativa HOM05D000076 ORTHO05D000953 9.1e-09 63.2 46 60.9
EL10Ac5g11194 Beta vulgaris HOM05D000076 ORTHO05D000953 1.2e-08 62.8 46 63.0
Potri.015G048100 Populus trichocarpa HOM05D000076 ORTHO05D000953 2.0e-08 62.0 46 58.7
HanXRQChr04g0109431 Helianthus annuus HOM05D000076 ORTHO05D000953 2.7e-08 61.6 46 58.7
QL10p020879 Quercus lobata HOM05D000076 ORTHO05D000953 3.5e-08 61.2 46 58.7
SalBow7G3471 Salvia bowleyana HOM05D000076 ORTHO05D000953 3.5e-08 61.2 46 58.7
Lsat_1_v5_gn_5_24640 Lactuca sativa HOM05D000076 ORTHO05D000953 4.5e-08 60.8 46 58.7
Lsat_1_v5_gn_4_112420 Lactuca sativa HOM05D000076 ORTHO05D000953 5.9e-08 60.5 46 56.5
Lj4g0014546 Lotus japonicus HOM05D000076 ORTHO05D000953 7.7e-08 60.1 46 52.2
Oeu010196.1 Olea europaea HOM05D000076 ORTHO05D000953 7.7e-08 60.1 46 56.5
Peaxi162Scf00119g00015 Petunia axillaris HOM05D000076 ORTHO05D000953 7.7e-08 60.1 46 56.5
TPR.G2041 Trifolium pratense HOM05D000076 ORTHO05D000953 7.7e-08 60.1 46 54.3
CAN.G982.36 Capsicum annuum HOM05D000076 ORTHO05D000953 1.0e-07 59.7 46 56.5
Cfa017743 Carpinus fangiana HOM05D000076 ORTHO05D000953 1.0e-07 59.7 43 58.1
Lalb_Chr12g0197391 Lupinus albus HOM05D000076 ORTHO05D000953 1.0e-07 59.7 47 53.2
SEGI_34909 Sequoiadendron giganteum HOM05D000076 ORTHO05D000953 1.0e-07 59.7 47 53.2
CDE01G0742 Ceratophyllum demersum HOM05D000076 ORTHO05D000953 1.3e-07 59.3 46 50.0
CDE02G4402 Ceratophyllum demersum HOM05D000076 ORTHO05D000953 1.3e-07 59.3 46 50.0
Haze_18527 Corylus avellana HOM05D000076 ORTHO05D000953 1.3e-07 59.3 43 58.1
Lsat_1_v5_gn_2_65221 Lactuca sativa HOM05D000076 ORTHO05D000953 1.3e-07 59.3 46 54.3
Oeu057228.1 Olea europaea HOM05D000076 ORTHO05D000953 1.3e-07 59.3 46 56.5
Hund02543 Selenicereus undatus HOM05D000076 ORTHO05D000953 1.3e-07 59.3 46 58.7
THA.LOC104820982 Tarenaya hassleriana HOM05D000076 ORTHO05D000953 1.3e-07 59.3 46 54.3
Ca_02996_v3 Cicer arietinum L. HOM05D000076 ORTHO05D000953 1.7e-07 58.9 46 54.3
FvH4_5g13360 Fragaria vesca HOM05D000076 ORTHO05D000953 1.7e-07 58.9 46 54.3
FAN08G2215 Fragaria x ananassa HOM05D000076 ORTHO05D000953 1.7e-07 58.9 46 54.3
FAN13G3225 Fragaria x ananassa HOM05D000076 ORTHO05D000953 1.7e-07 58.9 46 54.3
FAN18G2251 Fragaria x ananassa HOM05D000076 ORTHO05D000953 1.7e-07 58.9 46 54.3
Hma1.2p1_0448F.1_g154840 Hydrangea macrophylla HOM05D000076 ORTHO05D000953 1.7e-07 58.9 46 52.2
MD06G1206100 Malus domestica HOM05D000076 ORTHO05D000953 1.7e-07 58.9 46 54.3
Nitab4.5_0000208g0030 Nicotiana tabacum HOM05D000076 ORTHO05D000953 1.7e-07 58.9 46 54.3
Dinv17464 Davidia involucrata HOM05D000076 ORTHO05D000953 2.3e-07 58.5 46 56.5
Duzib138G0774 Durio zibethinus HOM05D000076 ORTHO05D000953 2.3e-07 58.5 46 54.3
