Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0201211 Helianthus annuus HOM05D004383 ORTHO05D005050 1.3e-117 426.4 209 100.0
ECA238G1890 Erigeron canadensis HOM05D004383 ORTHO05D005050 1.0e-87 327.0 180 88.9
Lsat_1_v5_gn_8_16540 Lactuca sativa HOM05D004383 ORTHO05D005050 3.7e-85 318.5 174 89.7
Duzib168G1681 Durio zibethinus HOM05D004383 ORTHO05D005050 4.5e-83 311.6 179 85.5
Lj7A737G42 Lonicera japonica HOM05D004383 ORTHO05D005050 5.9e-83 311.2 180 83.9
PGR044G2662 Punica granatum HOM05D004383 ORTHO05D005050 1.3e-82 310.1 181 85.1
ECA233G1452 Erigeron canadensis HOM05D004383 ORTHO05D005050 2.9e-82 308.9 173 87.9
Gohir.D06G105600 Gossypium hirsutum HOM05D004383 ORTHO05D005050 3.8e-82 308.5 179 84.4
Gorai.009G064600 Gossypium raimondii HOM05D004383 ORTHO05D005050 5.0e-82 308.1 179 83.8
Gorai.010G120200 Gossypium raimondii HOM05D004383 ORTHO05D005050 6.6e-82 307.8 179 84.4
HanXRQChr12g0370101 Helianthus annuus HOM05D004383 ORTHO05D005050 6.6e-82 307.8 173 88.4
Medtr1g013660 Medicago truncatula HOM05D004383 ORTHO05D005050 1.5e-81 306.6 174 83.9
CSS0047262 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 1.9e-81 306.2 179 83.8
Gohir.A05G061400 Gossypium hirsutum HOM05D004383 ORTHO05D005050 1.9e-81 306.2 179 83.2
TPR.G38877 Trifolium pratense HOM05D004383 ORTHO05D005050 1.9e-81 306.2 174 84.5
CSS0026414 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 2.5e-81 305.8 180 82.2
Manes.03G007300 Manihot esculenta HOM05D004383 ORTHO05D005050 3.3e-81 305.4 181 82.3
Atru.chr7.2584 Acer truncatum HOM05D004383 ORTHO05D005050 4.2e-81 305.1 181 83.4
GSVIVG01035992001 Vitis vinifera HOM05D004383 ORTHO05D005050 5.5e-81 304.7 178 83.1
Cc00_g24580 Coffea canephora HOM05D004383 ORTHO05D005050 7.2e-81 304.3 181 82.9
Gohir.D05G063900 Gossypium hirsutum HOM05D004383 ORTHO05D005050 7.2e-81 304.3 179 82.7
Manes.16G131700 Manihot esculenta HOM05D004383 ORTHO05D005050 7.2e-81 304.3 181 81.8
Eucgr.C04036 Eucalyptus grandis HOM05D004383 ORTHO05D005050 9.5e-81 303.9 181 82.9
Phvul.001G042400 Phaseolus vulgaris HOM05D004383 ORTHO05D005050 9.5e-81 303.9 177 82.5
Thecc.09G012700 Theobroma cacao HOM05D004383 ORTHO05D005050 1.6e-80 303.1 175 84.6
Hma1.2p1_0355F.1_g133920 Hydrangea macrophylla HOM05D004383 ORTHO05D005050 2.1e-80 302.8 180 82.2
Psat6g025120 Pisum sativum HOM05D004383 ORTHO05D005050 2.8e-80 302.4 174 83.9
COL.COLO4_18979 Corchorus olitorius HOM05D002641 ORTHO05D005050 3.6e-80 302.0 179 82.1
Duzib187G0841 Durio zibethinus HOM05D004383 ORTHO05D005050 3.6e-80 302.0 179 82.1
MD15G1042900 Malus domestica HOM05D004383 ORTHO05D005050 4.7e-80 301.6 181 81.2
Glyma.17G222100 Glycine max HOM05D004383 ORTHO05D005050 6.1e-80 301.2 177 81.4
CsaV3_4G036420 Cucumis sativus L. HOM05D004383 ORTHO05D005050 8.0e-80 300.8 179 82.7
