Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0204821 Helianthus annuus HOM05D002371 ORTHO05D002397 1.0e-21 106.3 75 100.0
ECA238G0108 Erigeron canadensis HOM05D002371 ORTHO05D002397 1.2e-17 92.8 53 86.8
Lsat_1_v5_gn_2_126481 Lactuca sativa HOM05D002371 ORTHO05D002397 1.0e-16 89.7 53 84.9
CiPaw.07G131200 Carya illinoinensis HOM05D002371 ORTHO05D002397 6.1e-14 80.5 51 74.5
Duzib114G0087 Durio zibethinus HOM05D002371 ORTHO05D002397 1.0e-13 79.7 48 81.2
Thecc.10G149300 Theobroma cacao HOM05D002371 ORTHO05D002397 1.8e-13 79.0 48 79.2
THA.LOC104813729 Tarenaya hassleriana HOM05D002371 ORTHO05D002397 3.0e-13 78.2 51 72.5
Dinv41635 Davidia involucrata HOM05D002371 ORTHO05D002397 4.0e-13 77.8 51 72.5
Gohir.D10G194300 Gossypium hirsutum HOM05D002371 ORTHO05D002397 5.2e-13 77.4 48 75.0
Gorai.011G217400 Gossypium raimondii HOM05D002371 ORTHO05D002397 5.2e-13 77.4 48 75.0
ATR0605G369 Amborella trichopoda HOM05D002371 ORTHO05D002397 1.2e-12 76.3 51 70.6
Sopen04g036550 Solanum pennellii HOM05D002371 ORTHO05D002397 1.2e-12 76.3 52 69.2
PGSC0003DMG400009928 Solanum tuberosum HOM05D002371 ORTHO05D002397 1.2e-12 76.3 52 69.2
vmacro04430 Vaccinium macrocarpon HOM05D002371 ORTHO05D002397 1.2e-12 76.3 53 73.6
CSS0044188 Camellia sinensis var. sinensis HOM05D002371 ORTHO05D002397 1.5e-12 75.9 52 73.1
COL.COLO4_20703 Corchorus olitorius HOM05D002371 ORTHO05D002397 2.0e-12 75.5 48 75.0
PGR083G1225 Punica granatum HOM05D002371 ORTHO05D002397 2.0e-12 75.5 48 77.1
TWI56G0517 Tripterygium wilfordii HOM05D002371 ORTHO05D002397 2.0e-12 75.5 51 68.6
Potri.002G002700 Populus trichocarpa HOM05D002371 ORTHO05D002397 2.6e-12 75.1 51 70.6
SGA_v2.0_scaffold227G43194 Striga asiatica HOM05D002371 ORTHO05D002397 2.6e-12 75.1 47 76.6
Nn5g31071 Nelumbo nucifera HOM05D002371 ORTHO05D002397 3.4e-12 74.7 50 72.0
Rhsim07G0258100 Rhododendron simsii HOM05D002371 ORTHO05D002397 3.4e-12 74.7 52 73.1
SEGI_20456 Sequoiadendron giganteum HOM05D002371 ORTHO05D002397 3.4e-12 74.7 51 66.7
GSVIVG01013447001 Vitis vinifera HOM05D002371 ORTHO05D002397 3.4e-12 74.7 51 68.6
CAN.G1330.26 Capsicum annuum HOM05D002371 ORTHO05D002397 4.4e-12 74.3 52 69.2
Cfa014156 Carpinus fangiana HOM05D002371 ORTHO05D002397 4.4e-12 74.3 51 68.6
Haze_22878 Corylus avellana HOM05D002371 ORTHO05D002397 4.4e-12 74.3 51 66.7
MD06G1001800 Malus domestica HOM05D002371 ORTHO05D002397 4.4e-12 74.3 52 69.2
Thhalv10019316m.g Eutrema salsugineum HOM05D002371 ORTHO05D002397 5.7e-12 73.9 48 72.9
Gohir.A10G187400 Gossypium hirsutum HOM05D002371 ORTHO05D002397 5.7e-12 73.9 48 72.9
