Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr08g0208071 Helianthus annuus HOM05D005895 ORTHO05D007916 0.0e+00 1250.0 647 100.0
ECA233G5390 Erigeron canadensis HOM05D005895 ORTHO05D007916 3.1e-271 938.3 549 84.9
Lsat_1_v5_gn_8_150700 Lactuca sativa HOM05D005895 ORTHO05D007916 1.4e-255 886.3 594 76.1
CSS0018548 Camellia sinensis var. sinensis HOM05D005895 ORTHO05D007916 2.1e-251 872.5 602 73.9
DCAR_007061 Daucus carota HOM05D005895 ORTHO05D007916 1.6e-248 862.8 595 72.8
Lj6A811T72 Lonicera japonica HOM05D005895 ORTHO05D007916 3.4e-246 855.1 598 72.2
CiPaw.05G183400 Carya illinoinensis HOM05D005895 ORTHO05D007916 2.2e-245 852.4 587 73.6
vmacro01130 Vaccinium macrocarpon HOM05D005895 ORTHO05D007916 2.2e-245 852.4 635 69.8
Cfa009199 Carpinus fangiana HOM05D005895 ORTHO05D007916 4.9e-245 851.3 601 72.5
Haze_12237 Corylus avellana HOM05D005895 ORTHO05D007916 6.4e-245 850.9 601 72.5
TAR371G0306 Trochodendron aralioides HOM05D005895 ORTHO05D007916 6.4e-245 850.9 580 74.0
Actinidia27801 Actinidia chinensis HOM05D005895 ORTHO05D007916 1.9e-244 849.4 543 77.2
Potri.010G044900 Populus trichocarpa HOM05D005895 ORTHO05D007916 5.4e-244 847.8 549 76.1
GSVIVG01004086001 Vitis vinifera HOM05D005895 ORTHO05D007916 7.1e-244 847.4 549 76.3
Ciclev10030909m.g Citrus clementina HOM05D005895 ORTHO05D007916 8.7e-242 840.5 564 74.3
Gohir.A04G136400 Gossypium hirsutum HOM05D005895 ORTHO05D007916 1.9e-241 839.3 597 70.9
QL03p058522 Quercus lobata HOM05D005895 ORTHO05D007916 1.9e-241 839.3 586 72.5
Atru.chr11.2117 Acer truncatum HOM05D005895 ORTHO05D007916 3.3e-241 838.6 545 75.6
MBI10_g00734_MAGBIO Magnolia biondii HOM05D005895 ORTHO05D007916 5.6e-241 837.8 540 76.5
CAN.G7.20 Capsicum annuum HOM05D005895 ORTHO05D007916 7.4e-241 837.4 539 77.4
Atru.chr11.2133 Acer truncatum HOM05D005895 ORTHO05D007916 9.6e-241 837.0 545 75.6
MELO3C011963.2 Cucumis melo HOM05D005895 ORTHO05D007916 9.6e-241 837.0 602 71.4
Gorai.012G172600 Gossypium raimondii HOM05D005895 ORTHO05D007916 3.7e-240 835.1 597 70.5
CANSAT01G2589 Cannabis sativa HOM05D005895 ORTHO05D007916 4.8e-240 834.7 576 73.6
Solyc04g025540.3 Solanum lycopersicum HOM05D005895 ORTHO05D007916 4.8e-240 834.7 545 76.3
CsaV3_5G031240 Cucumis sativus L. HOM05D005895 ORTHO05D007916 8.1e-240 833.9 602 71.4
Eucgr.H02516 Eucalyptus grandis HOM05D005895 ORTHO05D007916 1.4e-239 833.2 524 78.1
Sopen04g012770 Solanum pennellii HOM05D005895 ORTHO05D007916 1.4e-239 833.2 573 74.2
COL.COLO4_24246 Corchorus olitorius HOM05D005895 ORTHO05D007916 1.8e-239 832.8 588 72.4
arahy.Tifrunner.gnm1.ann1.LQ91H7 Arachis hypogaea HOM05D005895 ORTHO05D007916 3.1e-239 832.0 540 76.1
Sabra10G0023200 Salix brachista HOM05D005895 ORTHO05D007916 3.1e-239 832.0 563 73.4
TWI36G0590 Tripterygium wilfordii HOM05D005895 ORTHO05D007916 6.9e-239 830.9 597 70.7
Migut.E00194 Erythranthe guttata HOM05D005895 ORTHO05D007916 7.6e-238 827.4 593 71.3
