Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0205281 Helianthus annuus HOM05D000071 ORTHO05D000029 4.8e-81 306.2 243 100.0
HanXRQChr07g0205301 Helianthus annuus HOM05D000021 ORTHO05D000010 1.2e-44 185.3 272 69.9
HanXRQChr07g0205371 Helianthus annuus HOM05D000021 ORTHO05D000010 5.7e-42 176.4 267 67.0
HanXRQChr07g0205691 Helianthus annuus HOM05D000071 ORTHO05D000029 9.8e-42 175.6 273 72.9
HanXRQChr07g0205401 Helianthus annuus HOM05D000071 ORTHO05D000029 3.1e-40 170.6 271 67.2
HanXRQChr07g0205341 Helianthus annuus HOM05D000071 ORTHO05D000029 9.1e-40 169.1 271 67.2
HanXRQChr07g0205321 Helianthus annuus HOM05D000071 ORTHO05D000029 1.9e-37 161.4 271 64.2
HanXRQChr07g0205261 Helianthus annuus HOM05D000071 ORTHO05D000029 5.5e-37 159.8 272 64.7
HanXRQChr07g0205431 Helianthus annuus HOM05D000071 ORTHO05D000029 4.7e-36 156.8 271 63.8
HanXRQChr07g0205721 Helianthus annuus HOM05D000071 ORTHO05D000029 5.9e-31 139.8 272 62.1
HanXRQChr07g0205701 Helianthus annuus HOM05D000071 ORTHO05D000010 8.6e-30 136.0 272 64.0
HanXRQChr07g0205361 Helianthus annuus HOM05D000071 ORTHO05D000010 2.6e-26 124.4 272 58.5
HanXRQChr07g0205671 Helianthus annuus HOM05D000071 ORTHO05D000010 3.7e-25 120.6 272 58.1
HanXRQChr07g0205441 Helianthus annuus HOM05D000071 ORTHO05D000029 4.3e-21 107.1 127 80.3
HanXRQChr04g0098591 Helianthus annuus HOM05D000071 ORTHO05D000029 9.8e-18 95.9 80 66.2
ECA234G3402 Erigeron canadensis HOM05D000076 ORTHO05D001279 1.0e-14 85.9 79 62.0
ECA234G0408 Erigeron canadensis HOM05D000071 ORTHO05D000029 5.0e-14 83.6 273 53.1
HanXRQChr07g0205661 Helianthus annuus HOM05D000071 ORTHO05D000029 5.0e-14 83.6 79 60.8
HanXRQChr04g0099371 Helianthus annuus HOM05D000071 ORTHO05D000029 1.1e-13 82.4 79 57.0
HanXRQChr14g0426821 Helianthus annuus HOM05D000071 ORTHO05D000029 1.1e-13 82.4 79 55.7
HanXRQChr14g0426831 Helianthus annuus HOM05D000071 ORTHO05D000029 1.1e-13 82.4 79 55.7
HanXRQChr04g0099441 Helianthus annuus HOM05D000071 ORTHO05D000029 1.5e-13 82.0 79 57.0
HanXRQChr04g0098441 Helianthus annuus HOM05D000071 ORTHO05D000029 1.9e-13 81.6 79 58.2
HanXRQChr14g0426711 Helianthus annuus HOM05D000071 ORTHO05D000029 1.9e-13 81.6 77 55.8
HanXRQChr04g0098921 Helianthus annuus HOM05D000071 ORTHO05D000029 3.3e-13 80.9 180 57.2
HanXRQChr04g0098811 Helianthus annuus HOM05D000071 ORTHO05D000029 4.3e-13 80.5 79 58.2
HanXRQChr10g0317241 Helianthus annuus HOM05D000071 ORTHO05D000029 4.3e-13 80.5 79 58.2
