Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0204191 Helianthus annuus HOM05D007555 ORTHO05D009521 3.4e-97 358.2 170 100.0
ECA238G3221 Erigeron canadensis HOM05D000025 ORTHO05D000040 5.2e-61 238.0 142 72.5
Lsat_1_v5_gn_2_111420 Lactuca sativa HOM05D007555 ORTHO05D009521 6.3e-59 231.1 142 78.2
Hma1.2p1_0111F.1_g053420 Hydrangea macrophylla HOM05D007555 ORTHO05D009521 7.7e-57 224.2 158 63.3
Dinv37229 Davidia involucrata HOM05D007555 ORTHO05D009521 1.0e-56 223.8 171 62.6
Migut.L01641 Erythranthe guttata HOM05D007555 ORTHO05D009521 1.0e-56 223.8 160 63.1
DCAR_017749 Daucus carota HOM05D007555 ORTHO05D009521 1.5e-55 219.9 144 66.7
Nitab4.5_0000643g0170 Nicotiana tabacum HOM05D007555 ORTHO05D009521 1.9e-55 219.5 154 61.7
Eucgr.A01211 Eucalyptus grandis HOM05D007555 ORTHO05D009521 2.5e-55 219.2 151 65.6
Nitab4.5_0006252g0040 Nicotiana tabacum HOM05D007555 ORTHO05D009521 5.6e-55 218.0 174 56.9
MSTRG.26743 Avicennia marina HOM05D007555 ORTHO05D009521 7.3e-55 217.6 169 58.6
Cc06_g03250 Coffea canephora HOM05D007555 ORTHO05D009521 9.5e-55 217.2 183 60.1
Nn2g12825 Nelumbo nucifera HOM05D000419 ORTHO05D000692 1.2e-54 216.9 146 65.1
Glyma.13G134800 Glycine max HOM05D007555 ORTHO05D009521 4.7e-54 214.9 169 59.8
SGA_v2.0_scaffold94G28647 Striga asiatica HOM05D007555 ORTHO05D009521 8.0e-54 214.2 167 57.5
GSVIVG01025579001 Vitis vinifera HOM05D007555 ORTHO05D009521 1.0e-53 213.8 125 70.4
Hund06478 Selenicereus undatus HOM05D007555 ORTHO05D009521 2.3e-53 212.6 158 62.0
Solyc09g006000.3 Solanum lycopersicum HOM05D007555 ORTHO05D009521 2.3e-53 212.6 176 58.0
CAN.G350.37 Capsicum annuum HOM05D007555 ORTHO05D009521 3.0e-53 212.2 127 70.9
ClCG04G008630 Citrullus lanatus HOM05D007555 ORTHO05D009521 5.2e-53 211.5 165 60.6
CsaV3_4G024530 Cucumis sativus L. HOM05D007555 ORTHO05D009521 6.8e-53 211.1 157 59.9
Thecc.05G049100 Theobroma cacao HOM05D007555 ORTHO05D009521 8.9e-53 210.7 144 64.6
VMungo0720G3150 Vigna mungo HOM05D007555 ORTHO05D009521 2.6e-52 209.1 168 57.7
AUR62030924 Chenopodium quinoa HOM05D007555 ORTHO05D009521 4.4e-52 208.4 147 65.3
Phvul.007G161000 Phaseolus vulgaris HOM05D007555 ORTHO05D009521 4.4e-52 208.4 168 59.5
Potri.006G215300 Populus trichocarpa HOM05D007555 ORTHO05D009521 7.5e-52 207.6 151 60.9
PSO339G2355 Papaver somniferum HOM05D007555 ORTHO05D009521 9.8e-52 207.2 138 65.2
TWI53G2115 Tripterygium wilfordii HOM05D007555 ORTHO05D009521 9.8e-52 207.2 141 64.5
Actinidia05288 Actinidia chinensis HOM05D007555 ORTHO05D009521 1.3e-51 206.8 170 54.7
PSO384G0825 Papaver somniferum HOM05D007555 ORTHO05D009521 1.7e-51 206.5 138 64.5
Sed0003448 Sechium edule HOM05D007555 ORTHO05D009521 2.2e-51 206.1 154 60.4
Gorai.002G252400 Gossypium raimondii HOM05D007555 ORTHO05D009521 2.9e-51 205.7 138 64.5
QL07p045973 Quercus lobata HOM05D007555 ORTHO05D009521 3.7e-51 205.3 140 62.1
Atru.chr8.2503 Acer truncatum HOM05D007555 ORTHO05D009521 4.9e-51 204.9 130 67.7
