Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0204811 Helianthus annuus HOM05D004331 ORTHO05D004984 1.5e-203 712.6 366 100.0
Lsat_1_v5_gn_2_127600 Lactuca sativa HOM05D004331 ORTHO05D004984 1.1e-148 530.4 368 77.2
Dinv34508 Davidia involucrata HOM05D004331 ORTHO05D004984 2.8e-128 462.6 374 66.0
Nitab4.5_0009756g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 3.5e-123 445.7 373 65.1
CSS0028422 Camellia sinensis var. sinensis HOM05D004331 ORTHO05D004984 5.1e-122 441.8 347 67.7
Hma1.2p1_0264F.1_g105850 Hydrangea macrophylla HOM05D004331 ORTHO05D004984 2.5e-121 439.5 342 67.8
Peaxi162Scf00073g02119 Petunia axillaris HOM05D004331 ORTHO05D004984 9.6e-121 437.6 379 64.1
Actinidia01013 Actinidia chinensis HOM05D004331 ORTHO05D004984 3.6e-120 435.6 341 66.6
DCAR_020157 Daucus carota HOM05D004331 ORTHO05D004984 2.4e-119 433.0 342 68.1
MSTRG.156 Avicennia marina HOM05D004331 ORTHO05D004984 1.5e-118 430.3 373 63.3
Migut.F00564 Erythranthe guttata HOM05D004331 ORTHO05D004984 2.6e-118 429.5 374 64.7
PGSC0003DMG400005253 Solanum tuberosum HOM05D004331 ORTHO05D004984 7.1e-116 421.4 345 66.1
Lj1A969T93 Lonicera japonica HOM05D004331 ORTHO05D004984 1.2e-115 420.6 375 63.5
Sopen03g025450 Solanum pennellii HOM05D004331 ORTHO05D004984 2.1e-115 419.9 345 65.2
TWI73G1241 Tripterygium wilfordii HOM05D004331 ORTHO05D004984 2.7e-115 419.5 388 60.6
Solyc03g095470.3 Solanum lycopersicum HOM05D004331 ORTHO05D004984 3.5e-115 419.1 345 64.9
Manes.10G004100 Manihot esculenta HOM05D004331 ORTHO05D004984 1.8e-114 416.8 393 61.6
C04p02240 Brassica napus HOM05D004331 ORTHO05D004984 5.1e-114 415.2 283 73.9
CAN.G30.2 Capsicum annuum HOM05D004331 ORTHO05D004984 5.6e-113 411.8 344 66.3
SGA_v2.0_scaffold397G50761 Striga asiatica HOM05D004331 ORTHO05D004984 5.6e-113 411.8 372 62.1
Cpa.g.sc19.35 Carica papaya HOM05D004331 ORTHO05D004984 4.8e-112 408.7 282 73.0
TAR636G1774 Trochodendron aralioides HOM05D004331 ORTHO05D004984 2.6e-110 402.9 281 71.5
ClCG11G005520 Citrullus lanatus HOM05D004331 ORTHO05D004984 5.8e-110 401.7 379 59.1
CANSAT56G0386 Cannabis sativa HOM05D004331 ORTHO05D004984 1.0e-109 401.0 371 59.8
vmacro09950 Vaccinium macrocarpon HOM05D004331 ORTHO05D004984 8.4e-109 397.9 376 59.8
Rhsim09G0186700 Rhododendron simsii HOM05D004331 ORTHO05D004984 2.5e-108 396.4 416 57.0
SalBow3G0869 Salvia bowleyana HOM05D004331 ORTHO05D004984 2.5e-108 396.4 345 62.0
Sc11g0006070 Simmondsia chinensis HOM05D004331 ORTHO05D004984 2.5e-108 396.4 329 64.4
Ciclev10031884m.g Citrus clementina HOM05D004331 ORTHO05D004984 3.2e-108 396.0 373 60.1
Thhalv10016808m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 2.7e-107 392.9 356 62.9
Sed0000286 Sechium edule HOM05D004331 ORTHO05D004984 7.9e-107 391.3 352 60.8
AT2G40800 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 1.0e-106 391.0 387 59.2