HanXRQChr07g0204711 Helianthus annuus HOM05D000071 ORTHO05D000029 5.6e-13 80.1 86 57.0
ECA238G4017 Erigeron canadensis HOM05D000071 ORTHO05D000029 7.3e-13 79.7 78 57.7
HanXRQChr04g0098701 Helianthus annuus HOM05D000071 ORTHO05D000029 7.3e-13 79.7 79 58.2
HanXRQChr04g0098831 Helianthus annuus HOM05D000071 ORTHO05D000029 7.3e-13 79.7 79 58.2
HanXRQChr04g0099691 Helianthus annuus HOM05D000071 ORTHO05D000029 7.3e-13 79.7 80 57.5
ECA233G2362 Erigeron canadensis HOM05D000071 ORTHO05D000029 1.6e-12 78.6 84 54.8
ECA246G1828 Erigeron canadensis HOM05D000071 ORTHO05D000029 1.6e-12 78.6 79 55.7
HanXRQChr07g0205211 Helianthus annuus HOM05D000071 ORTHO05D000029 1.6e-12 78.6 79 57.0
HanXRQChr14g0426751 Helianthus annuus HOM05D000071 ORTHO05D000029 2.1e-12 78.2 131 51.9
ECA238G0112 Erigeron canadensis HOM05D000071 ORTHO05D000029 3.6e-12 77.4 81 55.6
ECA238G0300 Erigeron canadensis HOM05D000071 ORTHO05D000029 3.6e-12 77.4 81 54.3
HanXRQChr14g0426801 Helianthus annuus HOM05D000071 ORTHO05D000029 4.7e-12 77.0 79 54.4
HanXRQChr04g0099731 Helianthus annuus HOM05D000071 ORTHO05D000029 1.1e-11 75.9 80 55.0
HanXRQChr04g0099761 Helianthus annuus HOM05D000071 ORTHO05D000029 1.4e-11 75.5 130 66.9
ECA248G2526 Erigeron canadensis HOM05D000071 ORTHO05D000029 1.8e-11 75.1 78 52.6
HanXRQChr17g0552541 Helianthus annuus HOM05D000071 ORTHO05D000029 1.8e-11 75.1 88 52.3
HanXRQChr13g0409251 Helianthus annuus HOM05D000071 ORTHO05D000029 4.0e-11 73.9 79 58.2
Lsat_1_v5_gn_2_127200 Lactuca sativa HOM05D000071 ORTHO05D000029 2.6e-10 71.2 79 51.9
HanXRQChr14g0461071 Helianthus annuus HOM05D000071 ORTHO05D000029 3.4e-10 70.9 73 56.2
ECA238G0893 Erigeron canadensis HOM05D000071 ORTHO05D000029 1.3e-09 68.9 272 40.8
ECA232G1632 Erigeron canadensis HOM05D000071 ORTHO05D000029 2.9e-09 67.8 74 51.4
HanXRQChr07g0205191 Helianthus annuus HOM05D000071 ORTHO05D000029 4.9e-09 67.0 72 54.2
vmacro06853 Vaccinium macrocarpon HOM05D000071 ORTHO05D000029 6.4e-09 66.6 74 48.6
ECA246G5040 Erigeron canadensis HOM05D000071 ORTHO05D000029 1.4e-08 65.5 77 48.1
Gohir.A11G293341 Gossypium hirsutum HOM05D000071 ORTHO05D000029 1.4e-08 65.5 79 48.1
Gohir.A11G293482 Gossypium hirsutum HOM05D000071 ORTHO05D000029 1.4e-08 65.5 79 48.1
HanXRQChr14g0461061 Helianthus annuus HOM05D000071 ORTHO05D000029 1.4e-08 65.5 80 51.2
vmacro10345 Vaccinium macrocarpon HOM05D000071 ORTHO05D000029 1.4e-08 65.5 91 40.7
ECA248G0680 Erigeron canadensis HOM05D001368 ORTHO05D003846 1.9e-08 65.1 79 49.4