Gohir.D01G207300 Gossypium hirsutum HOM05D007555 ORTHO05D009521 4.9e-51 204.9 138 64.5
Sabra06G0166200 Salix brachista HOM05D007555 ORTHO05D009521 1.4e-50 203.4 152 62.5
Gohir.A01G218500 Gossypium hirsutum HOM05D007555 ORTHO05D009521 1.8e-50 203.0 138 63.8
MD12G1131600 Malus domestica HOM05D007555 ORTHO05D009521 1.8e-50 203.0 165 57.6
Ah.01g007300 Amaranthus hybridus HOM05D007555 ORTHO05D009521 2.4e-50 202.6 160 58.1
ATR0693G428 Amborella trichopoda HOM05D007555 ORTHO05D009521 2.4e-50 202.6 141 61.7
Aqoxy2G01932 Aquilegia oxysepala HOM05D007555 ORTHO05D009521 4.1e-50 201.8 125 69.6
FAN09G3476 Fragaria x ananassa HOM05D007555 ORTHO05D009521 7.0e-50 201.1 146 63.7
Medtr1g067330 Medicago truncatula HOM05D007555 ORTHO05D009521 9.2e-50 200.7 163 55.2
MELO3C003085.2 Cucumis melo HOM05D007555 ORTHO05D009521 1.2e-49 200.3 165 58.8
EL10Ac9g22121 Beta vulgaris HOM05D007555 ORTHO05D009521 1.6e-49 199.9 170 56.5
BcaC06g32006 Brassica carinata HOM05D007555 ORTHO05D009521 1.6e-49 199.9 170 54.1
A10p33000 Brassica napus HOM05D007555 ORTHO05D009521 2.0e-49 199.5 172 55.2
vmacro08680 Vaccinium macrocarpon HOM05D007555 ORTHO05D009521 2.0e-49 199.5 159 60.4
Prupe.6G246000 Prunus persica HOM05D007555 ORTHO05D009521 2.7e-49 199.1 163 56.4
Ciclev10012844m.g Citrus clementina HOM05D007555 ORTHO05D009521 3.5e-49 198.7 155 58.7
BraA10t45337Z Brassica rapa HOM05D007555 ORTHO05D009521 5.9e-49 198.0 166 53.6
Haze_20696 Corylus avellana HOM05D007555 ORTHO05D009521 5.9e-49 198.0 156 56.4
Cpa.g.sc114.21 Carica papaya HOM05D007555 ORTHO05D009521 7.8e-49 197.6 155 56.1
FvH4_6g14780 Fragaria vesca HOM05D007555 ORTHO05D009521 1.0e-48 197.2 144 63.2
FAN05G0792 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.0e-48 197.2 144 63.2
FAN14G0454 Fragaria x ananassa HOM05D007555 ORTHO05D009521 1.0e-48 197.2 144 63.2
PGR004G0254 Punica granatum HOM05D007555 ORTHO05D009521 2.3e-48 196.1 172 52.3
RcHm_v2.0_Chr3g0468011 Rosa chinensis HOM05D007555 ORTHO05D009521 3.0e-48 195.7 164 57.3
C09p73970 Brassica napus HOM05D007555 ORTHO05D009521 3.9e-48 195.3 172 54.1
Psat6g069400 Pisum sativum HOM05D007555 ORTHO05D009521 3.9e-48 195.3 158 57.0
BolC9t60132H Brassica oleracea HOM05D007555 ORTHO05D009521 8.6e-48 194.1 173 53.2
CARHR210660 Cardamine hirsuta HOM05D007555 ORTHO05D009521 8.6e-48 194.1 159 54.7
BcaNung03281 Brassica carinata HOM05D007555 ORTHO05D009521 1.1e-47 193.7 173 53.2
Lj5g0027152 Lotus japonicus HOM05D007555 ORTHO05D009521 1.1e-47 193.7 169 52.7
Carub.0006s0147 Capsella rubella HOM05D007555 ORTHO05D009521 1.5e-47 193.4 171 50.9
AL6G11950 Arabidopsis lyrata HOM05D007555 ORTHO05D009521 1.9e-47 193.0 158 55.1
Thhalv10014815m.g Eutrema salsugineum HOM05D007555 ORTHO05D009521 4.3e-47 191.8 166 53.6
Manes.08G000300 Manihot esculenta HOM05D007555 ORTHO05D009521 5.6e-47 191.4 137 62.8