ECA247G1172 Erigeron canadensis HOM05D000076 ORTHO05D000953 2.3e-07 58.5 43 53.5
Rhsim12G0150800 Rhododendron simsii HOM05D000076 ORTHO05D000953 2.3e-07 58.5 46 54.3
CiPaw.16G080400 Carya illinoinensis HOM05D000076 ORTHO05D000953 2.9e-07 58.2 46 56.5
COL.COLO4_28852 Corchorus olitorius HOM05D000076 ORTHO05D000953 2.9e-07 58.2 46 56.5
Lj9C437T16 Lonicera japonica HOM05D000076 ORTHO05D000953 2.9e-07 58.2 46 54.3
Sabra12G0045700 Salix brachista HOM05D000076 ORTHO05D000953 2.9e-07 58.2 46 54.3
Sabra15G0079000 Salix brachista HOM05D000076 ORTHO05D000953 2.9e-07 58.2 46 52.2
arahy.Tifrunner.gnm1.ann1.IQM8GD Arachis hypogaea HOM05D000076 ORTHO05D000953 3.8e-07 57.8 46 54.3
arahy.Tifrunner.gnm1.ann1.X1KTL2 Arachis hypogaea HOM05D000076 ORTHO05D000953 3.8e-07 57.8 46 54.3
COL.COLO4_10656 Corchorus olitorius HOM05D000076 ORTHO05D015756 3.8e-07 57.8 46 54.3
DCAR_010177 Daucus carota HOM05D000076 ORTHO05D000953 3.8e-07 57.8 46 54.3
MD14G1217000 Malus domestica HOM05D000076 ORTHO05D000953 3.8e-07 57.8 46 54.3
THA.LOC104802984 Tarenaya hassleriana HOM05D000076 ORTHO05D000953 3.8e-07 57.8 46 52.2
TAR371G0815 Trochodendron aralioides HOM05D000076 ORTHO05D000953 3.8e-07 57.8 46 52.2
Actinidia04792 Actinidia chinensis HOM05D000076 ORTHO05D000953 5.0e-07 57.4 46 56.5
ECA246G3588 Erigeron canadensis HOM05D000076 ORTHO05D000953 5.0e-07 57.4 46 58.7
Medtr2g059350 Medicago truncatula HOM05D000076 ORTHO05D000953 5.0e-07 57.4 46 54.3
Solyc03g114730.3 Solanum lycopersicum HOM05D000076 ORTHO05D000953 5.0e-07 57.4 46 54.3
Sopen03g033810 Solanum pennellii HOM05D000076 ORTHO05D000953 5.0e-07 57.4 46 54.3
PGSC0003DMG400024619 Solanum tuberosum HOM05D000076 ORTHO05D000953 5.0e-07 57.4 46 54.3
Thecc.03G109600 Theobroma cacao HOM05D000076 ORTHO05D000953 5.0e-07 57.4 46 54.3
Atru.chr9.601 Acer truncatum HOM05D000076 ORTHO05D000953 6.6e-07 57.0 46 52.2
Duzib133G1385 Durio zibethinus HOM05D000076 ORTHO05D000953 6.6e-07 57.0 46 52.2
Lalb_Chr07g0178431 Lupinus albus HOM05D000076 ORTHO05D000953 6.6e-07 57.0 46 52.2
Nitab4.5_0004190g0050 Nicotiana tabacum HOM05D000076 ORTHO05D000953 6.6e-07 57.0 46 54.3
Nitab4.5_0005994g0020 Nicotiana tabacum HOM05D000076 ORTHO05D000953 6.6e-07 57.0 46 52.2
Potri.004G113500 Populus trichocarpa HOM05D000076 ORTHO05D000953 6.6e-07 57.0 43 53.5
Thecc.04G107600 Theobroma cacao HOM05D000076 ORTHO05D000953 6.6e-07 57.0 46 54.3
GSVIVG01008161001 Vitis vinifera HOM05D000076 ORTHO05D000953 6.6e-07 57.0 46 54.3
CSS0028272 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D000953 8.6e-07 56.6 46 52.2
Glyma.04G158600 Glycine max HOM05D000076 ORTHO05D000953 8.6e-07 56.6 46 52.2
Glyma.08G252700 Glycine max HOM05D000076 ORTHO05D000953 8.6e-07 56.6 46 47.8