Prupe.1G247400 Prunus persica HOM05D005895 ORTHO05D007916 2.2e-237 825.9 550 74.0
Ah.03g133150 Amaranthus hybridus HOM05D005895 ORTHO05D007916 1.4e-236 823.2 548 74.6
MD13G1098000 Malus domestica HOM05D005895 ORTHO05D007916 2.4e-236 822.4 543 74.4
Sed0023548 Sechium edule HOM05D005895 ORTHO05D007916 2.4e-236 822.4 599 71.1
Hund06020 Selenicereus undatus HOM05D005895 ORTHO05D007916 2.4e-236 822.4 554 73.5
Thecc.02G257400 Theobroma cacao HOM05D005895 ORTHO05D007916 5.5e-236 821.2 545 75.8
AUR62024296 Chenopodium quinoa HOM05D005895 ORTHO05D007916 1.2e-235 820.1 556 73.0
RcHm_v2.0_Chr4g0433361 Rosa chinensis HOM05D005895 ORTHO05D007916 1.2e-235 820.1 597 69.3
Aqoxy5G03807 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 1.6e-235 819.7 596 70.8
TPR.G34672 Trifolium pratense HOM05D005895 ORTHO05D007916 2.7e-235 818.9 547 73.9
Medtr8g069525 Medicago truncatula HOM05D005895 ORTHO05D007916 6.0e-235 817.8 549 73.6
SalBow8G2958 Salvia bowleyana HOM05D005895 ORTHO05D007916 6.0e-235 817.8 540 75.2
Cpa.g.sc33.4 Carica papaya HOM05D005895 ORTHO05D007916 7.9e-235 817.4 554 74.5
Glyma.08G283100 Glycine max HOM05D005895 ORTHO05D007916 7.9e-235 817.4 538 74.9
PGR119G2505 Punica granatum HOM05D005895 ORTHO05D007916 1.0e-234 817.0 551 74.0
AUR62005446 Chenopodium quinoa HOM05D005895 ORTHO05D007916 1.3e-234 816.6 543 74.0
Cc04_g11160 Coffea canephora HOM05D005895 ORTHO05D007916 2.3e-234 815.8 553 74.1
MD16G1098900 Malus domestica HOM05D005895 ORTHO05D007916 1.9e-233 812.8 543 73.1
FvH4_4g25910 Fragaria vesca HOM05D005895 ORTHO05D007916 2.5e-233 812.4 544 73.0
EL10Ac6g13787 Beta vulgaris HOM05D005895 ORTHO05D007916 4.3e-233 811.6 577 71.2
Gohir.D04G179500 Gossypium hirsutum HOM05D005895 ORTHO05D007916 4.3e-233 811.6 533 75.4
AT1G70570 Arabidopsis thaliana HOM05D005895 ORTHO05D007916 1.6e-232 809.7 543 73.8
THA.LOC104822982 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 1.1e-231 807.0 543 73.7
CARHR063780 Cardamine hirsuta HOM05D005895 ORTHO05D007916 1.4e-231 806.6 598 69.7
AL2G29960 Arabidopsis lyrata HOM05D005895 ORTHO05D007916 1.8e-231 806.2 551 72.6
Sp5g25720 Schrenkiella parvula HOM05D005895 ORTHO05D007916 3.1e-231 805.4 595 68.9
VMungo0251G0514 Vigna mungo HOM05D005895 ORTHO05D007916 3.1e-231 805.4 549 72.1
Lalb_Chr05g0228401 Lupinus albus HOM05D005895 ORTHO05D007916 1.2e-230 803.5 542 73.2
Lj4g0008127 Lotus japonicus HOM05D005895 ORTHO05D007916 1.5e-230 803.1 537 74.1
PSO017G6602 Papaver somniferum HOM05D005895 ORTHO05D007916 1.5e-230 803.1 576 71.0
A02p16660 Brassica napus HOM05D005895 ORTHO05D007916 4.5e-230 801.6 553 71.8
Carub.0002s1729 Capsella rubella HOM05D005895 ORTHO05D007916 5.8e-230 801.2 543 72.9
FAN07G1086 Fragaria x ananassa HOM05D005895 ORTHO05D007916 7.6e-230 800.8 544 72.2
BraA02t06722Z Brassica rapa HOM05D005895 ORTHO05D007916 1.0e-229 800.4 544 72.6
BcaB05g24593 Brassica carinata HOM05D005895 ORTHO05D007916 1.3e-229 800.0 543 72.6
