Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0202001 Helianthus annuus HOM05D001128 ORTHO05D000721 2.5e-154 548.9 314 100.0
Lsat_1_v5_gn_2_116981 Lactuca sativa HOM05D001128 ORTHO05D000721 2.1e-52 210.3 368 42.7
HanXRQChr14g0458491 Helianthus annuus HOM05D001128 ORTHO05D000721 7.1e-48 195.3 358 43.3
ECA238G0704 Erigeron canadensis HOM05D001128 ORTHO05D000721 2.2e-28 130.6 367 36.0
Lsat_1_v5_gn_8_14501 Lactuca sativa HOM05D001128 ORTHO05D000721 6.3e-28 129.0 327 33.9
Prupe.2G243200 Prunus persica HOM05D001128 ORTHO05D000721 2.6e-18 97.1 402 29.9
Glyma.18G031800 Glycine max HOM05D001128 ORTHO05D000721 3.2e-16 90.1 151 40.4
Duzib114G0703 Durio zibethinus HOM05D001128 ORTHO05D000721 2.1e-15 87.4 160 37.5
Duzib128G2050 Durio zibethinus HOM05D001128 ORTHO05D000721 3.6e-15 86.7 159 37.1
Sabra10G0150300 Salix brachista HOM05D001128 ORTHO05D000721 6.1e-15 85.9 161 40.4
vmacro07011 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 7.9e-15 85.5 319 30.7
Gohir.D10G238700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.3e-14 84.0 267 29.6
Dinv34448 Davidia involucrata HOM05D001128 ORTHO05D000721 5.2e-14 82.8 308 28.2
Gorai.011G274600 Gossypium raimondii HOM05D001128 ORTHO05D000721 8.8e-14 82.0 273 28.9
Duzib106G0526 Durio zibethinus HOM05D001128 ORTHO05D000721 1.1e-13 81.6 166 33.7
Potri.010G195800 Populus trichocarpa HOM05D001128 ORTHO05D000721 1.5e-13 81.3 161 39.1
Gohir.A10G226400 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.6e-13 80.5 273 28.9
Gorai.012G073700 Gossypium raimondii HOM05D001128 ORTHO05D000721 3.3e-13 80.1 245 31.0
Lj3C959G13 Lonicera japonica HOM05D001128 ORTHO05D000721 3.3e-13 80.1 303 29.4
COL.COLO4_25581 Corchorus olitorius HOM05D001128 ORTHO05D000721 1.7e-12 77.8 300 30.0
Gohir.D04G065500 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.2e-12 77.4 245 30.6
Gohir.A05G346700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 4.8e-12 76.3 245 30.2
Phvul.001G238700 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 4.8e-12 76.3 262 28.6
Lj1A945T19 Lonicera japonica HOM05D001128 ORTHO05D000721 8.2e-12 75.5 170 37.6
Manes.07G123000 Manihot esculenta HOM05D001128 ORTHO05D000721 8.2e-12 75.5 167 40.7
Manes.10G020800 Manihot esculenta HOM05D001128 ORTHO05D000721 8.2e-12 75.5 160 36.9
Prupe.6G265300 Prunus persica HOM05D001128 ORTHO05D000721 8.2e-12 75.5 163 36.2
QL08p062120 Quercus lobata HOM05D001128 ORTHO05D000721 8.2e-12 75.5 164 37.8
LjContig00141g0001836 Lotus japonicus HOM05D001128 ORTHO05D000721 1.1e-11 75.1 155 36.1
Cpa.g.sc19.247 Carica papaya HOM05D001128 ORTHO05D000721 1.4e-11 74.7 162 34.6
CSS0047983 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 1.8e-11 74.3 297 28.6
Cfa001394 Carpinus fangiana HOM05D001128 ORTHO05D000721 2.4e-11 73.9 163 37.4
Dinv16282 Davidia involucrata HOM05D001128 ORTHO05D000721 3.1e-11 73.6 165 37.6
FAN10G3504 Fragaria x ananassa HOM05D001128 ORTHO05D000721 3.1e-11 73.6 398 28.9
Lalb_Chr18g0052901 Lupinus albus HOM05D001128 ORTHO05D000721 3.1e-11 73.6 257 29.2
RcHm_v2.0_Chr1g0368901 Rosa chinensis HOM05D001128 ORTHO05D000721 4.1e-11 73.2 420 28.1
PGR044G0160 Punica granatum HOM05D001128 ORTHO05D000721 5.3e-11 72.8 165 37.6