Potri.006G266300 Populus trichocarpa HOM05D004383 ORTHO05D005050 1.0e-79 300.4 179 81.0
VMungo0647G1739 Vigna mungo HOM05D004383 ORTHO05D005050 1.0e-79 300.4 177 81.4
CiPaw.08G004800 Carya illinoinensis HOM05D004383 ORTHO05D005050 1.8e-79 299.7 176 83.5
MELO3C016948.2 Cucumis melo HOM05D004383 ORTHO05D005050 1.8e-79 299.7 179 82.1
Glyma.14G103800 Glycine max HOM05D004383 ORTHO05D005050 3.0e-79 298.9 177 80.8
Potri.018G016800 Populus trichocarpa HOM05D004383 ORTHO05D005050 3.0e-79 298.9 179 81.0
RcHm_v2.0_Chr6g0299241 Rosa chinensis HOM05D004383 ORTHO05D005050 4.0e-79 298.5 181 80.1
Sed0012000 Sechium edule HOM05D004383 ORTHO05D005050 4.0e-79 298.5 179 82.1
TWI32G1179 Tripterygium wilfordii HOM05D004383 ORTHO05D005050 5.2e-79 298.1 181 81.8
TWI34G1410 Tripterygium wilfordii HOM05D004383 ORTHO05D005050 5.2e-79 298.1 179 82.1
Ca_13075_v3 Cicer arietinum L. HOM05D004383 ORTHO05D005050 8.9e-79 297.4 174 81.0
ClCG05G016150 Citrullus lanatus HOM05D004383 ORTHO05D005050 1.2e-78 297.0 179 81.0
FAN21G1236 Fragaria x ananassa HOM05D004383 ORTHO05D005050 1.2e-78 297.0 182 78.6
FAN16G3501 Fragaria x ananassa HOM05D004383 ORTHO05D005050 1.5e-78 296.6 181 79.0
FvH4_3g24420 Fragaria vesca HOM05D004383 ORTHO05D005050 2.0e-78 296.2 181 79.0
arahy.Tifrunner.gnm1.ann1.S5PPFL Arachis hypogaea HOM05D004383 ORTHO05D005050 2.6e-78 295.8 180 79.4
Ciclev10009603m.g Citrus clementina HOM05D004383 ORTHO05D005050 2.6e-78 295.8 167 87.4
CiPaw.07G231900 Carya illinoinensis HOM05D004383 ORTHO05D005050 3.4e-78 295.4 179 81.0
Prupe.1G396200 Prunus persica HOM05D004383 ORTHO05D005050 3.4e-78 295.4 181 79.0
Hund25610 Selenicereus undatus HOM05D004383 ORTHO05D005050 4.4e-78 295.0 182 80.2
arahy.Tifrunner.gnm1.ann1.W5C21C Arachis hypogaea HOM05D004383 ORTHO05D005050 5.7e-78 294.7 180 78.9
CANSAT64G0435 Cannabis sativa HOM05D004383 ORTHO05D005050 7.5e-78 294.3 181 80.7
BcaB01g06278 Brassica carinata HOM05D004383 ORTHO05D005050 9.8e-78 293.9 181 78.5
CSS0025027 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 9.8e-78 293.9 169 84.6
CARHR202520 Cardamine hirsuta HOM05D004383 ORTHO05D005050 9.8e-78 293.9 181 77.9
Peaxi162Scf00045g01943 Petunia axillaris HOM05D004383 ORTHO05D005050 9.8e-78 293.9 176 83.0
THA.LOC104824960 Tarenaya hassleriana HOM05D004383 ORTHO05D005050 9.8e-78 293.9 181 77.9
BcaB05g21506 Brassica carinata HOM05D004383 ORTHO05D005050 1.3e-77 293.5 181 77.9
Rhsim07G0166500 Rhododendron simsii HOM05D004383 ORTHO05D005050 1.7e-77 293.1 200 75.0
Sed0009310 Sechium edule HOM05D004383 ORTHO05D005050 1.7e-77 293.1 179 80.4
AUR62032433 Chenopodium quinoa HOM05D004383 ORTHO05D005050 2.2e-77 292.7 181 78.5
Thhalv10014802m.g Eutrema salsugineum HOM05D004383 ORTHO05D005050 2.2e-77 292.7 181 77.9
Lj6g0009294 Lotus japonicus HOM05D004383 ORTHO05D005050 2.2e-77 292.7 178 78.1