FAN12G2739 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.3e-229 800.0 542 72.3
FAN12G1268 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.7e-229 799.7 544 72.2
Thhalv10018314m.g Eutrema salsugineum HOM05D005895 ORTHO05D007916 2.2e-229 799.3 566 70.8
Gorai.005G179700 Gossypium raimondii HOM05D005895 ORTHO05D007916 4.9e-229 798.1 538 74.5
Aa31LG4G10380 Aethionema arabicum HOM05D005895 ORTHO05D007916 6.5e-229 797.7 546 72.5
PSO478G2260 Papaver somniferum HOM05D005895 ORTHO05D007916 1.1e-228 797.0 547 73.3
C02p27920 Brassica napus HOM05D005895 ORTHO05D007916 5.5e-228 794.7 544 72.2
BolC2t08837H Brassica oleracea HOM05D005895 ORTHO05D007916 5.5e-228 794.7 544 72.2
Sc04g0009430 Simmondsia chinensis HOM05D005895 ORTHO05D007916 5.5e-228 794.7 530 74.3
FAN17G0264 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.0e-226 790.4 575 68.9
Nitab4.5_0006332g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 5.3e-223 778.1 539 72.7
BcaC03g15207 Brassica carinata HOM05D005895 ORTHO05D007916 9.0e-223 777.3 531 72.3
Aqoxy3G01161 Aquilegia oxysepala HOM05D005895 ORTHO05D007916 2.7e-219 765.8 536 70.7
Nn4g22655 Nelumbo nucifera HOM05D005895 ORTHO05D007916 1.4e-218 763.5 548 71.4
FAN22G0931 Fragaria x ananassa HOM05D005895 ORTHO05D007916 2.4e-215 752.7 577 66.4
Gohir.D02G159600 Gossypium hirsutum HOM05D005895 ORTHO05D007916 3.4e-214 748.8 527 72.3
HPP92_003081 Vanilla planifolia HOM05D005895 ORTHO05D007916 4.5e-214 748.4 560 68.0
ClCG05G025660 Citrullus lanatus HOM05D005895 ORTHO05D007916 2.9e-213 745.7 544 71.5
ATR0585G083 Amborella trichopoda HOM05D005895 ORTHO05D007916 1.6e-211 740.0 552 69.2
Os02g0131200 Oryza sativa ssp. japonica HOM05D005895 ORTHO05D007916 1.4e-210 736.9 526 70.3
Nitab4.5_0000370g0030 Nicotiana tabacum HOM05D005895 ORTHO05D007916 1.3e-208 730.3 539 69.4
Zm00001eb231230 Zea mays HOM05D005895 ORTHO05D007916 6.3e-208 728.0 525 68.8
Phvul.003G063900 Phaseolus vulgaris HOM05D005895 ORTHO05D007916 2.9e-205 719.2 461 75.3
Oeu059911.1 Olea europaea HOM05D005895 ORTHO05D007916 5.0e-205 718.4 529 69.9
Manes.12G024300 Manihot esculenta HOM05D005895 ORTHO05D007916 1.9e-204 716.5 474 74.9
arahy.Tifrunner.gnm1.ann1.0I87EX Arachis hypogaea HOM05D005895 ORTHO05D007916 9.4e-204 714.1 469 74.8
Psat0s3772g0040 Pisum sativum HOM05D005895 ORTHO05D007916 1.1e-199 700.7 480 72.1
MSTRG.2417 Avicennia marina HOM05D005895 ORTHO05D007916 9.1e-199 697.6 442 77.1
Manes.13G025800 Manihot esculenta HOM05D005895 ORTHO05D007916 2.9e-197 692.6 475 73.5
Ca_22578_v3 Cicer arietinum L. HOM05D005895 ORTHO05D007916 2.7e-195 686.0 469 71.0
Mapoly0129s0050 Marchantia polymorpha HOM05D005895 ORTHO05D007916 1.3e-189 667.2 508 65.2
unitig_52.g17177 Utricularia gibba HOM05D005895 ORTHO05D007916 6.5e-189 664.8 518 65.8
Sed0009772 Sechium edule HOM05D005895 ORTHO05D007916 1.8e-186 656.8 447 73.8