HanXRQChr07g0204681 Helianthus annuus HOM05D000071 ORTHO05D000029 1.9e-08 65.1 76 50.0
ECA233G2812 Erigeron canadensis HOM05D000013 ORTHO05D000011 2.4e-08 64.7 77 45.5
ECA238G0017 Erigeron canadensis HOM05D000071 ORTHO05D003088 3.2e-08 64.3 76 50.0
Gohir.D11G299706 Gossypium hirsutum HOM05D000071 ORTHO05D000029 4.1e-08 63.9 173 49.1
Gohir.D11G307632 Gossypium hirsutum HOM05D000071 ORTHO05D000029 4.1e-08 63.9 173 49.1
Gorai.007G339600 Gossypium raimondii HOM05D000071 ORTHO05D000029 4.1e-08 63.9 73 46.6
HanXRQChr07g0205181 Helianthus annuus HOM05D000071 ORTHO05D000029 5.4e-08 63.5 76 50.0
Gohir.A07G088901 Gossypium hirsutum HOM05D000071 ORTHO05D000029 7.1e-08 63.2 265 34.0
ECA238G4629 Erigeron canadensis HOM05D000071 ORTHO05D000029 1.2e-07 62.4 67 53.7
FAN01G0842 Fragaria x ananassa HOM05D000071 ORTHO05D000029 1.2e-07 62.4 80 42.5
HanXRQChr12g0370831 Helianthus annuus HOM05D000071 ORTHO05D000029 1.2e-07 62.4 77 46.8
Gohir.A11G293600 Gossypium hirsutum HOM05D000071 ORTHO05D000029 1.6e-07 62.0 73 46.6
Gohir.D11G308300 Gossypium hirsutum HOM05D000071 ORTHO05D000029 1.6e-07 62.0 239 27.2
Gorai.007G336100 Gossypium raimondii HOM05D000071 ORTHO05D000029 1.6e-07 62.0 72 44.4
Gorai.007G337200 Gossypium raimondii HOM05D000071 ORTHO05D000029 1.6e-07 62.0 72 44.4
Gorai.007G338100 Gossypium raimondii HOM05D000071 ORTHO05D000029 1.6e-07 62.0 173 48.6
Gorai.007G338400 Gossypium raimondii HOM05D000071 ORTHO05D000029 1.6e-07 62.0 79 45.6
Gorai.007G340200 Gossypium raimondii HOM05D000071 ORTHO05D000029 1.6e-07 62.0 79 44.3
Ciclev10027808m.g Citrus clementina HOM05D000071 ORTHO05D000029 2.1e-07 61.6 81 40.7
Gohir.A11G292500 Gossypium hirsutum HOM05D000071 ORTHO05D000029 2.1e-07 61.6 72 44.4
Gohir.A11G293623 Gossypium hirsutum HOM05D000071 ORTHO05D000029 2.1e-07 61.6 79 44.3
Gorai.007G338300 Gossypium raimondii HOM05D000071 ORTHO05D000029 2.1e-07 61.6 235 32.8
Gorai.007G340000 Gossypium raimondii HOM05D000071 ORTHO05D000029 2.1e-07 61.6 78 42.3
HanXRQChr07g0205491 Helianthus annuus HOM05D000071 ORTHO05D000029 2.1e-07 61.6 77 49.4
HanXRQChr14g0426791 Helianthus annuus HOM05D000071 ORTHO05D000029 2.1e-07 61.6 130 59.2
Lsat_1_v5_gn_2_127221 Lactuca sativa HOM05D000071 ORTHO05D000029 2.1e-07 61.6 77 44.2
GSVIVG01028817001 Vitis vinifera HOM05D000071 ORTHO05D000029 2.1e-07 61.6 80 47.5
Ciclev10029837m.g Citrus clementina HOM05D000071 ORTHO05D000029 2.7e-07 61.2 80 41.2
Gohir.D11G308500 Gossypium hirsutum HOM05D000071 ORTHO05D000029 3.5e-07 60.8 78 42.3