AL4G38690 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 3.9e-106 389.0 387 58.7
CARHR135900 Cardamine hirsuta HOM05D004331 ORTHO05D004984 3.9e-106 389.0 385 59.5
Sp5g06060 Schrenkiella parvula HOM05D004331 ORTHO05D004984 6.7e-106 388.3 388 58.0
Hund13431 Selenicereus undatus HOM05D004331 ORTHO05D004984 8.7e-106 387.9 280 71.1
Duzib114G0903 Durio zibethinus HOM05D004331 ORTHO05D004984 1.1e-105 387.5 374 57.5
Duzib128G0601 Durio zibethinus HOM05D004331 ORTHO05D004984 1.1e-105 387.5 283 68.6
MD07G1237400 Malus domestica HOM05D004331 ORTHO05D004984 1.5e-105 387.1 345 63.8
Actinidia07780 Actinidia chinensis HOM05D004331 ORTHO05D004984 3.3e-105 386.0 290 69.0
THA.LOC104814366 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 3.3e-105 386.0 364 60.2
BcaC02g12734 Brassica carinata HOM05D004331 ORTHO05D004984 7.4e-105 384.8 293 68.3
Carub.0005s2321 Capsella rubella HOM05D004331 ORTHO05D004984 1.3e-104 384.0 267 71.5
MBI15_g36678_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 1.3e-104 384.0 325 64.3
BolC4t21871H Brassica oleracea HOM05D004331 ORTHO05D004984 2.8e-104 382.9 256 73.8
CsaV3_5G039270 Cucumis sativus L. HOM05D004331 ORTHO05D004984 2.8e-104 382.9 325 63.4
ECA238G1814 Erigeron canadensis HOM05D004331 ORTHO05D004984 2.8e-104 382.9 255 78.4
Thhalv10006036m.g Eutrema salsugineum HOM05D004331 ORTHO05D004984 2.8e-104 382.9 362 59.1
AT3G56430 Arabidopsis thaliana HOM05D004331 ORTHO05D004984 3.7e-104 382.5 291 66.7
MELO3C022105.2 Cucumis melo HOM05D004331 ORTHO05D004984 4.8e-104 382.1 312 65.4
Cfa001189 Carpinus fangiana HOM05D004331 ORTHO05D004984 8.2e-104 381.3 280 70.7
Aa31LG10G11310 Aethionema arabicum HOM05D004331 ORTHO05D004984 1.4e-103 380.6 363 60.1
A05p01900 Brassica napus HOM05D004331 ORTHO05D004984 1.4e-103 380.6 374 58.8
BraA05t19188Z Brassica rapa HOM05D004331 ORTHO05D004984 1.4e-103 380.6 374 58.8
Haze_17376 Corylus avellana HOM05D004331 ORTHO05D004984 1.4e-103 380.6 280 70.4
RcHm_v2.0_Chr1g0372681 Rosa chinensis HOM05D004331 ORTHO05D004984 1.4e-103 380.6 337 62.6
Atru.chr12.214 Acer truncatum HOM05D004331 ORTHO05D004984 3.1e-103 379.4 335 61.5
Sp4g23120 Schrenkiella parvula HOM05D004331 ORTHO05D004984 3.1e-103 379.4 379 58.0
AL5G37760 Arabidopsis lyrata HOM05D004331 ORTHO05D004984 4.1e-103 379.0 266 70.7
MD01G1171000 Malus domestica HOM05D004331 ORTHO05D004984 4.1e-103 379.0 335 62.4
Psat5g069640 Pisum sativum HOM05D004331 ORTHO05D004984 5.3e-103 378.6 313 64.2
Nn5g26801 Nelumbo nucifera HOM05D004331 ORTHO05D004984 6.9e-103 378.3 280 70.4
CARHR166560 Cardamine hirsuta HOM05D004331 ORTHO05D004984 9.0e-103 377.9 333 62.2
Potri.019G062200 Populus trichocarpa HOM05D004331 ORTHO05D004984 9.0e-103 377.9 346 61.0
A09p49380 Brassica napus HOM05D004331 ORTHO05D004984 1.2e-102 377.5 238 78.2
BraA09t40391Z Brassica rapa HOM05D004331 ORTHO05D004984 1.2e-102 377.5 238 78.2
QL08p065166 Quercus lobata HOM05D004331 ORTHO05D004984 2.6e-102 376.3 265 71.7
