Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0202221 Helianthus annuus HOM05D000880 ORTHO05D009684 3.2e-283 978.4 775 100.0
Lsat_1_v5_gn_5_33201 Lactuca sativa HOM05D000880 ORTHO05D009684 4.8e-53 213.8 201 58.2
ECA232G0576 Erigeron canadensis HOM05D000880 ORTHO05D009684 4.1e-36 157.5 145 57.2
Actinidia06447 Actinidia chinensis HOM05D000880 ORTHO05D009684 1.3e-34 152.5 184 48.4
Lj4A910T18 Lonicera japonica HOM05D000880 ORTHO05D009684 1.4e-31 142.5 185 47.6
Dinv15656 Davidia involucrata HOM05D000880 ORTHO05D009684 2.2e-29 135.2 184 45.7
vmacro08195 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 1.4e-28 132.5 182 44.0
ECA236G3570 Erigeron canadensis HOM05D000705 ORTHO05D002970 9.1e-28 129.8 125 56.0
Rhsim04G0217100 Rhododendron simsii HOM05D000880 ORTHO05D009684 1.2e-27 129.4 181 39.8
Lj6C69T3 Lonicera japonica HOM05D000880 ORTHO05D009684 2.6e-27 128.3 180 45.6
Atru.chr7.2671 Acer truncatum HOM05D000880 ORTHO05D009684 3.0e-23 114.8 152 43.4
QL12p024656 Quercus lobata HOM05D000880 ORTHO05D009684 2.6e-22 111.7 148 45.3
AUR62017906 Chenopodium quinoa HOM05D000880 ORTHO05D009684 4.8e-21 107.5 141 40.4
AUR62003593 Chenopodium quinoa HOM05D000880 ORTHO05D009684 1.4e-20 105.9 140 40.0
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 1.8e-20 105.5 127 46.5
vmacro08192 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 3.1e-20 104.8 182 35.2
CSS0007644 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 7.0e-20 103.6 124 46.8
MD08G1133900 Malus domestica HOM05D000880 ORTHO05D009684 1.6e-19 102.4 143 42.0
Prupe.1G462500 Prunus persica HOM05D000880 ORTHO05D009684 2.0e-19 102.1 128 43.8
Lalb_Chr03g0032741 Lupinus albus HOM05D000880 ORTHO05D009684 3.5e-19 101.3 126 44.4
Oeu040613.1 Olea europaea HOM05D000880 ORTHO05D009684 4.5e-19 100.9 187 41.7
TAR626G1204 Trochodendron aralioides HOM05D000880 ORTHO05D009684 2.9e-18 98.2 184 34.2
Glyma.13G197400 Glycine max HOM05D000880 ORTHO05D009684 6.5e-18 97.1 97 49.5
CiPaw.07G214800 Carya illinoinensis HOM05D000880 ORTHO05D009684 1.5e-17 95.9 175 37.7
RcHm_v2.0_Chr6g0312241 Rosa chinensis HOM05D000880 ORTHO05D009684 1.5e-17 95.9 164 40.2
Haze_21694 Corylus avellana HOM05D000880 ORTHO05D009684 2.5e-17 95.1 119 45.4
Cc08_g06370 Coffea canephora HOM05D000880 ORTHO05D009684 7.2e-17 93.6 187 39.0
FAN24G3119 Fragaria x ananassa HOM05D000880 ORTHO05D009684 1.2e-16 92.8 172 36.6
Lj3g0007027 Lotus japonicus HOM05D000880 ORTHO05D009684 2.1e-16 92.0 133 41.4
Manes.07G088100 Manihot esculenta HOM05D000880 ORTHO05D009684 2.7e-16 91.7 133 42.1
Nitab4.5_0000502g0180 Nicotiana tabacum HOM05D000880 ORTHO05D009684 4.7e-16 90.9 185 35.7
Cpa.g.sc10.206 Carica papaya HOM05D000880 ORTHO05D009684 6.1e-16 90.5 160 40.6
Ca_12883_v3 Cicer arietinum L. HOM05D000880 ORTHO05D009684 8.0e-16 90.1 134 40.3
FAN20G2124 Fragaria x ananassa HOM05D000880 ORTHO05D009684 1.0e-15 89.7 164 37.2
Medtr1g010020 Medicago truncatula HOM05D000880 ORTHO05D009684 1.8e-15 89.0 152 39.5
FvH4_2g30660 Fragaria vesca HOM05D000880 ORTHO05D009684 2.3e-15 88.6 126 41.3
Aa31LG10G9610 Aethionema arabicum HOM05D000880 ORTHO05D009684 3.0e-15 88.2 145 40.0
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 3.0e-15 88.2 114 45.6
CANSAT78G1387 Cannabis sativa HOM05D000880 ORTHO05D009684 3.0e-15 88.2 159 37.7
PGSC0003DMG400005692 Solanum tuberosum HOM05D000880 ORTHO05D009684 4.0e-15 87.8 199 35.7
Sopen03g038940 Solanum pennellii HOM05D000880 ORTHO05D009684 6.7e-15 87.0 184 35.9
Nn8g39798 Nelumbo nucifera HOM05D000880 ORTHO05D009684 8.8e-15 86.7 171 33.9
PGR044G0315 Punica granatum HOM05D000880 ORTHO05D009684 8.8e-15 86.7 131 41.2
Solyc03g120070.4 Solanum lycopersicum HOM05D000880 ORTHO05D009684 8.8e-15 86.7 184 35.9