HanXRQChr03g0066231 Helianthus annuus HOM05D000071 ORTHO05D000029 3.5e-07 60.8 75 49.3
HanXRQChr07g0207271 Helianthus annuus HOM05D000071 ORTHO05D000029 4.6e-07 60.5 75 49.3
Dinv07783 Davidia involucrata HOM05D000071 ORTHO05D000029 6.0e-07 60.1 78 43.6
FvH4_7g26565 Fragaria vesca HOM05D000071 ORTHO05D000029 6.0e-07 60.1 84 44.0
FAN06G1668 Fragaria x ananassa HOM05D000071 ORTHO05D000029 6.0e-07 60.1 84 44.0
Lsat_1_v5_gn_8_13781 Lactuca sativa HOM05D000071 ORTHO05D000029 6.0e-07 60.1 78 44.9
QL11p056537 Quercus lobata HOM05D000071 ORTHO05D000029 6.0e-07 60.1 84 38.1
TAR636G2949 Trochodendron aralioides HOM05D000071 ORTHO05D000029 6.0e-07 60.1 72 44.4
vmacro10343 Vaccinium macrocarpon HOM05D000071 ORTHO05D000029 6.0e-07 60.1 91 40.7
Ciclev10029906m.g Citrus clementina HOM05D000071 ORTHO05D000029 1.0e-06 59.3 80 40.0
COL.COLO4_15441 Corchorus olitorius HOM05D000071 ORTHO05D000029 1.0e-06 59.3 77 39.0
Gohir.D11G307800 Gossypium hirsutum HOM05D000071 ORTHO05D000029 1.0e-06 59.3 73 45.2
Duzib106G0774 Durio zibethinus HOM05D000071 ORTHO05D000029 1.3e-06 58.9 81 42.0
Gorai.007G280700 Gossypium raimondii HOM05D000071 ORTHO05D000029 1.3e-06 58.9 240 39.6
Gorai.007G340300 Gossypium raimondii HOM05D000071 ORTHO05D000029 1.3e-06 58.9 78 39.7
HanXRQChr07g0205391 Helianthus annuus HOM05D000071 ORTHO05D225034 1.3e-06 58.9 28 100.0
Prupe.1G575300 Prunus persica HOM05D000071 ORTHO05D000029 1.3e-06 58.9 83 43.4
GSVIVG01024424001 Vitis vinifera HOM05D000071 ORTHO05D000029 1.3e-06 58.9 79 39.2
Gohir.D11G299800 Gossypium hirsutum HOM05D000071 ORTHO05D000029 1.7e-06 58.5 72 43.1
Gorai.007G337300 Gossypium raimondii HOM05D000071 ORTHO05D000029 1.7e-06 58.5 72 41.7
Gorai.007G338700 Gossypium raimondii HOM05D000071 ORTHO05D000029 1.7e-06 58.5 78 41.0
FAN10G4146 Fragaria x ananassa HOM05D000071 ORTHO05D000029 2.3e-06 58.2 80 41.2
Gohir.D11G299700 Gossypium hirsutum HOM05D000071 ORTHO05D000029 2.3e-06 58.2 72 41.7
Gohir.D11G308000 Gossypium hirsutum HOM05D000071 ORTHO05D000029 2.3e-06 58.2 78 41.0
Gorai.011G177700 Gossypium raimondii HOM05D000071 ORTHO05D000029 2.3e-06 58.2 74 39.2
Duzib037G0002 Durio zibethinus HOM05D000071 ORTHO05D000029 3.0e-06 57.8 83 47.0
Duzib106G0040 Durio zibethinus HOM05D000071 ORTHO05D000029 3.0e-06 57.8 83 47.0
Duzib161G0005 Durio zibethinus HOM05D000071 ORTHO05D000029 3.0e-06 57.8 83 47.0
Gohir.D11G308600 Gossypium hirsutum HOM05D000071 ORTHO05D000029 3.0e-06 57.8 78 39.7