HanXRQChr02g0043261 Helianthus annuus HOM05D000076 ORTHO05D000953 8.6e-07 56.6 46 50.0
HanXRQChr03g0066621 Helianthus annuus HOM05D000076 ORTHO05D000953 8.6e-07 56.6 46 52.2
Hma1.2p1_0060F.1_g032690 Hydrangea macrophylla HOM05D000076 ORTHO05D000953 8.6e-07 56.6 46 54.3
Lj1g0012607 Lotus japonicus HOM05D000076 ORTHO05D000953 8.6e-07 56.6 46 54.3
Lalb_Chr13g0302661 Lupinus albus HOM05D000076 ORTHO05D000953 8.6e-07 56.6 46 52.2
Potri.012G064200 Populus trichocarpa HOM05D000076 ORTHO05D000953 8.6e-07 56.6 46 52.2
Rhsim08G0142500 Rhododendron simsii HOM05D000076 ORTHO05D000953 8.6e-07 56.6 46 52.2
Sopen06g026640 Solanum pennellii HOM05D000076 ORTHO05D000953 8.6e-07 56.6 46 52.2
TPR.G15317 Trifolium pratense HOM05D000076 ORTHO05D000953 8.6e-07 56.6 46 52.2
TWI60G0020 Tripterygium wilfordii HOM05D000076 ORTHO05D000953 8.6e-07 56.6 46 54.3
GSVIVG01036535001 Vitis vinifera HOM05D000076 ORTHO05D000953 8.6e-07 56.6 46 52.2
Ca_21752_v3 Cicer arietinum L. HOM05D000076 ORTHO05D000953 1.1e-06 56.2 46 50.0
Ciclev10019790m.g Citrus clementina HOM05D000076 ORTHO05D000953 1.1e-06 56.2 46 50.0
Migut.D01609 Erythranthe guttata HOM05D000076 ORTHO05D000953 1.1e-06 56.2 46 52.2
Gohir.A07G178600 Gossypium hirsutum HOM05D000076 ORTHO05D000953 1.1e-06 56.2 46 54.3
Gohir.D07G185700 Gossypium hirsutum HOM05D000076 ORTHO05D000953 1.1e-06 56.2 46 54.3
Gorai.001G206300 Gossypium raimondii HOM05D000076 ORTHO05D000953 1.1e-06 56.2 46 54.3
Lj5A136T90 Lonicera japonica HOM05D000076 ORTHO05D000953 1.1e-06 56.2 43 51.2
Nitab4.5_0003009g0030 Nicotiana tabacum HOM05D000076 ORTHO05D000953 1.1e-06 56.2 46 52.2
Peaxi162Scf00013g00082 Petunia axillaris HOM05D000076 ORTHO05D000953 1.1e-06 56.2 46 52.2
Psat1g125400 Pisum sativum HOM05D000076 ORTHO05D000953 1.1e-06 56.2 46 52.2
PGR042G0546 Punica granatum HOM05D000076 ORTHO05D000953 1.1e-06 56.2 46 50.0
Sabra04G0071800 Salix brachista HOM05D000076 ORTHO05D000953 1.1e-06 56.2 43 55.8
Sed0008998 Sechium edule HOM05D000076 ORTHO05D000953 1.1e-06 56.2 46 54.3
PGSC0003DMG400004078 Solanum tuberosum HOM05D000076 ORTHO05D000953 1.1e-06 56.2 46 52.2
Actinidia10439 Actinidia chinensis HOM05D000076 ORTHO05D000953 1.5e-06 55.8 46 54.3
Aqoxy3G03755 Aquilegia oxysepala HOM05D000076 ORTHO05D000953 1.5e-06 55.8 43 53.5
CiPaw.15G114300 Carya illinoinensis HOM05D000076 ORTHO05D000953 1.5e-06 55.8 47 51.1
DCAR_014020 Daucus carota HOM05D000076 ORTHO05D000953 1.5e-06 55.8 46 52.2
FvH4_6g46300 Fragaria vesca HOM05D000076 ORTHO05D000953 1.5e-06 55.8 43 51.2
FAN02G0739 Fragaria x ananassa HOM05D000076 ORTHO05D000953 1.5e-06 55.8 43 51.2
FAN09G3413 Fragaria x ananassa HOM05D000076 ORTHO05D000953 1.5e-06 55.8 43 51.2
FAN14G5302 Fragaria x ananassa HOM05D000076 ORTHO05D000953 1.5e-06 55.8 43 51.2