Actinidia13898 Actinidia chinensis HOM05D001128 ORTHO05D000721 7.0e-11 72.4 153 41.8
Glyma.11G225400 Glycine max HOM05D001128 ORTHO05D000721 7.0e-11 72.4 391 26.9
HanXRQChr12g0369451 Helianthus annuus HOM05D001128 ORTHO05D000721 7.0e-11 72.4 327 28.1
Rhsim03G0138400 Rhododendron simsii HOM05D001128 ORTHO05D000721 7.0e-11 72.4 313 29.4
Nn2g13535 Nelumbo nucifera HOM05D001128 ORTHO05D000721 9.1e-11 72.0 162 37.0
Thecc.10G030500 Theobroma cacao HOM05D001128 ORTHO05D000721 9.1e-11 72.0 163 35.0
CSS0013156 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 1.2e-10 71.6 164 36.6
Nitab4.5_0002822g0050 Nicotiana tabacum HOM05D001128 ORTHO05D000721 1.2e-10 71.6 385 26.8
CSS0030928 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 1.6e-10 71.2 164 36.6
TAR623G0478 Trochodendron aralioides HOM05D001128 ORTHO05D000721 2.0e-10 70.9 161 37.3
Actinidia29161 Actinidia chinensis HOM05D001128 ORTHO05D000721 2.6e-10 70.5 162 33.3
ClCG07G003770 Citrullus lanatus HOM05D001128 ORTHO05D000721 3.5e-10 70.1 267 27.3
AUR62022804 Chenopodium quinoa HOM05D001128 ORTHO05D000721 4.5e-10 69.7 299 27.8
Potri.008G062200 Populus trichocarpa HOM05D001128 ORTHO05D000721 5.9e-10 69.3 159 39.0
VMungo1383G1773 Vigna mungo HOM05D001128 ORTHO05D000721 5.9e-10 69.3 166 36.1
Actinidia02898 Actinidia chinensis HOM05D001128 ORTHO05D000721 7.7e-10 68.9 169 34.9
vmacro20201 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 7.7e-10 68.9 328 26.5
GSVIVG01016431001 Vitis vinifera HOM05D001128 ORTHO05D000721 7.7e-10 68.9 161 34.8
DCAR_028803 Daucus carota HOM05D001128 ORTHO05D000721 1.0e-09 68.6 157 35.0
FvH4_7g23630 Fragaria vesca HOM05D001128 ORTHO05D000721 1.0e-09 68.6 277 31.4
Haze_17155 Corylus avellana HOM05D001128 ORTHO05D000721 1.3e-09 68.2 161 36.0
Duzib093G0147 Durio zibethinus HOM05D001128 ORTHO05D000721 1.3e-09 68.2 161 37.9
Glyma.07G141000 Glycine max HOM05D001128 ORTHO05D000721 1.3e-09 68.2 168 34.5
Hma1.2p1_0039F.1_g024950 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 1.3e-09 68.2 126 42.1
GSVIVG01034054001 Vitis vinifera HOM05D001128 ORTHO05D000721 1.3e-09 68.2 166 34.9
CiPaw.09G202700 Carya illinoinensis HOM05D001128 ORTHO05D000721 1.7e-09 67.8 164 34.8
Glyma.18G191000 Glycine max HOM05D001128 ORTHO05D000721 2.2e-09 67.4 161 34.2
Duzib128G0075 Durio zibethinus HOM05D001128 ORTHO05D000721 2.9e-09 67.0 169 35.5
Gohir.D09G157200 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.9e-09 67.0 161 36.6
Medtr5g081460 Medicago truncatula HOM05D001128 ORTHO05D000721 2.9e-09 67.0 157 35.0
Actinidia13814 Actinidia chinensis HOM05D001128 ORTHO05D000721 3.8e-09 66.6 162 35.8
Cpa.g.sc56.66 Carica papaya HOM05D001128 ORTHO05D000721 3.8e-09 66.6 161 36.0
MD01G1142200 Malus domestica HOM05D001128 ORTHO05D000721 3.8e-09 66.6 322 28.6
Thecc.05G027900 Theobroma cacao HOM05D001128 ORTHO05D000721 3.8e-09 66.6 161 36.6
Dinv37107 Davidia involucrata HOM05D001128 ORTHO05D000721 5.0e-09 66.2 161 36.6
FAN01G1897 Fragaria x ananassa HOM05D001128 ORTHO05D000721 5.0e-09 66.2 277 31.0
FAN03G2145 Fragaria x ananassa HOM05D001128 ORTHO05D000721 8.5e-09 65.5 274 29.6