arahy.Tifrunner.gnm1.ann1.UIJ5I4 Arachis hypogaea HOM05D007555 ORTHO05D009521 1.2e-46 190.3 163 54.6
Aa31LG1G22170 Aethionema arabicum HOM05D007555 ORTHO05D009521 1.6e-46 189.9 169 53.3
CDE05G2937 Ceratophyllum demersum HOM05D007555 ORTHO05D009521 2.1e-46 189.5 143 56.6
TPR.G7549 Trifolium pratense HOM05D007555 ORTHO05D009521 2.1e-46 189.5 115 67.8
AT5G02710 Arabidopsis thaliana HOM05D007555 ORTHO05D009521 6.2e-46 188.0 172 53.5
arahy.Tifrunner.gnm1.ann1.ASDQ9T Arachis hypogaea HOM05D007555 ORTHO05D009521 8.0e-46 187.6 162 54.3
THA.LOC104816299 Tarenaya hassleriana HOM05D007555 ORTHO05D009521 1.0e-45 187.2 165 53.3
unitig_0.g697 Utricularia gibba HOM05D000139 ORTHO05D009521 2.3e-45 186.0 154 57.1
CiPaw.09G185700 Carya illinoinensis HOM05D007555 ORTHO05D009521 4.4e-44 181.8 145 55.2
Cfa017464 Carpinus fangiana HOM05D007555 ORTHO05D009521 5.8e-44 181.4 138 58.7
Zm00001eb017700 Zea mays HOM05D007555 ORTHO05D009521 9.8e-44 180.6 120 60.8
Os03g0363400 Oryza sativa ssp. japonica HOM05D007555 ORTHO05D009521 4.9e-43 178.3 122 62.3
Lj2P231T24 Lonicera japonica HOM05D007555 ORTHO05D009521 2.4e-42 176.0 107 66.4
SEGI_01945 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 1.6e-41 173.3 130 61.5
Sc08g0004110 Simmondsia chinensis HOM05D007555 ORTHO05D009521 2.7e-41 172.6 104 70.2
PGSC0003DMG400023920 Solanum tuberosum HOM05D007555 ORTHO05D009521 5.6e-39 164.9 177 50.8
Medtr0016s0020 Medicago truncatula HOM05D007555 ORTHO05D009521 4.7e-38 161.8 141 52.5
Sp6g39860 Schrenkiella parvula HOM05D007555 ORTHO05D009521 2.3e-37 159.5 131 53.4
C02p41790 Brassica napus HOM05D007555 ORTHO05D009521 3.1e-37 159.1 152 49.3
Pp3c1_22520 Physcomitrium patens HOM05D007555 ORTHO05D009521 2.6e-36 156.0 115 53.9
BcaC03g16355 Brassica carinata HOM05D007555 ORTHO05D009521 9.8e-36 154.1 152 48.0
BolC1t02552H Brassica oleracea HOM05D007555 ORTHO05D009521 1.1e-34 150.6 163 45.4
BcaC09g50387 Brassica carinata HOM05D007555 ORTHO05D009521 7.1e-34 147.9 138 50.0
Peaxi162Scf00597g00516 Petunia axillaris HOM05D007555 ORTHO05D009521 7.1e-34 147.9 164 46.3
C01p26070 Brassica napus HOM05D007555 ORTHO05D009521 1.0e-32 144.1 163 44.2
Lalb_Chr02g0153411 Lupinus albus HOM05D007555 ORTHO05D009521 3.9e-32 142.1 85 70.6
TAR636G0687 Trochodendron aralioides HOM05D007555 ORTHO05D009521 1.2e-28 130.6 94 63.8
FAN02G2228 Fragaria x ananassa HOM05D007555 ORTHO05D009521 7.6e-28 127.9 82 65.9
Lj2A103T67 Lonicera japonica HOM05D007555 ORTHO05D009521 3.3e-15 85.9 127 35.4
SEGI_05937 Sequoiadendron giganteum HOM05D007555 ORTHO05D009521 3.6e-14 82.4 56 66.1
COL.COLO4_10316 Corchorus olitorius HOM05D007555 ORTHO05D009521 1.8e-13 80.1 75 52.0
CSS0046800 Camellia sinensis var. sinensis HOM05D007555 ORTHO05D009521 6.9e-13 78.2 87 47.1
Lalb_Chr02g0153401 Lupinus albus HOM05D007555 ORTHO05D009521 3.8e-11 72.4 57 61.4


User provided reference genes

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