Glyma.06G206600 Glycine max HOM05D000076 ORTHO05D000953 1.5e-06 55.8 46 52.2
RcHm_v2.0_Chr2g0164751 Rosa chinensis HOM05D000076 ORTHO05D000953 1.5e-06 55.8 43 51.2
TWI34G0548 Tripterygium wilfordii HOM05D000076 ORTHO05D000953 1.5e-06 55.8 46 52.2
Cfa007700 Carpinus fangiana HOM05D000076 ORTHO05D000953 1.9e-06 55.5 47 46.8
CDE10G0608 Ceratophyllum demersum HOM05D000076 ORTHO05D000953 1.9e-06 55.5 46 47.8
Dinv34903 Davidia involucrata HOM05D000076 ORTHO05D000953 1.9e-06 55.5 46 50.0
Duzib205G1741 Durio zibethinus HOM05D000076 ORTHO05D000953 1.9e-06 55.5 46 52.2
Glyma.05G017900 Glycine max HOM05D000076 ORTHO05D000953 1.9e-06 55.5 46 50.0
Lsat_1_v5_gn_3_96960 Lactuca sativa HOM05D000076 ORTHO05D000953 1.9e-06 55.5 43 48.8
vmacro17660 Vaccinium macrocarpon HOM05D000076 ORTHO05D000953 1.9e-06 55.5 46 52.2
CAN.G587.62 Capsicum annuum HOM05D000076 ORTHO05D000953 2.5e-06 55.1 46 52.2
Glyma.17G082000 Glycine max HOM05D000076 ORTHO05D000953 2.5e-06 55.1 46 50.0
Gohir.A11G034300 Gossypium hirsutum HOM05D000076 ORTHO05D000953 2.5e-06 55.1 46 52.2
Manes.14G089500 Manihot esculenta HOM05D000076 ORTHO05D000953 2.5e-06 55.1 46 52.2
Phvul.004G043700 Phaseolus vulgaris HOM05D000076 ORTHO05D000953 2.5e-06 55.1 43 53.5
Phvul.009G204500 Phaseolus vulgaris HOM05D000076 ORTHO05D000953 2.5e-06 55.1 46 52.2
Psat4g041480 Pisum sativum HOM05D000076 ORTHO05D000953 2.5e-06 55.1 46 45.7
RcHm_v2.0_Chr7g0183771 Rosa chinensis HOM05D000076 ORTHO05D000953 2.5e-06 55.1 46 50.0
Solyc06g069380.4 Solanum lycopersicum HOM05D000076 ORTHO05D000953 2.5e-06 55.1 46 50.0
Atru.chr8.618 Acer truncatum HOM05D000076 ORTHO05D000953 3.3e-06 54.7 43 51.2
Actinidia35053 Actinidia chinensis HOM05D000076 ORTHO05D000953 3.3e-06 54.7 46 50.0
MSTRG.23854 Avicennia marina HOM05D000076 ORTHO05D000953 3.3e-06 54.7 43 51.2
CDE10G0803 Ceratophyllum demersum HOM05D000076 ORTHO05D000953 3.3e-06 54.7 46 47.8
Gohir.A03G071700 Gossypium hirsutum HOM05D000076 ORTHO05D000953 3.3e-06 54.7 46 52.2
Lsat_1_v5_gn_1_15060 Lactuca sativa HOM05D000076 ORTHO05D000953 3.3e-06 54.7 46 52.2
Oeu004431.1 Olea europaea HOM05D000076 ORTHO05D000953 3.3e-06 54.7 43 48.8
PSO017G5584 Papaver somniferum HOM05D000076 ORTHO05D000953 3.3e-06 54.7 46 47.8
PSO478G0090 Papaver somniferum HOM05D000076 ORTHO05D000953 3.3e-06 54.7 46 47.8
Peaxi162Scf00017g03259 Petunia axillaris HOM05D000076 ORTHO05D000953 3.3e-06 54.7 46 52.2
Potri.017G101300 Populus trichocarpa HOM05D000076 ORTHO05D000953 3.3e-06 54.7 43 51.2
PGR083G2551 Punica granatum HOM05D000076 ORTHO05D000953 3.3e-06 54.7 46 52.2
Sabra17G0087100 Salix brachista HOM05D000076 ORTHO05D000953 3.3e-06 54.7 43 51.2
Solyc12g038670.2 Solanum lycopersicum HOM05D000076 ORTHO05D000953 3.3e-06 54.7 46 47.8
