Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 3.6e-160 568.5 370 100.0
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 1.5e-134 483.4 371 81.9
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 2.2e-101 373.2 243 86.8
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 1.4e-98 364.0 369 58.8
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 3.0e-98 362.8 369 66.7
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 4.1e-95 352.4 371 65.0
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 5.4e-95 352.1 369 54.5
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 9.1e-95 351.3 367 65.1
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 3.5e-94 349.4 370 55.4
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 4.5e-94 349.0 369 65.3
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 7.7e-94 348.2 367 56.9
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 1.0e-93 347.8 368 55.4
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 1.3e-93 347.4 373 60.9
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 1.3e-93 347.4 370 64.3
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 5.0e-93 345.5 372 62.9
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 6.6e-93 345.1 353 59.5
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 8.6e-93 344.7 368 54.6
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 8.6e-93 344.7 368 55.4
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 8.6e-93 344.7 368 55.4
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 8.6e-93 344.7 369 53.4
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 8.6e-93 344.7 370 60.0
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 1.1e-92 344.4 367 55.6
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 1.1e-92 344.4 396 56.8
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 1.9e-92 343.6 369 56.4
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 2.5e-92 343.2 370 63.5
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 7.2e-92 341.7 367 67.8
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 7.2e-92 341.7 367 67.8
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 2.1e-91 340.1 367 62.7
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 2.8e-91 339.7 368 58.7
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 6.1e-91 338.6 368 56.5
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 6.1e-91 338.6 368 56.5
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 6.1e-91 338.6 367 58.3
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 1.0e-90 337.8 368 55.4
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 1.8e-90 337.0 369 62.1
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 6.8e-90 335.1 368 58.7
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 2.6e-89 333.2 371 57.7
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 2.6e-89 333.2 368 57.1
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 3.4e-89 332.8 368 55.4
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 5.7e-89 332.0 367 56.1
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 9.8e-89 331.3 377 57.6
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 1.3e-88 330.9 368 66.0
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 1.3e-88 330.9 372 61.3
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 1.7e-88 330.5 367 57.8
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 1.7e-88 330.5 371 62.0
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 2.2e-88 330.1 375 58.9
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 2.9e-88 329.7 373 67.3
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 4.9e-88 328.9 368 60.6
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 1.4e-87 327.4 369 58.3
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 1.8e-87 327.0 372 59.7
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 3.2e-87 326.2 369 58.0
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 5.4e-87 325.5 373 58.4
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 1.2e-86 324.3 370 57.6
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 2.7e-86 323.2 367 55.6
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 3.5e-86 322.8 368 57.3
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 2.3e-85 320.1 370 61.9
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 3.9e-85 319.3 371 58.8
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 6.6e-85 318.5 367 66.5
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 8.6e-85 318.2 367 67.6
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 1.1e-84 317.8 373 53.1
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 1.5e-84 317.4 369 60.7
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 1.9e-84 317.0 373 53.1
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 1.9e-84 317.0 373 55.5
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 3.3e-84 316.2 370 56.2
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 1.2e-83 314.3 368 57.9
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 1.6e-83 313.9 368 64.4
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 4.7e-83 312.4 370 54.6
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 6.2e-83 312.0 367 61.0
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 1.0e-82 311.2 370 54.9
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.0e-82 311.2 370 54.9
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 1.0e-82 311.2 370 54.9
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 6.8e-82 308.5 241 67.2
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 1.2e-81 307.8 368 55.7
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 2.0e-81 307.0 191 78.0
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 5.8e-81 305.4 420 54.8
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 7.5e-81 305.1 370 51.1
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 1.3e-80 304.3 192 77.1
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 1.4e-79 300.8 190 76.3
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 5.4e-79 298.9 366 51.1
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 7.0e-79 298.5 241 68.0
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 1.2e-78 297.7 367 53.7
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 1.2e-78 297.7 241 67.2
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 2.7e-78 296.6 242 66.5
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 4.6e-78 295.8 368 49.2
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 1.0e-77 294.7 386 54.9
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 1.5e-76 290.8 192 72.4
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 3.3e-76 289.7 370 52.4
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 4.3e-76 289.3 192 71.4
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 2.3e-74 283.5 192 71.4
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 1.2e-73 281.2 378 46.8
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 1.3e-72 277.7 191 70.2
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 3.7e-72 276.2 392 58.7
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 1.9e-71 273.9 240 59.6
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 3.5e-70 269.6 371 45.6
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 8.6e-69 265.0 449 47.4
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 6.8e-66 255.4 368 50.5
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 2.7e-62 243.4 217 61.3
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 4.3e-60 236.1 194 60.3
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 4.3e-60 236.1 193 59.6
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 5.6e-60 235.7 190 61.1
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 8.1e-59 231.9 305 50.8
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 2.4e-58 230.3 187 63.1
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 5.2e-58 229.2 309 57.3
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 1.5e-57 227.6 309 57.0
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 2.5e-52 210.3 300 64.7
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 2.8e-51 206.8 309 51.8
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 7.6e-49 198.7 191 52.9
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 3.8e-48 196.4 184 54.3
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 1.1e-47 194.9 173 54.3
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 1.6e-46 191.0 182 52.2
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 9.6e-44 181.8 191 47.6
BcaC06g33898 Brassica carinata HOM05D006540 ORTHO05D008202 9.3e-23 112.1 80 63.8
Cre12.g528050 Chlamydomonas reinhardtii HOM05D006540 ORTHO05D008202 5.1e-21 106.3 192 35.9
CBR_g8379 Chara braunii HOM05D006540 ORTHO05D008202 1.8e-18 97.8 133 42.1
MCO07G599 Micromonas commoda HOM05D006540 ORTHO05D008202 1.5e-17 94.7 159 35.8
PRCOL_00004949 Prasinoderma coloniale HOM05D006540 ORTHO05D008202 1.7e-16 91.3 190 33.2
Oeu029879.1 Olea europaea HOM05D006540 ORTHO05D008202 7.2e-15 85.9 72 58.3
RcHm_v2.0_Chr5g0067811 Rosa chinensis HOM05D006540 ORTHO05D008202 2.1e-14 84.3 49 77.6
QL04p066147 Quercus lobata HOM05D006540 ORTHO05D008202 3.7e-11 73.6 47 74.5
unitig_744.g24293 Utricularia gibba HOM05D006540 ORTHO05D008202 6.5e-08 62.8 44 56.8
Pp3c6_29630 Physcomitrium patens HOM05D006540 ORTHO05D008202 4.7e-06 56.6 75 41.3


User provided reference genes

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