FAN06G3213 Fragaria x ananassa HOM05D004331 ORTHO05D004984 7.6e-102 374.8 290 66.9
EL10Ac2g02684 Beta vulgaris HOM05D004331 ORTHO05D004984 2.9e-101 372.9 307 63.8
Sabra19G0075700 Salix brachista HOM05D004331 ORTHO05D004984 5.0e-101 372.1 370 58.1
THA.LOC104824369 Tarenaya hassleriana HOM05D004331 ORTHO05D004984 6.5e-101 371.7 330 61.5
AUR62032546 Chenopodium quinoa HOM05D004331 ORTHO05D004984 8.5e-101 371.3 250 72.4
Medtr3g093690 Medicago truncatula HOM05D004331 ORTHO05D004984 8.5e-101 371.3 313 63.6
unitig_88.g27825 Utricularia gibba HOM05D004331 ORTHO05D004984 8.5e-101 371.3 348 59.5
FvH4_7g26230 Fragaria vesca HOM05D004331 ORTHO05D004984 2.5e-100 369.8 250 74.8
SGA_v2.0_scaffold60G20876 Striga asiatica HOM05D004331 ORTHO05D004984 2.5e-100 369.8 362 56.1
FAN10G3590 Fragaria x ananassa HOM05D004331 ORTHO05D004984 3.2e-100 369.4 240 76.2
Sabra19G0081100 Salix brachista HOM05D004331 ORTHO05D004984 3.2e-100 369.4 370 57.8
Thecc.10G186200 Theobroma cacao HOM05D004331 ORTHO05D004984 3.2e-100 369.4 344 59.6
Aqoxy4G03301 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 5.5e-100 368.6 232 78.4
Gohir.D10G184000 Gossypium hirsutum HOM05D004331 ORTHO05D004984 7.2e-100 368.2 326 59.8
Gorai.011G206200 Gossypium raimondii HOM05D004331 ORTHO05D004984 7.2e-100 368.2 326 59.8
BolC8t50795H Brassica oleracea HOM05D004331 ORTHO05D004984 2.1e-99 366.7 215 83.7
arahy.Tifrunner.gnm1.ann1.M9I45E Arachis hypogaea HOM05D004331 ORTHO05D004984 3.6e-99 365.9 286 66.8
arahy.Tifrunner.gnm1.ann1.J1TSCZ Arachis hypogaea HOM05D004331 ORTHO05D004984 6.1e-99 365.2 284 66.9
VMungo1309G0248 Vigna mungo HOM05D004331 ORTHO05D004984 6.1e-99 365.2 311 61.1
Ca_16853_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 1.0e-98 364.4 332 60.2
Ca_29501_v3 Cicer arietinum L. HOM05D004331 ORTHO05D004984 1.0e-98 364.4 332 60.2
COL.COLO4_19485 Corchorus olitorius HOM05D004331 ORTHO05D004984 1.0e-98 364.4 251 72.1
ATR1127G084 Amborella trichopoda HOM05D004331 ORTHO05D004984 2.3e-98 363.2 270 70.7
Glyma.06G141000 Glycine max HOM05D004331 ORTHO05D004984 6.7e-98 361.7 284 65.5
Eucgr.L02349 Eucalyptus grandis HOM05D004331 ORTHO05D004984 3.3e-97 359.4 272 67.3
TPR.G13966 Trifolium pratense HOM05D004331 ORTHO05D004984 3.3e-97 359.4 269 68.0
Gohir.A10G177400 Gossypium hirsutum HOM05D004331 ORTHO05D004984 4.3e-97 359.0 283 64.7
Os01g0168300 Oryza sativa ssp. japonica HOM05D004331 ORTHO05D004984 5.7e-97 358.6 259 69.9
Phvul.009G042200 Phaseolus vulgaris HOM05D004331 ORTHO05D004984 7.4e-97 358.2 310 60.3
SEGI_36006 Sequoiadendron giganteum HOM05D004331 ORTHO05D004984 9.7e-97 357.8 363 55.4
PGR142G0580 Punica granatum HOM05D004331 ORTHO05D004984 1.6e-96 357.1 360 57.2
Lalb_Chr11g0067651 Lupinus albus HOM05D004331 ORTHO05D004984 8.2e-96 354.8 361 56.2
Glyma.04G223900 Glycine max HOM05D004331 ORTHO05D004984 2.4e-95 353.2 233 73.0