BcaB01g05499 Brassica carinata HOM05D004383 ORTHO05D005050 2.8e-77 292.4 181 78.5
AUR62024788 Chenopodium quinoa HOM05D004383 ORTHO05D005050 2.8e-77 292.4 181 78.5
THA.LOC104799028 Tarenaya hassleriana HOM05D004383 ORTHO05D005050 2.8e-77 292.4 181 77.9
Sp6g32680 Schrenkiella parvula HOM05D004383 ORTHO05D005050 4.9e-77 291.6 181 77.3
Actinidia14139 Actinidia chinensis HOM05D004383 ORTHO05D005050 1.1e-76 290.4 180 78.3
Ah.12g060630 Amaranthus hybridus HOM05D004383 ORTHO05D005050 1.4e-76 290.0 183 79.8
Cpa.g.sc148.37 Carica papaya HOM05D004383 ORTHO05D005050 1.4e-76 290.0 176 82.4
Carub.0006s0928 Capsella rubella HOM05D004383 ORTHO05D005050 2.4e-76 289.3 181 77.9
TAR625G0171 Trochodendron aralioides HOM05D004383 ORTHO05D005050 2.4e-76 289.3 178 78.7
TAR625G1552 Trochodendron aralioides HOM05D004383 ORTHO05D005050 2.4e-76 289.3 178 78.7
vmacro05117 Vaccinium macrocarpon HOM05D004383 ORTHO05D005050 2.4e-76 289.3 166 84.9
Nitab4.5_0000264g0060 Nicotiana tabacum HOM05D004383 ORTHO05D005050 4.1e-76 288.5 176 82.4
Aa31LG3G16320 Aethionema arabicum HOM05D004383 ORTHO05D005050 5.4e-76 288.1 181 76.8
Lalb_Chr24g0401921 Lupinus albus HOM05D004383 ORTHO05D005050 5.4e-76 288.1 181 78.5
Solyc08g006650.3 Solanum lycopersicum HOM05D004383 ORTHO05D005050 5.4e-76 288.1 176 81.2
Sopen08g002600 Solanum pennellii HOM05D004383 ORTHO05D005050 5.4e-76 288.1 176 81.2
PGSC0003DMG400026285 Solanum tuberosum HOM05D004383 ORTHO05D005050 5.4e-76 288.1 176 81.2
SGA_v2.0_scaffold4G02162 Striga asiatica HOM05D004383 ORTHO05D005050 5.4e-76 288.1 181 78.5
A03p04760 Brassica napus HOM05D004383 ORTHO05D005050 7.0e-76 287.7 182 77.5
QL02p018464 Quercus lobata HOM05D004383 ORTHO05D005050 7.0e-76 287.7 167 84.4
CAN.G285.20 Capsicum annuum HOM05D004383 ORTHO05D005050 9.2e-76 287.3 176 80.7
Nn3g19885 Nelumbo nucifera HOM05D004383 ORTHO05D005050 9.2e-76 287.3 181 76.2
AL6G21360 Arabidopsis lyrata HOM05D004383 ORTHO05D005050 1.2e-75 287.0 181 77.3
AT5G10780 Arabidopsis thaliana HOM05D004383 ORTHO05D005050 1.2e-75 287.0 181 77.3
EL10Ac2g02480 Beta vulgaris HOM05D004383 ORTHO05D005050 1.6e-75 286.6 176 79.5
BcaC03g13332 Brassica carinata HOM05D004383 ORTHO05D005050 1.6e-75 286.6 182 76.9
A02p00660 Brassica napus HOM05D004383 ORTHO05D005050 1.6e-75 286.6 182 76.9
C02p04660 Brassica napus HOM05D004383 ORTHO05D005050 1.6e-75 286.6 182 76.9
Sabra18G0020200 Salix brachista HOM05D004383 ORTHO05D005050 2.0e-75 286.2 177 79.7
SGA_v2.0_scaffold169G38599 Striga asiatica HOM05D004383 ORTHO05D005050 3.5e-75 285.4 181 77.3
MSTRG.13961 Avicennia marina HOM05D004383 ORTHO05D005050 4.5e-75 285.0 179 77.7
BraA02t05050Z Brassica rapa HOM05D004383 ORTHO05D005050 4.5e-75 285.0 182 76.4
BraA03t09816Z Brassica rapa HOM05D004383 ORTHO05D005050 5.9e-75 284.6 182 76.9
PSO017G0706 Papaver somniferum HOM05D004383 ORTHO05D005050 7.8e-75 284.3 182 76.4