Gohir.A08G217200 Gossypium hirsutum HOM05D000071 ORTHO05D000029 3.9e-06 57.4 71 39.4
Gohir.A11G292700 Gossypium hirsutum HOM05D000071 ORTHO05D000029 3.9e-06 57.4 74 44.6
Gohir.A11G293841 Gossypium hirsutum HOM05D000071 ORTHO05D000029 3.9e-06 57.4 79 43.0
Gohir.D11G299900 Gossypium hirsutum HOM05D000071 ORTHO05D000029 3.9e-06 57.4 72 40.3
Dinv34533 Davidia involucrata HOM05D000071 ORTHO05D000029 5.1e-06 57.0 81 42.0
ECA248G0719 Erigeron canadensis HOM05D000071 ORTHO05D000029 5.1e-06 57.0 80 46.2
Gohir.D08G234200 Gossypium hirsutum HOM05D000071 ORTHO05D000029 5.1e-06 57.0 71 39.4
Gorai.004G248900 Gossypium raimondii HOM05D000071 ORTHO05D000029 5.1e-06 57.0 71 39.4
Gorai.007G336000 Gossypium raimondii HOM05D000071 ORTHO05D000029 5.1e-06 57.0 92 39.1
Gorai.007G337100 Gossypium raimondii HOM05D000071 ORTHO05D000029 5.1e-06 57.0 72 38.9
Manes.11G005900 Manihot esculenta HOM05D000071 ORTHO05D000029 5.1e-06 57.0 75 37.3
Prupe.2G270200 Prunus persica HOM05D000071 ORTHO05D000029 5.1e-06 57.0 81 42.0
RcHm_v2.0_Chr1g0373231 Rosa chinensis HOM05D000071 ORTHO05D000029 5.1e-06 57.0 79 39.2
Ciclev10010515m.g Citrus clementina HOM05D000071 ORTHO05D000029 6.6e-06 56.6 76 39.5
Duzib106G0548 Durio zibethinus HOM05D000071 ORTHO05D000029 6.6e-06 56.6 184 48.4
HanXRQChr07g0205231 Helianthus annuus HOM05D000071 ORTHO05D000029 6.6e-06 56.6 44 65.9
HanXRQChr07g0207241 Helianthus annuus HOM05D000071 ORTHO05D000029 6.6e-06 56.6 44 65.9
Hma1.2p1_0142F.1_g064270 Hydrangea macrophylla HOM05D000071 ORTHO05D000029 6.6e-06 56.6 85 41.2
PSO210G4457 Papaver somniferum HOM05D000071 ORTHO05D000029 6.6e-06 56.6 72 41.7
Sc23g0001230 Simmondsia chinensis HOM05D000071 ORTHO05D000029 6.6e-06 56.6 85 40.0
Ciclev10030038m.g Citrus clementina HOM05D000071 ORTHO05D000029 8.6e-06 56.2 78 41.0
Ciclev10030176m.g Citrus clementina HOM05D000071 ORTHO05D000029 8.6e-06 56.2 78 39.7
Dinv32117 Davidia involucrata HOM05D000071 ORTHO05D000029 8.6e-06 56.2 72 43.1
FAN01G0389 Fragaria x ananassa HOM05D000071 ORTHO05D000029 8.6e-06 56.2 79 39.2
Glyma.16G191800 Glycine max HOM05D000071 ORTHO05D000029 8.6e-06 56.2 135 58.5
Lsat_1_v5_gn_8_13680 Lactuca sativa HOM05D000071 ORTHO05D000029 8.6e-06 56.2 78 43.6
Nn4g25059 Nelumbo nucifera HOM05D000071 ORTHO05D000029 8.6e-06 56.2 74 39.2
Rhsim03G0157000 Rhododendron simsii HOM05D000071 ORTHO05D000029 8.6e-06 56.2 78 43.6


User provided reference genes

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