Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0204121 Helianthus annuus HOM05D003589 ORTHO05D005170 8.8e-140 500.4 266 100.0
Lsat_1_v5_gn_2_126280 Lactuca sativa HOM05D003589 ORTHO05D005170 5.1e-55 218.8 251 54.2
ECA238G2532 Erigeron canadensis HOM05D003589 ORTHO05D005170 8.7e-55 218.0 257 52.9
Dinv34487 Davidia involucrata HOM05D003589 ORTHO05D005170 3.8e-26 122.9 291 38.5
Hma1.2p1_0264F.1_g106130 Hydrangea macrophylla HOM05D003589 ORTHO05D005170 2.5e-25 120.2 208 41.8
Lj8A54T74 Lonicera japonica HOM05D003589 ORTHO05D005170 2.3e-23 113.6 248 37.9
Actinidia31628 Actinidia chinensis HOM05D003589 ORTHO05D005170 2.6e-22 110.2 202 39.1
vmacro06893 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 7.7e-19 98.6 201 39.8
Nitab4.5_0002279g0060 Nicotiana tabacum HOM05D003589 ORTHO05D005170 5.0e-18 95.9 196 40.8
PGR142G3587 Punica granatum HOM05D003589 ORTHO05D005170 5.0e-18 95.9 201 33.3
ClCG11G005660 Citrullus lanatus HOM05D003589 ORTHO05D005170 6.5e-18 95.5 189 34.4
CSS0030619 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 1.4e-17 94.4 203 38.9
TAR633G1241 Trochodendron aralioides HOM05D003589 ORTHO05D005170 1.4e-17 94.4 229 37.6
Nitab4.5_0000375g0230 Nicotiana tabacum HOM05D003589 ORTHO05D005170 2.5e-17 93.6 237 34.6
GSVIVG01032671001 Vitis vinifera HOM05D003589 ORTHO05D005170 2.5e-17 93.6 193 37.3
Solyc05g052210.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 3.2e-17 93.2 167 38.3
Peaxi162Scf00167g01218 Petunia axillaris HOM05D003589 ORTHO05D005170 9.4e-17 91.7 217 37.8
Ciclev10032400m.g Citrus clementina HOM05D003589 ORTHO05D005170 2.1e-16 90.5 267 31.1
Gohir.A10G150900 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.1e-16 90.5 231 34.2
Rhsim03G0152700 Rhododendron simsii HOM05D003589 ORTHO05D005170 3.6e-16 89.7 161 41.0
PGSC0003DMG400011643 Solanum tuberosum HOM05D003589 ORTHO05D005170 4.7e-16 89.4 217 37.8
Sopen05g030750 Solanum pennellii HOM05D003589 ORTHO05D005170 1.0e-15 88.2 217 37.3
Cc02_g05350 Coffea canephora HOM05D003589 ORTHO05D005170 1.8e-15 87.4 230 33.0
Migut.F01242 Erythranthe guttata HOM05D003589 ORTHO05D005170 1.8e-15 87.4 280 28.6
MELO3C020009.2 Cucumis melo HOM05D003589 ORTHO05D005170 2.3e-15 87.0 189 31.7
CsaV3_6G002320 Cucumis sativus L. HOM05D003589 ORTHO05D005170 2.3e-15 87.0 205 30.7
Prupe.6G293800 Prunus persica HOM05D003589 ORTHO05D005170 2.3e-15 87.0 174 37.4
Cpa.g.sc19.55 Carica papaya HOM05D003589 ORTHO05D005170 3.0e-15 86.7 193 36.8
Dinv25345 Davidia involucrata HOM05D003589 ORTHO05D005170 5.2e-15 85.9 228 33.8
Gohir.D10G115400 Gossypium hirsutum HOM05D003589 ORTHO05D005170 5.2e-15 85.9 231 32.9
Gorai.011G127100 Gossypium raimondii HOM05D003589 ORTHO05D005170 6.7e-15 85.5 231 32.9
Potri.019G058400 Populus trichocarpa HOM05D003589 ORTHO05D005170 6.7e-15 85.5 243 31.7
TAR369G0333 Trochodendron aralioides HOM05D003589 ORTHO05D005170 6.7e-15 85.5 218 37.2
DCAR_014664 Daucus carota HOM05D003589 ORTHO05D005170 2.0e-14 84.0 170 37.1