TAR622G1372 Trochodendron aralioides HOM05D000076 ORTHO05D000953 3.3e-06 54.7 46 47.8
unitig_22.g6639 Utricularia gibba HOM05D000076 ORTHO05D000953 3.3e-06 54.7 46 54.3
vmacro16475 Vaccinium macrocarpon HOM05D000076 ORTHO05D000953 3.3e-06 54.7 46 52.2
Cpa.g.sc14.240 Carica papaya HOM05D000076 ORTHO05D000953 4.2e-06 54.3 46 50.0
FAN05G0962 Fragaria x ananassa HOM05D000076 ORTHO05D000953 4.2e-06 54.3 43 48.8
Medtr4g110030 Medicago truncatula HOM05D000076 ORTHO05D000953 4.2e-06 54.3 46 47.8
ClCG06G015390 Citrullus lanatus HOM05D000076 ORTHO05D000953 5.5e-06 53.9 46 50.0
Cc04_g08210 Coffea canephora HOM05D000076 ORTHO05D000953 5.5e-06 53.9 46 47.8
Haze_14376 Corylus avellana HOM05D000076 ORTHO05D000953 5.5e-06 53.9 43 46.5
HanXRQChr15g0493931 Helianthus annuus HOM05D000076 ORTHO05D000953 5.5e-06 53.9 43 46.5
Oeu032831.1 Olea europaea HOM05D000076 ORTHO05D000953 5.5e-06 53.9 43 51.2
PGR044G2595 Punica granatum HOM05D000076 ORTHO05D000953 5.5e-06 53.9 46 50.0
SalBow5G3699 Salvia bowleyana HOM05D000076 ORTHO05D000953 5.5e-06 53.9 46 52.2
ATR0691G216 Amborella trichopoda HOM05D000076 ORTHO05D000953 7.2e-06 53.5 43 46.5
MELO3C017256.2 Cucumis melo HOM05D000076 ORTHO05D000953 7.2e-06 53.5 46 50.0
CsaV3_1G003280 Cucumis sativus L. HOM05D000076 ORTHO05D000953 7.2e-06 53.5 46 50.0
Duzib084G0852 Durio zibethinus HOM05D000076 ORTHO05D000953 7.2e-06 53.5 46 50.0
Nitab4.5_0008966g0010 Nicotiana tabacum HOM05D000076 ORTHO05D000953 7.2e-06 53.5 46 50.0
Hund09965 Selenicereus undatus HOM05D000076 ORTHO05D000953 7.2e-06 53.5 46 50.0
Sc10g0009630 Simmondsia chinensis HOM05D000076 ORTHO05D000953 7.2e-06 53.5 46 52.2
Sopen12g018910 Solanum pennellii HOM05D000076 ORTHO05D000953 7.2e-06 53.5 46 47.8
unitig_8.g3285 Utricularia gibba HOM05D000076 ORTHO05D006976 7.2e-06 53.5 42 52.4
MSTRG.4497 Avicennia marina HOM05D000076 ORTHO05D000953 9.5e-06 53.1 46 52.2
Gohir.D11G037800 Gossypium hirsutum HOM05D000076 ORTHO05D000953 9.5e-06 53.1 46 50.0
Gorai.001G066600 Gossypium raimondii HOM05D000076 ORTHO05D000953 9.5e-06 53.1 46 50.0
Gorai.007G040500 Gossypium raimondii HOM05D000076 ORTHO05D000953 9.5e-06 53.1 46 50.0
Lj4C125T1 Lonicera japonica HOM05D000076 ORTHO05D000953 9.5e-06 53.1 46 50.0
Prupe.5G210400 Prunus persica HOM05D000076 ORTHO05D000953 9.5e-06 53.1 46 50.0
SalBow1G7031 Salvia bowleyana HOM05D000076 ORTHO05D000953 9.5e-06 53.1 46 47.8
Sed0011092 Sechium edule HOM05D000076 ORTHO05D000953 9.5e-06 53.1 46 47.8
TWI15G0697 Tripterygium wilfordii HOM05D000076 ORTHO05D000953 9.5e-06 53.1 46 52.2
TWI60G1088 Tripterygium wilfordii HOM05D000076 ORTHO05D000953 9.5e-06 53.1 46 52.2


User provided reference genes

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