Lsat_1_v5_gn_4_95980 Lactuca sativa HOM05D002371 ORTHO05D002397 5.7e-12 73.9 52 71.2
Manes.05G129800 Manihot esculenta HOM05D002371 ORTHO05D002397 5.7e-12 73.9 50 68.0
Prupe.5G002800 Prunus persica HOM05D002371 ORTHO05D002397 5.7e-12 73.9 52 69.2
Nitab4.5_0009514g0050 Nicotiana tabacum HOM05D002371 ORTHO05D002397 7.5e-12 73.6 52 67.3
Cpa.g.sc36.109 Carica papaya HOM05D002371 ORTHO05D002397 9.7e-12 73.2 51 70.6
QL02p016043 Quercus lobata HOM05D002371 ORTHO05D002397 1.3e-11 72.8 51 70.6
Sabra02G0001800 Salix brachista HOM05D002371 ORTHO05D002397 1.7e-11 72.4 51 68.6
Migut.N02997 Erythranthe guttata HOM05D002371 ORTHO05D002397 2.2e-11 72.0 47 74.5
HanXRQChr09g0276321 Helianthus annuus HOM05D002371 ORTHO05D002397 2.2e-11 72.0 52 69.2
Atru.chr13.31 Acer truncatum HOM05D002371 ORTHO05D002397 2.8e-11 71.6 51 64.7
Aqoxy5G00951 Aquilegia oxysepala HOM05D002371 ORTHO05D002397 2.8e-11 71.6 51 66.7
TAR628G0414 Trochodendron aralioides HOM05D002371 ORTHO05D002397 2.8e-11 71.6 50 66.0
Aa31LG4G6660 Aethionema arabicum HOM05D002371 ORTHO05D002397 3.7e-11 71.2 48 70.8
MBI04_g18017_MAGBIO Magnolia biondii HOM05D002371 ORTHO05D002397 3.7e-11 71.2 50 66.0
MBI04_g40156_MAGBIO Magnolia biondii HOM05D002371 ORTHO05D002397 3.7e-11 71.2 50 66.0
SalBow6G1854 Salvia bowleyana HOM05D002371 ORTHO05D002397 3.7e-11 71.2 49 69.4
Cc10_g00150 Coffea canephora HOM05D002371 ORTHO05D002397 4.8e-11 70.9 48 72.9
ECA232G0578 Erigeron canadensis HOM05D002371 ORTHO05D002397 1.1e-10 69.7 52 65.4
AL2G36700 Arabidopsis lyrata HOM05D002371 ORTHO05D002397 2.4e-10 68.6 48 68.8
A07p42220 Brassica napus HOM05D002371 ORTHO05D002397 3.1e-10 68.2 48 68.8
Lsat_1_v5_gn_2_127641 Lactuca sativa HOM05D002371 ORTHO05D002397 3.1e-10 68.2 46 76.1
AT1G76560 Arabidopsis thaliana HOM05D002371 ORTHO05D002397 4.1e-10 67.8 48 66.7
Carub.0002s2347 Capsella rubella HOM05D002371 ORTHO05D002397 4.1e-10 67.8 48 66.7
DCAR_026374 Daucus carota HOM05D002371 ORTHO05D002397 4.1e-10 67.8 52 65.4
Sp5g31720 Schrenkiella parvula HOM05D002371 ORTHO05D002397 4.1e-10 67.8 47 68.1
CDE05G2421 Ceratophyllum demersum HOM05D002371 ORTHO05D002397 7.0e-10 67.0 51 62.7
Sabra05G0200100 Salix brachista HOM05D002371 ORTHO05D002397 7.0e-10 67.0 50 64.0
CARHR070110 Cardamine hirsuta HOM05D002371 ORTHO05D002397 9.1e-10 66.6 47 68.1
FvH4_5g26470 Fragaria vesca HOM05D002371 ORTHO05D002397 9.1e-10 66.6 53 67.9
FAN08G1439 Fragaria x ananassa HOM05D002371 ORTHO05D002397 9.1e-10 66.6 53 67.9
FAN13G1670 Fragaria x ananassa HOM05D002371 ORTHO05D002397 9.1e-10 66.6 53 67.9
Potri.005G258400 Populus trichocarpa HOM05D002371 ORTHO05D002397 1.2e-09 66.2 50 64.0