Sabra06G0070700 Salix brachista HOM05D001128 ORTHO05D000721 8.5e-09 65.5 162 33.3
TAR636G2726 Trochodendron aralioides HOM05D001128 ORTHO05D000721 8.5e-09 65.5 163 35.0
Zm00001eb367680 Zea mays HOM05D001128 ORTHO05D000721 8.5e-09 65.5 155 34.8
CANSAT56G3374 Cannabis sativa HOM05D001128 ORTHO05D000721 1.1e-08 65.1 165 36.4
MD07G1207900 Malus domestica HOM05D001128 ORTHO05D000721 1.1e-08 65.1 246 28.9
Peaxi162Scf00009g03319 Petunia axillaris HOM05D001128 ORTHO05D000721 1.1e-08 65.1 162 34.6
Gorai.006G178800 Gossypium raimondii HOM05D001128 ORTHO05D000721 1.5e-08 64.7 161 36.0
Lj6g0007644 Lotus japonicus HOM05D001128 ORTHO05D000721 1.5e-08 64.7 161 36.0
Ciclev10011799m.g Citrus clementina HOM05D001128 ORTHO05D000721 1.9e-08 64.3 159 35.2
Gohir.D04G126000 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.9e-08 64.3 160 34.4
Hma1.2p1_0671F.1_g200660 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 1.9e-08 64.3 164 35.4
Nitab4.5_0000243g0040 Nicotiana tabacum HOM05D001128 ORTHO05D000721 1.9e-08 64.3 171 30.4
Phvul.008G113400 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 1.9e-08 64.3 166 35.5
Ciclev10031729m.g Citrus clementina HOM05D001128 ORTHO05D000721 2.5e-08 63.9 154 33.8
COL.COLO4_14683 Corchorus olitorius HOM05D001128 ORTHO05D000721 2.5e-08 63.9 308 30.5
Gohir.A11G328200 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.5e-08 63.9 155 34.8
Gorai.012G109000 Gossypium raimondii HOM05D001128 ORTHO05D000721 3.2e-08 63.5 160 34.4
TWI53G0706 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 3.2e-08 63.5 161 34.8
Nitab4.5_0000652g0060 Nicotiana tabacum HOM05D001128 ORTHO05D000721 4.2e-08 63.2 160 33.1
Sabra08G0045800 Salix brachista HOM05D001128 ORTHO05D000721 4.2e-08 63.2 158 38.6
Duzib106G0325 Durio zibethinus HOM05D001128 ORTHO05D000721 5.5e-08 62.8 102 42.2
Rhsim05G0200600 Rhododendron simsii HOM05D001128 ORTHO05D000721 1.2e-07 61.6 164 33.5
arahy.Tifrunner.gnm1.ann1.EVQB8B Arachis hypogaea HOM05D001128 ORTHO05D000721 1.6e-07 61.2 135 34.8
Hma1.2p1_0026F.1_g016650 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 1.6e-07 61.2 120 40.0
TWI74G1371 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 1.6e-07 61.2 372 24.5
Gohir.A04G086100 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.1e-07 60.8 160 33.8
Manes.09G099100 Manihot esculenta HOM05D001128 ORTHO05D000721 2.1e-07 60.8 154 35.1
Nitab4.5_0002823g0030 Nicotiana tabacum HOM05D001128 ORTHO05D000721 2.7e-07 60.5 151 33.1
arahy.Tifrunner.gnm1.ann1.RKI1B6 Arachis hypogaea HOM05D001128 ORTHO05D000721 3.6e-07 60.1 135 34.8
AUR62012167 Chenopodium quinoa HOM05D001128 ORTHO05D000721 3.6e-07 60.1 222 29.3
FAN06G2816 Fragaria x ananassa HOM05D001128 ORTHO05D000721 3.6e-07 60.1 195 31.3
FAN06G3577 Fragaria x ananassa HOM05D001128 ORTHO05D000721 3.6e-07 60.1 195 31.3
Gohir.A09G161600 Gossypium hirsutum HOM05D001128 ORTHO05D000721 3.6e-07 60.1 164 33.5
Phvul.008G228300 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 3.6e-07 60.1 283 26.9
RcHm_v2.0_Chr3g0464501 Rosa chinensis HOM05D001128 ORTHO05D000721 3.6e-07 60.1 171 36.3
MELO3C009213.2 Cucumis melo HOM05D001128 ORTHO05D000721 6.1e-07 59.3 154 37.7