Sed0000653 Sechium edule HOM05D003589 ORTHO05D005170 2.6e-14 83.6 189 34.4
Eucgr.G03139 Eucalyptus grandis HOM05D003589 ORTHO05D005170 3.3e-14 83.2 242 32.2
Rhsim03G0152300 Rhododendron simsii HOM05D003589 ORTHO05D005170 3.3e-14 83.2 161 40.4
Duzib114G0452 Durio zibethinus HOM05D003589 ORTHO05D005170 8.2e-13 78.6 237 31.2
Actinidia20793 Actinidia chinensis HOM05D003589 ORTHO05D005170 1.4e-12 77.8 236 31.4
Atru.chr8.113 Acer truncatum HOM05D003589 ORTHO05D005170 2.4e-12 77.0 197 35.5
Thecc.10G179400 Theobroma cacao HOM05D003589 ORTHO05D005170 4.1e-12 76.3 152 34.9
Manes.10G001600 Manihot esculenta HOM05D003589 ORTHO05D005170 7.0e-12 75.5 281 28.1
MD04G1174800 Malus domestica HOM05D003589 ORTHO05D005170 9.1e-12 75.1 177 34.5
Thecc.04G151400 Theobroma cacao HOM05D003589 ORTHO05D005170 1.6e-11 74.3 231 33.3
Peaxi162Scf00732g00259 Petunia axillaris HOM05D003589 ORTHO05D005170 3.5e-11 73.2 196 35.2
A03p48340 Brassica napus HOM05D003589 ORTHO05D005170 4.5e-11 72.8 176 33.5
DCAR_018039 Daucus carota HOM05D003589 ORTHO05D005170 4.5e-11 72.8 247 34.0
Nitab4.5_0004433g0040 Nicotiana tabacum HOM05D003589 ORTHO05D005170 5.9e-11 72.4 196 33.7
MSTRG.169 Avicennia marina HOM05D003589 ORTHO05D005170 7.7e-11 72.0 186 35.5
Oeu006056.1 Olea europaea HOM05D003589 ORTHO05D005170 7.7e-11 72.0 153 38.6
C07p46370 Brassica napus HOM05D003589 ORTHO05D005170 1.0e-10 71.6 176 34.7
CiPaw.09G221500 Carya illinoinensis HOM05D003589 ORTHO05D005170 1.3e-10 71.2 160 37.5
Nn5g26845 Nelumbo nucifera HOM05D003589 ORTHO05D005170 1.3e-10 71.2 207 36.2
BcaC06g33027 Brassica carinata HOM05D003589 ORTHO05D005170 1.7e-10 70.9 178 33.1
Gohir.A02G003200 Gossypium hirsutum HOM05D003589 ORTHO05D005170 2.2e-10 70.5 232 31.5
vmacro08941 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 2.2e-10 70.5 198 34.8
SGA_v2.0_scaffold85G26610 Striga asiatica HOM05D003589 ORTHO05D005170 2.9e-10 70.1 166 32.5
Ciclev10011425m.g Citrus clementina HOM05D003589 ORTHO05D005170 3.8e-10 69.7 233 30.9
Gohir.D02G003600 Gossypium hirsutum HOM05D003589 ORTHO05D005170 8.5e-10 68.6 231 30.3
Gorai.005G004100 Gossypium raimondii HOM05D003589 ORTHO05D005170 8.5e-10 68.6 231 30.3
Oeu044185.1 Olea europaea HOM05D003589 ORTHO05D005170 8.5e-10 68.6 107 45.8
BolC7t45155H Brassica oleracea HOM05D003589 ORTHO05D005170 1.1e-09 68.2 188 32.4
CANSAT56G1879 Cannabis sativa HOM05D003589 ORTHO05D005170 1.5e-09 67.8 267 32.6
Duzib151G0965 Durio zibethinus HOM05D003589 ORTHO05D005170 1.5e-09 67.8 174 31.0
Solyc09g015530.3 Solanum lycopersicum HOM05D003589 ORTHO05D005170 1.5e-09 67.8 197 33.5
BraA03t13942Z Brassica rapa HOM05D003589 ORTHO05D005170 2.5e-09 67.0 198 30.8
Sopen09g009460 Solanum pennellii HOM05D003589 ORTHO05D005170 2.5e-09 67.0 197 33.5
PGSC0003DMG400026790 Solanum tuberosum HOM05D003589 ORTHO05D005170 2.5e-09 67.0 197 33.5
Thhalv10010441m.g Eutrema salsugineum HOM05D003589 ORTHO05D005170 3.2e-09 66.6 178 30.9
Sc20g0006980 Simmondsia chinensis HOM05D003589 ORTHO05D005170 3.2e-09 66.6 218 30.3