RcHm_v2.0_Chr7g0217381 Rosa chinensis HOM05D002371 ORTHO05D002397 1.6e-09 65.9 53 66.0
BraA07t31751Z Brassica rapa HOM05D002371 ORTHO05D002397 2.0e-09 65.5 48 66.7
MBI14_g09006_MAGBIO Magnolia biondii HOM05D000054 ORTHO05D002397 2.0e-09 65.5 50 62.0
C06p50830 Brassica napus HOM05D002371 ORTHO05D002397 2.7e-09 65.1 47 68.1
BolC6t40105H Brassica oleracea HOM05D002371 ORTHO05D002397 2.7e-09 65.1 47 68.1
CANSAT25G2582 Cannabis sativa HOM05D002371 ORTHO05D002397 4.5e-09 64.3 53 64.2
PSO017G1180 Papaver somniferum HOM05D002371 ORTHO05D002397 4.5e-09 64.3 54 59.3
PSO017G5852 Papaver somniferum HOM05D002371 ORTHO05D002397 4.5e-09 64.3 54 59.3
PSO170G1655 Papaver somniferum HOM05D002371 ORTHO05D002397 4.5e-09 64.3 54 59.3
Gohir.A05G282500 Gossypium hirsutum HOM05D002371 ORTHO05D002397 7.7e-09 63.5 56 60.7
Gohir.D05G283700 Gossypium hirsutum HOM05D002371 ORTHO05D002397 7.7e-09 63.5 56 60.7
Gohir.D05G283850 Gossypium hirsutum HOM05D002371 ORTHO05D002397 7.7e-09 63.5 56 60.7
Gorai.009G298200 Gossypium raimondii HOM05D002371 ORTHO05D002397 7.7e-09 63.5 56 60.7
MBI12_g37476_MAGBIO Magnolia biondii HOM05D004660 ORTHO05D005474 7.7e-09 63.5 44 70.5
AUR62035187 Chenopodium quinoa HOM05D002371 ORTHO05D002397 1.0e-08 63.2 48 62.5
AUR62041342 Chenopodium quinoa HOM05D002371 ORTHO05D002397 1.0e-08 63.2 48 62.5
BcaC08g47231 Brassica carinata HOM05D002371 ORTHO05D002397 1.3e-08 62.8 48 64.6
Ciclev10013778m.g Citrus clementina HOM05D002371 ORTHO05D002397 1.7e-08 62.4 48 68.8
MBI12_g14584_MAGBIO Magnolia biondii HOM05D002371 ORTHO05D002397 2.2e-08 62.0 44 68.2
HPP92_018845 Vanilla planifolia HOM05D002371 ORTHO05D002397 7.2e-07 57.0 52 53.8
HPP92_018899 Vanilla planifolia HOM05D002371 ORTHO05D002397 7.2e-07 57.0 52 53.8
Actinidia33601 Actinidia chinensis HOM05D002371 ORTHO05D002397 9.4e-07 56.6 35 77.1
Sabra14G0089500 Salix brachista HOM05D002371 ORTHO05D002397 2.1e-06 55.5 51 45.1
Solyc04g082910.1 Solanum lycopersicum HOM05D002371 ORTHO05D002397 2.1e-06 55.5 37 70.3
COL.COLO4_23231 Corchorus olitorius HOM05D002371 ORTHO05D002397 4.7e-06 54.3 52 44.2
MBI17_g42227_MAGBIO Magnolia biondii HOM05D002371 ORTHO05D002397 6.1e-06 53.9 43 55.8
MBI17_g47233_MAGBIO Magnolia biondii HOM05D002371 ORTHO05D002397 6.1e-06 53.9 43 55.8
Carub.0005s2913 Capsella rubella HOM05D002371 ORTHO05D002397 8.0e-06 53.5 49 46.9
Phvul.001G212900 Phaseolus vulgaris HOM05D002371 ORTHO05D002397 8.0e-06 53.5 53 49.1
TWI36G0150 Tripterygium wilfordii HOM05D002371 ORTHO05D002397 8.0e-06 53.5 45 53.3


User provided reference genes

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