Eucgr.G03152 Eucalyptus grandis HOM05D004331 ORTHO05D004984 6.9e-95 351.7 272 66.5
HPP92_012570 Vanilla planifolia HOM05D004331 ORTHO05D004984 6.9e-95 351.7 284 63.4
Lalb_Chr08g0239281 Lupinus albus HOM05D004331 ORTHO05D004984 1.7e-93 347.1 265 68.3
Dinv21866 Davidia involucrata HOM05D004331 ORTHO05D004984 2.2e-93 346.7 201 85.6
PSO017G4126 Papaver somniferum HOM05D004331 ORTHO05D004984 4.6e-91 339.0 361 55.1
PSO170G2208 Papaver somniferum HOM05D004331 ORTHO05D004984 1.4e-90 337.4 285 62.5
Lj1g0025811 Lotus japonicus HOM05D004331 ORTHO05D004984 1.8e-90 337.0 305 57.7
Actinidia13632 Actinidia chinensis HOM05D004331 ORTHO05D004984 5.1e-90 335.5 241 73.0
Pp3c7_18440 Physcomitrium patens HOM05D004331 ORTHO05D004984 6.3e-88 328.6 259 63.3
BcaC07g39957 Brassica carinata HOM05D004331 ORTHO05D004984 2.4e-87 326.6 238 70.6
AagrBONN_evm.TU.Sc2ySwM_340.90 Anthoceros agrestis HOM05D004331 ORTHO05D004984 2.5e-84 316.6 276 60.1
Cc02_g05110 Coffea canephora HOM05D004331 ORTHO05D004984 3.6e-83 312.8 179 87.2
Mapoly0158s0020 Marchantia polymorpha HOM05D004331 ORTHO05D004984 3.6e-83 312.8 257 61.5
Nitab4.5_0018056g0010 Nicotiana tabacum HOM05D004331 ORTHO05D004984 1.0e-82 311.2 286 61.2
Pp3c1_5190 Physcomitrium patens HOM05D004331 ORTHO05D004984 8.8e-82 308.1 259 60.6
GSVIVG01032862001 Vitis vinifera HOM05D004331 ORTHO05D004984 3.3e-81 306.2 176 85.8
FAN01G2544 Fragaria x ananassa HOM05D004331 ORTHO05D004984 2.0e-78 297.0 181 82.9
C08p31740 Brassica napus HOM05D004331 ORTHO05D004984 2.5e-76 290.0 238 66.4
SMO199G0115 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 7.2e-76 288.5 234 62.4
CBR_g29882 Chara braunii HOM05D004331 ORTHO05D004984 9.4e-76 288.1 296 52.4
SMO361G0183 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 1.2e-75 287.7 233 62.2
Oeu039397.2 Olea europaea HOM05D004331 ORTHO05D004984 2.7e-70 270.0 196 72.4
CiPaw.02G199300 Carya illinoinensis HOM05D004331 ORTHO05D004984 1.1e-68 264.6 276 55.4
AUR62030578 Chenopodium quinoa HOM05D004331 ORTHO05D004984 3.7e-64 249.6 155 78.7
CiPaw.01G307700 Carya illinoinensis HOM05D004331 ORTHO05D004984 2.4e-63 246.9 162 75.9
Zm00001eb336450 Zea mays HOM05D004331 ORTHO05D004984 1.9e-60 237.3 153 76.5
Ah.10g029610 Amaranthus hybridus HOM05D000033 ORTHO05D000913 8.8e-58 228.4 154 74.0
Manes.03G048500 Manihot esculenta HOM05D004331 ORTHO05D004984 5.7e-57 225.7 393 42.0
MSTRG.8387 Avicennia marina HOM05D004331 ORTHO05D004984 3.3e-52 209.9 376 41.2
BcaC02g11378 Brassica carinata HOM05D004331 ORTHO05D004984 1.5e-49 201.1 134 75.4
C04p16400 Brassica napus HOM05D004331 ORTHO05D004984 1.5e-49 201.1 134 75.4
BcaC04g21857 Brassica carinata HOM05D004331 ORTHO05D004984 3.4e-49 199.9 134 74.6
BcaC09g50949 Brassica carinata HOM05D004331 ORTHO05D004984 4.4e-49 199.5 134 75.4
SMO361G0787 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 9.8e-49 198.4 226 44.2