Zm00001eb209010 Zea mays HOM05D005895 ORTHO05D007916 5.2e-186 655.2 525 66.5
THA.LOC104818151 Tarenaya hassleriana HOM05D005895 ORTHO05D007916 8.8e-186 654.4 446 72.6
Gohir.A03G136300 Gossypium hirsutum HOM05D005895 ORTHO05D007916 5.7e-185 651.7 493 67.1
Pp3c12_14340 Physcomitrium patens HOM05D005895 ORTHO05D007916 1.8e-183 646.7 501 64.3
Peaxi162Scf01242g00143 Petunia axillaris HOM05D005895 ORTHO05D007916 1.2e-182 644.0 396 79.0
Duzib251G0200 Durio zibethinus HOM05D005895 ORTHO05D007916 8.0e-179 631.3 540 62.4
SMO119G0060 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 8.0e-171 604.7 506 60.3
AagrBONN_evm.TU.Sc2ySwM_368.1304 Anthoceros agrestis HOM05D005895 ORTHO05D007916 1.7e-160 570.5 446 63.7
Dinv24803 Davidia involucrata HOM05D005895 ORTHO05D007916 8.6e-157 558.1 337 82.2
Pp3c10_19590 Physcomitrium patens HOM05D005895 ORTHO05D007916 1.3e-125 454.5 345 62.6
SHI17741 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-89 334.0 385 49.4
FAN18G3006 Fragaria x ananassa HOM05D005895 ORTHO05D007916 1.9e-87 327.8 200 77.0
CBR_g37586 Chara braunii HOM05D000019 ORTHO05D000048 8.3e-67 259.2 276 49.3
SEGI_05407 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 1.9e-50 204.9 141 70.2
CBR_g37584 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-48 199.1 208 48.6
Peaxi162Scf02256g00001 Petunia axillaris HOM05D005895 ORTHO05D007916 5.6e-47 193.4 135 70.4
SEGI_24305 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 1.3e-40 172.2 100 78.0
BcaB08g34808 Brassica carinata HOM05D005895 ORTHO05D007916 9.9e-36 156.0 102 70.6
SEGI_08481 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 1.3e-35 155.6 101 72.3
DCAR_028023 Daucus carota HOM05D005895 ORTHO05D007916 5.8e-28 130.2 78 80.8
Rhsim12G0041200 Rhododendron simsii HOM05D005895 ORTHO05D007916 2.5e-23 114.8 73 72.6
Ah.07g201790 Amaranthus hybridus HOM05D005895 ORTHO05D007916 7.3e-23 113.2 66 77.3
BcaB05g24594 Brassica carinata HOM05D005895 ORTHO05D012801 3.4e-20 104.4 74 67.6
HanXRQChr01g0028641 Helianthus annuus HOM05D005895 ORTHO05D226758 9.9e-20 102.8 58 89.7
DCAR_029453 Daucus carota HOM05D005895 ORTHO05D007916 3.8e-19 100.9 67 70.1
A02p16670 Brassica napus HOM05D005895 ORTHO05D012801 5.4e-18 97.1 65 70.8
BraA02t06723Z Brassica rapa HOM05D005895 ORTHO05D012801 5.4e-18 97.1 65 70.8
CSS0038190 Camellia sinensis var. sinensis HOM05D033929 ORTHO05D026310 1.2e-17 95.9 73 67.1
C02p27930 Brassica napus HOM05D005895 ORTHO05D012801 1.0e-16 92.8 67 67.2
BolC2t08838H Brassica oleracea HOM05D005895 ORTHO05D012801 1.0e-16 92.8 67 67.2
Gorai.012G172500 Gossypium raimondii HOM05D005895 ORTHO05D007916 1.8e-13 82.0 53 73.6
SMO163G0072 Selaginella moellendorffii HOM05D005895 ORTHO05D007916 2.4e-13 81.6 136 36.8
SEGI_38231 Sequoiadendron giganteum HOM05D005895 ORTHO05D007916 2.8e-06 58.2 38 71.1


User provided reference genes

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