PSO170G1218 Papaver somniferum HOM05D004383 ORTHO05D005050 7.8e-75 284.3 182 76.4
FAN05G0819 Fragaria x ananassa HOM05D004383 ORTHO05D005050 1.0e-74 283.9 174 79.3
C03p05470 Brassica napus HOM05D004383 ORTHO05D005050 1.7e-74 283.1 170 80.0
FvH4_6g27370 Fragaria vesca HOM05D004383 ORTHO05D005050 2.3e-74 282.7 174 78.7
Oeu010290.1 Olea europaea HOM05D004383 ORTHO05D005050 2.9e-74 282.3 179 75.4
Sabra06G0208900 Salix brachista HOM05D004383 ORTHO05D005050 6.6e-74 281.2 169 79.9
FAN14G2933 Fragaria x ananassa HOM05D004383 ORTHO05D005050 9.5e-73 277.3 179 76.5
Nn1g03128 Nelumbo nucifera HOM05D004383 ORTHO05D005050 1.2e-72 276.9 178 77.5
Migut.E01443 Erythranthe guttata HOM05D004383 ORTHO05D005050 1.6e-72 276.6 176 77.8
BolC3t13057H Brassica oleracea HOM05D004383 ORTHO05D005050 2.8e-72 275.8 172 77.3
MBI14_g31383_MAGBIO Magnolia biondii HOM05D004383 ORTHO05D005050 6.1e-72 274.6 177 77.4
Nitab4.5_0001362g0040 Nicotiana tabacum HOM05D004383 ORTHO05D005050 6.1e-72 274.6 169 81.7
Migut.A00383 Erythranthe guttata HOM05D004383 ORTHO05D005050 1.0e-71 273.9 181 75.1
BolC2t06425H Brassica oleracea HOM05D004383 ORTHO05D003478 2.3e-71 272.7 167 79.0
Haze_21384 Corylus avellana HOM05D004383 ORTHO05D005050 5.2e-71 271.6 200 70.0
Oeu021906.1 Olea europaea HOM05D004383 ORTHO05D005050 6.8e-71 271.2 167 79.6
CDE02G0236 Ceratophyllum demersum HOM05D004383 ORTHO05D005050 1.2e-70 270.4 179 75.4
CDE05G2494 Ceratophyllum demersum HOM05D004383 ORTHO05D005050 2.0e-70 269.6 174 77.0
SalBow8G1520 Salvia bowleyana HOM05D004383 ORTHO05D005050 3.4e-70 268.9 166 79.5
ATR0580G398 Amborella trichopoda HOM05D004383 ORTHO05D005050 5.8e-70 268.1 174 75.3
DCAR_003054 Daucus carota HOM05D004383 ORTHO05D005050 5.8e-70 268.1 166 80.1
SEGI_36915 Sequoiadendron giganteum HOM05D004383 ORTHO05D005050 1.3e-69 266.9 164 75.6
FAN02G2967 Fragaria x ananassa HOM05D004383 ORTHO05D005050 6.4e-69 264.6 160 80.0
MD08G1052600 Malus domestica HOM05D004383 ORTHO05D005050 1.9e-68 263.1 181 74.6
unitig_32.g11121 Utricularia gibba HOM05D004383 ORTHO05D005050 1.9e-68 263.1 166 78.9
Zm00001eb394360 Zea mays HOM05D004383 ORTHO05D005050 2.4e-68 262.7 176 72.7
Os03g0360500 Oryza sativa ssp. japonica HOM05D004383 ORTHO05D005050 7.0e-68 261.2 181 71.8
Dinv10290 Davidia involucrata HOM05D004383 ORTHO05D005050 1.5e-65 253.4 149 82.6
vmacro11269 Vaccinium macrocarpon HOM05D004383 ORTHO05D005050 9.5e-65 250.8 257 54.1
SMO367G0045 Selaginella moellendorffii HOM05D004383 ORTHO05D005050 2.1e-64 249.6 172 69.2
Sc23g0006160 Simmondsia chinensis HOM05D004383 ORTHO05D005050 8.9e-63 244.2 147 83.0
AagrBONN_evm.TU.Sc2ySwM_368.2778 Anthoceros agrestis HOM05D004383 ORTHO05D005050 4.1e-60 235.3 179 65.4
Mapoly0039s0015 Marchantia polymorpha HOM05D004383 ORTHO05D005050 4.1e-60 235.3 180 63.3