Sp5g10690 Schrenkiella parvula HOM05D003589 ORTHO05D005170 5.5e-09 65.9 178 31.5
COL.COLO4_06483 Corchorus olitorius HOM05D003589 ORTHO05D005170 7.2e-09 65.5 192 33.3
AT3G51580 Arabidopsis thaliana HOM05D003589 ORTHO05D005170 9.4e-09 65.1 177 31.6
FAN09G1607 Fragaria x ananassa HOM05D003589 ORTHO05D005170 9.4e-09 65.1 229 31.9
Lalb_Chr01g0023761 Lupinus albus HOM05D003589 ORTHO05D005170 9.4e-09 65.1 171 31.0
Carub.0005s1794 Capsella rubella HOM05D003589 ORTHO05D005170 1.6e-08 64.3 178 30.9
Manes.09G118000 Manihot esculenta HOM05D003589 ORTHO05D005170 1.6e-08 64.3 230 30.9
Nitab4.5_0000048g0030 Nicotiana tabacum HOM05D003589 ORTHO05D005170 1.6e-08 64.3 196 32.7
SalBow5G5138 Salvia bowleyana HOM05D003589 ORTHO05D005170 2.1e-08 63.9 238 28.6
Rhsim04G0121600 Rhododendron simsii HOM05D003589 ORTHO05D005170 2.7e-08 63.5 169 35.5
AL5G32020 Arabidopsis lyrata HOM05D003589 ORTHO05D005170 3.6e-08 63.2 178 30.3
Glyma.09G274700 Glycine max HOM05D003589 ORTHO05D005170 3.6e-08 63.2 170 27.6
Hund03699 Selenicereus undatus HOM05D003589 ORTHO05D005170 3.6e-08 63.2 195 32.8
FAN14G2282 Fragaria x ananassa HOM05D003589 ORTHO05D005170 4.7e-08 62.8 229 31.0
MBI15_g01602_MAGBIO Magnolia biondii HOM05D003589 ORTHO05D005170 4.7e-08 62.8 197 29.9
Haze_21177 Corylus avellana HOM05D003589 ORTHO05D005170 6.1e-08 62.4 141 34.8
Glyma.18G213700 Glycine max HOM05D003589 ORTHO05D005170 6.1e-08 62.4 141 31.2
Potri.016G136900 Populus trichocarpa HOM05D003589 ORTHO05D005170 6.1e-08 62.4 245 26.9
CARHR161170 Cardamine hirsuta HOM05D003589 ORTHO05D005170 8.0e-08 62.0 178 27.5
FAN02G1320 Fragaria x ananassa HOM05D003589 ORTHO05D005170 8.0e-08 62.0 180 36.1
QL07p032102 Quercus lobata HOM05D003589 ORTHO05D005170 8.0e-08 62.0 216 32.4
FvH4_6g09850 Fragaria vesca HOM05D003589 ORTHO05D005170 1.0e-07 61.6 229 31.0
PSO170G6362 Papaver somniferum HOM05D003589 ORTHO05D005170 1.8e-07 60.8 243 29.6
PGR031G3776 Punica granatum HOM05D003589 ORTHO05D005170 1.8e-07 60.8 175 29.1
CSS0028706 Camellia sinensis var. sinensis HOM05D003589 ORTHO05D005170 4.0e-07 59.7 161 36.0
Sabra19G0073800 Salix brachista HOM05D003589 ORTHO05D005170 6.7e-07 58.9 229 29.3
ClCG10G022760 Citrullus lanatus HOM05D003589 ORTHO05D005170 8.8e-07 58.5 188 33.0
Cpa.g.sc86.55 Carica papaya HOM05D003589 ORTHO05D005170 1.5e-06 57.8 162 34.6
RcHm_v2.0_Chr3g0460451 Rosa chinensis HOM05D003589 ORTHO05D005170 3.3e-06 56.6 228 30.7
FAN05G0190 Fragaria x ananassa HOM05D003589 ORTHO05D005170 4.4e-06 56.2 229 30.1
FAN05G1200 Fragaria x ananassa HOM05D003589 ORTHO05D005170 4.4e-06 56.2 229 30.1
FAN05G4521 Fragaria x ananassa HOM05D003589 ORTHO05D005170 4.4e-06 56.2 229 30.1
Psat3g118720 Pisum sativum HOM05D003589 ORTHO05D005170 4.4e-06 56.2 234 27.8
TPR.G14123 Trifolium pratense HOM05D003589 ORTHO05D005170 4.4e-06 56.2 183 29.0
Ah.15g090010 Amaranthus hybridus HOM05D003589 ORTHO05D005170 5.7e-06 55.8 230 27.8
TWI74G0182 Tripterygium wilfordii HOM05D003589 ORTHO05D005170 5.7e-06 55.8 183 28.4


User provided reference genes

Program Settings