SGA_v2.0_scaffold121G33022 Striga asiatica HOM05D000880 ORTHO05D009684 8.8e-15 86.7 212 31.6
arahy.Tifrunner.gnm1.ann1.CHY0RW Arachis hypogaea HOM05D000880 ORTHO05D009684 1.5e-14 85.9 114 45.6
PSO017G1147 Papaver somniferum HOM05D000880 ORTHO05D001950 1.5e-14 85.9 210 31.0
Ciclev10007859m.g Citrus clementina HOM05D000880 ORTHO05D009684 2.0e-14 85.5 127 37.8
Thecc.09G004700 Theobroma cacao HOM05D000880 ORTHO05D009684 2.0e-14 85.5 121 43.0
TPR.G12115 Trifolium pratense HOM05D000880 ORTHO05D009684 7.5e-14 83.6 96 47.9
FAN27G3148 Fragaria x ananassa HOM05D000880 ORTHO05D009684 9.7e-14 83.2 100 45.0
Potri.018G004400 Populus trichocarpa HOM05D000880 ORTHO05D009684 2.2e-13 82.0 154 37.0
VMungo1127G1257 Vigna mungo HOM05D000880 ORTHO05D009684 2.2e-13 82.0 95 46.3
MELO3C011202.2 Cucumis melo HOM05D000880 ORTHO05D009684 2.8e-13 81.6 131 36.6
Eucgr.H00073 Eucalyptus grandis HOM05D000880 ORTHO05D009684 2.8e-13 81.6 99 46.5
Migut.E01433 Erythranthe guttata HOM05D000880 ORTHO05D009684 1.1e-12 79.7 184 33.7
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 2.4e-12 78.6 131 35.1
Phvul.011G207000 Phaseolus vulgaris HOM05D000880 ORTHO05D009684 3.1e-12 78.2 94 45.7
A06p35600 Brassica napus HOM05D000880 ORTHO05D009684 4.1e-12 77.8 128 38.3
Hund04480 Selenicereus undatus HOM05D000880 ORTHO05D009684 9.1e-12 76.6 115 40.0
CARHR188620 Cardamine hirsuta HOM05D000880 ORTHO05D009684 1.6e-11 75.9 92 47.8
Glyma.15G236000 Glycine max HOM05D000880 ORTHO05D009684 4.5e-11 74.3 66 48.5
CsaV3_2G031530 Cucumis sativus L. HOM05D000880 ORTHO05D009684 5.9e-11 73.9 115 38.3
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 5.9e-11 73.9 201 29.4
Sed0004667 Sechium edule HOM05D000880 ORTHO05D009684 5.9e-11 73.9 129 37.2
Aa31LG10G9680 Aethionema arabicum HOM05D000880 ORTHO05D009684 7.7e-11 73.6 99 45.5
Psat6g031840 Pisum sativum HOM05D000880 ORTHO05D009684 7.7e-11 73.6 96 45.8
Sc07g0001710 Simmondsia chinensis HOM05D000880 ORTHO05D009684 1.0e-10 73.2 117 39.3
Thhalv10003880m.g Eutrema salsugineum HOM05D000880 ORTHO05D009684 2.2e-10 72.0 98 42.9
Peaxi162Scf00288g01016 Petunia axillaris HOM05D000880 ORTHO05D009684 2.9e-10 71.6 186 31.7
Sabra18G0001200 Salix brachista HOM05D000880 ORTHO05D009684 2.9e-10 71.6 140 36.4
Sabra18G0010100 Salix brachista HOM05D000880 ORTHO05D009684 2.9e-10 71.6 140 36.4
Sp2g22620 Schrenkiella parvula HOM05D000880 ORTHO05D009684 3.8e-10 71.2 151 33.8
C07p42940 Brassica napus HOM05D000880 ORTHO05D009684 8.5e-10 70.1 90 46.7
BolC7t44823H Brassica oleracea HOM05D000880 ORTHO05D009684 8.5e-10 70.1 90 46.7
CSS0003109 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 1.1e-09 69.7 105 40.0
BraA06t26485Z Brassica rapa HOM05D000880 ORTHO05D009684 1.9e-09 68.9 91 45.1
Nitab4.5_0001956g0020 Nicotiana tabacum HOM05D000880 ORTHO05D009684 3.2e-09 68.2 180 31.1
MBI13_g01685_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D001950 4.2e-09 67.8 193 27.5
EL10Ac6g15284 Beta vulgaris HOM05D000880 ORTHO05D009684 7.2e-09 67.0 118 37.3
Aqoxy5G01876 Aquilegia oxysepala HOM05D000880 ORTHO05D009684 1.8e-07 62.4 180 28.3
Carub.0006s2268 Capsella rubella HOM05D000880 ORTHO05D009684 1.8e-07 62.4 96 41.7
HPP92_017364 Vanilla planifolia HOM05D003382 ORTHO05D003930 2.3e-07 62.0 151 27.8
AT5G24830 Arabidopsis thaliana HOM05D000880 ORTHO05D009684 5.2e-07 60.8 96 39.6
MSTRG.13951 Avicennia marina HOM05D000880 ORTHO05D009684 8.8e-07 60.1 76 46.1
GSVIVG01003996001 Vitis vinifera HOM05D000880 ORTHO05D009684 1.5e-06 59.3 70 52.9
AL6G36470 Arabidopsis lyrata HOM05D000880 ORTHO05D009684 2.0e-06 58.9 88 40.9
CiPaw.15G081300 Carya illinoinensis HOM05D000880 ORTHO05D009684 4.4e-06 57.8 85 41.2
DCAR_017077 Daucus carota HOM05D000880 ORTHO05D009684 5.7e-06 57.4 39 56.4


User provided reference genes

Program Settings