Pp3c18_15950 Physcomitrium patens HOM05D004383 ORTHO05D005050 1.9e-57 226.5 175 62.9
Actinidia10531 Actinidia chinensis HOM05D004383 ORTHO05D005050 6.2e-56 221.5 180 66.1
BcaNung06638 Brassica carinata HOM05D004383 ORTHO05D005050 1.6e-48 196.8 134 73.9
CBR_g29297 Chara braunii HOM05D004383 ORTHO05D005050 3.1e-47 192.6 165 56.4
Aqoxy7G03322 Aquilegia oxysepala HOM05D004383 ORTHO05D005050 2.7e-43 179.5 170 57.1
Dinv01903 Davidia involucrata HOM05D004383 ORTHO05D005050 8.1e-40 167.9 99 83.8
HPP92_021944 Vanilla planifolia HOM05D004383 ORTHO05D005050 1.6e-35 153.7 115 67.0
TAR383G0062 Trochodendron aralioides HOM05D004383 ORTHO05D005050 7.8e-35 151.4 101 77.2
PRCOL_00000905 Prasinoderma coloniale HOM05D004383 ORTHO05D005050 4.8e-32 142.1 166 42.8
HPP92_021971 Vanilla planifolia HOM05D004383 ORTHO05D005050 5.3e-31 138.7 80 82.5
MCO09G762 Micromonas commoda HOM05D004383 ORTHO05D005050 2.3e-26 123.2 178 37.1
TAR383G0705 Trochodendron aralioides HOM05D004383 ORTHO05D005050 4.8e-24 115.5 67 80.6
arahy.Tifrunner.gnm1.ann1.76P32W Arachis hypogaea HOM05D004383 ORTHO05D005050 2.4e-23 113.2 76 72.4
arahy.Tifrunner.gnm1.ann1.90HH72 Arachis hypogaea HOM05D004383 ORTHO05D005050 4.0e-23 112.5 75 73.3
DCAR_031730 Daucus carota HOM05D004383 ORTHO05D005050 1.5e-22 110.5 100 58.0
CSS0012906 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 1.3e-21 107.5 54 90.7
Medtr8g027900 Medicago truncatula HOM05D000337 ORTHO05D000297 4.9e-21 105.5 206 37.4
CSS0013447 Camellia sinensis var. sinensis HOM05D004383 ORTHO05D005050 8.4e-21 104.8 57 84.2
Cfa024789 Carpinus fangiana HOM05D004383 ORTHO05D005050 9.6e-17 91.3 153 37.3
Cre07.g351700 Chlamydomonas reinhardtii HOM05D004383 ORTHO05D005050 2.8e-16 89.7 154 35.1
DCAR_030622 Daucus carota HOM05D001936 ORTHO05D005050 2.8e-16 89.7 54 77.8
Oeu048647.1 Olea europaea HOM05D004383 ORTHO05D005050 6.2e-16 88.6 62 72.6
Lalb_Chr15g0080471 Lupinus albus HOM05D004383 ORTHO05D005050 2.5e-12 76.6 89 47.2
Atru.chr7.2585 Acer truncatum HOM05D004383 ORTHO05D005050 1.2e-11 74.3 49 69.4
Atru.chr7.2578 Acer truncatum HOM05D004610 ORTHO05D001148 2.7e-11 73.2 51 70.6
arahy.Tifrunner.gnm1.ann1.54XXT5 Arachis hypogaea HOM05D004383 ORTHO05D005050 1.0e-10 71.2 37 86.5
Lalb_Chr15g0078021 Lupinus albus HOM05D004383 ORTHO05D005050 6.7e-10 68.6 87 46.0
Lalb_Chr10g0093521 Lupinus albus HOM05D004383 ORTHO05D005050 1.5e-09 67.4 38 84.2
MD10G1133700 Malus domestica HOM05D004383 ORTHO05D005050 1.3e-08 64.3 55 58.2
Lalb_Chr01g0013281 Lupinus albus HOM05D004383 ORTHO05D005050 2.2e-08 63.5 50 62.0
MD10G1176800 Malus domestica HOM05D004383 ORTHO05D005050 2.4e-07 60.1 42 64.3
RcHm_v2.0_Chr3g0494951 Rosa chinensis HOM05D004383 ORTHO05D005050 7.7e-06 55.1 30 80.0


User provided reference genes

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