MELO3C026566.2 Cucumis melo HOM05D001128 ORTHO05D000721 6.1e-07 59.3 265 26.8
MBI14_g02856_MAGBIO Magnolia biondii HOM05D001128 ORTHO05D000721 6.1e-07 59.3 172 34.3
Psat2g036720 Pisum sativum HOM05D001128 ORTHO05D000721 6.1e-07 59.3 122 37.7
Sed0015993 Sechium edule HOM05D001128 ORTHO05D000721 6.1e-07 59.3 249 28.5
TPR.G11407 Trifolium pratense HOM05D001128 ORTHO05D000721 6.1e-07 59.3 132 37.9
TWI77G0372 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 6.1e-07 59.3 156 34.0
Glyma.14G063900 Glycine max HOM05D001128 ORTHO05D000721 8.0e-07 58.9 154 35.1
Ah.10g036830 Amaranthus hybridus HOM05D001128 ORTHO05D000721 1.0e-06 58.5 273 28.6
CiPaw.02G188400 Carya illinoinensis HOM05D001128 ORTHO05D000721 1.0e-06 58.5 161 31.1
Glyma.02G252700 Glycine max HOM05D001128 ORTHO05D000721 1.0e-06 58.5 155 34.8
HanXRQChr08g0221301 Helianthus annuus HOM05D001128 ORTHO05D000721 1.0e-06 58.5 241 26.6
TWI09G0818 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 1.0e-06 58.5 162 33.3
MELO3C003199.2 Cucumis melo HOM05D001128 ORTHO05D000721 1.4e-06 58.2 168 33.9
CsaV3_3G034430 Cucumis sativus L. HOM05D001128 ORTHO05D000721 1.4e-06 58.2 154 37.0
CsaV3_4G025740 Cucumis sativus L. HOM05D001128 ORTHO05D000721 1.4e-06 58.2 167 31.7
Gorai.007G377500 Gossypium raimondii HOM05D001128 ORTHO05D000721 1.4e-06 58.2 161 32.9
PSO339G4622 Papaver somniferum HOM05D001128 ORTHO05D000721 1.4e-06 58.2 163 31.9
PSO384G2375 Papaver somniferum HOM05D001128 ORTHO05D000721 1.4e-06 58.2 163 31.9
Atru.chr8.2106 Acer truncatum HOM05D001128 ORTHO05D000721 1.8e-06 57.8 164 32.9
EL10Ac2g04665 Beta vulgaris HOM05D001128 ORTHO05D000721 1.8e-06 57.8 175 33.7
CsaV3_5G008580 Cucumis sativus L. HOM05D001128 ORTHO05D000721 1.8e-06 57.8 265 26.8
Lsat_1_v5_gn_9_31700 Lactuca sativa HOM05D001128 ORTHO05D000721 1.8e-06 57.8 274 30.3
Cc02_g07190 Coffea canephora HOM05D001128 ORTHO05D000721 2.3e-06 57.4 302 28.1
Eucgr.J00969 Eucalyptus grandis HOM05D001128 ORTHO05D000721 2.3e-06 57.4 159 33.3
Potri.016G105000 Populus trichocarpa HOM05D001128 ORTHO05D000721 4.0e-06 56.6 171 33.3
MSTRG.27358 Avicennia marina HOM05D001128 ORTHO05D000721 5.2e-06 56.2 302 28.5
Haze_20899 Corylus avellana HOM05D001128 ORTHO05D000721 5.2e-06 56.2 166 33.7
Gohir.D11G347100 Gossypium hirsutum HOM05D001128 ORTHO05D000721 5.2e-06 56.2 101 40.6
MBI05_g02674_MAGBIO Magnolia biondii HOM05D001128 ORTHO05D000721 5.2e-06 56.2 155 35.5
MD12G1155400 Malus domestica HOM05D001128 ORTHO05D000721 5.2e-06 56.2 156 31.4
Sopen09g006510 Solanum pennellii HOM05D001128 ORTHO05D000721 5.2e-06 56.2 165 35.2
Zm00001eb147910 Zea mays HOM05D001128 ORTHO05D000721 5.2e-06 56.2 121 36.4
FAN05G2922 Fragaria x ananassa HOM05D001128 ORTHO05D000721 6.7e-06 55.8 175 34.9
CANSAT35G1304 Cannabis sativa HOM05D001128 ORTHO05D000721 8.8e-06 55.5 155 31.0
Solyc09g011690.4 Solanum lycopersicum HOM05D001128 ORTHO05D000721 8.8e-06 55.5 174 33.3
PGSC0003DMG400011730 Solanum tuberosum HOM05D001128 ORTHO05D000721 8.8e-06 55.5 165 35.2
TAR633G0212 Trochodendron aralioides HOM05D001128 ORTHO05D000721 8.8e-06 55.5 276 28.6


User provided reference genes

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