C09p26570 Brassica napus HOM05D004331 ORTHO05D004984 1.7e-48 197.6 134 74.6
BolC9t55553H Brassica oleracea HOM05D004331 ORTHO05D004984 1.7e-48 197.6 134 74.6
SMO361G0173 Selaginella moellendorffii HOM05D004331 ORTHO05D004984 2.9e-48 196.8 226 43.8
Carub.0004s2310 Capsella rubella HOM05D004331 ORTHO05D004984 4.9e-48 196.1 358 40.8
Prupe.2G266500 Prunus persica HOM05D004331 ORTHO05D004984 6.2e-43 179.1 348 38.8
Cre05.g232752 Chlamydomonas reinhardtii HOM05D004331 ORTHO05D004984 2.9e-40 170.2 265 37.4
BcaC09g50388 Brassica carinata HOM05D004331 ORTHO05D004984 8.3e-40 168.7 134 65.7
PRCOL_00001688 Prasinoderma coloniale HOM05D004331 ORTHO05D004984 2.4e-39 167.2 238 38.7
BolC1t02551H Brassica oleracea HOM05D004331 ORTHO05D004984 4.1e-39 166.4 134 64.9
C01p26060 Brassica napus HOM05D004331 ORTHO05D004984 4.6e-38 162.9 134 64.2
Actinidia31642 Actinidia chinensis HOM05D004331 ORTHO05D004984 7.8e-38 162.2 165 58.2
C01p18940 Brassica napus HOM05D004331 ORTHO05D004984 3.9e-37 159.8 102 76.5
BolC1t01820H Brassica oleracea HOM05D004331 ORTHO05D004984 3.9e-37 159.8 102 76.5
C03p81590 Brassica napus HOM05D004331 ORTHO05D004984 1.9e-36 157.5 106 76.4
BolC3t20429H Brassica oleracea HOM05D004331 ORTHO05D004984 1.9e-36 157.5 106 76.4
BcaC01g00580 Brassica carinata HOM05D003032 ORTHO05D003456 8.1e-35 152.1 106 73.6
SHI31864 Sapria himalayana HOM05D004331 ORTHO05D004984 2.6e-33 147.1 91 76.9
HPP92_012539 Vanilla planifolia HOM05D004331 ORTHO05D004984 2.1e-30 137.5 143 56.6
MBI15_g10655_MAGBIO Magnolia biondii HOM05D004331 ORTHO05D004984 1.7e-29 134.4 196 46.4
Ah.10g029620 Amaranthus hybridus HOM05D004331 ORTHO05D004984 5.1e-29 132.9 91 68.1
AUR62030577 Chenopodium quinoa HOM05D004331 ORTHO05D004984 1.9e-28 131.0 166 47.6
BcaC04g23398 Brassica carinata HOM05D004331 ORTHO05D004984 1.6e-27 127.9 134 56.0
CiPaw.01G307900 Carya illinoinensis HOM05D004331 ORTHO05D004984 2.3e-26 124.0 107 62.6
Zm00001eb123190 Zea mays HOM05D004331 ORTHO05D004984 4.9e-24 116.3 115 53.0
Eucgr.G03162 Eucalyptus grandis HOM05D004331 ORTHO05D004984 1.1e-23 115.2 215 40.5
SHI31865 Sapria himalayana HOM05D004331 ORTHO05D004984 1.0e-21 108.6 95 55.8
VMungo0540G1227 Vigna mungo HOM05D004331 ORTHO05D004984 1.1e-20 105.1 83 65.1
SHI31863 Sapria himalayana HOM05D004331 ORTHO05D004984 1.6e-19 101.3 87 58.6
Aqoxy4G02083 Aquilegia oxysepala HOM05D004331 ORTHO05D004984 1.1e-18 98.6 63 74.6
BolC9t53789H Brassica oleracea HOM05D004331 ORTHO05D004984 5.2e-18 96.3 87 63.2
MCO04G099 Micromonas commoda HOM05D004331 ORTHO05D004984 3.2e-15 87.0 214 28.5
C08p13890 Brassica napus HOM05D013285 ORTHO05D004984 2.7e-14 84.0 48 83.3
BraA04t18575Z Brassica rapa HOM05D004331 ORTHO05D016805 2.5e-12 77.4 44 84.1
BolC4t28360H Brassica oleracea HOM05D004331 ORTHO05D004984 2.1e-11 74.3 68 57.4


User provided reference genes

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