Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0200921 Helianthus annuus HOM05D003984 ORTHO05D004740 6.4e-137 490.7 247 100.0
ECA238G2056 Erigeron canadensis HOM05D003984 ORTHO05D004740 4.8e-116 421.4 261 83.9
HanXRQChr14g0460861 Helianthus annuus HOM05D003984 ORTHO05D004740 5.9e-114 414.5 247 86.2
Lsat_1_v5_gn_2_115481 Lactuca sativa HOM05D003984 ORTHO05D004740 5.9e-114 414.5 247 85.8
MD07G1182100 Malus domestica HOM05D003984 ORTHO05D004740 6.7e-110 401.0 260 80.0
Prupe.2G220800 Prunus persica HOM05D003984 ORTHO05D004740 8.8e-110 400.6 259 79.9
RcHm_v2.0_Chr1g0364411 Rosa chinensis HOM05D003984 ORTHO05D004740 2.6e-109 399.1 260 78.8
MD01G1114200 Malus domestica HOM05D003984 ORTHO05D004740 4.4e-109 398.3 260 79.6
COL.COLO4_23777 Corchorus olitorius HOM05D003984 ORTHO05D004740 4.8e-108 394.8 258 79.1
Manes.10G040500 Manihot esculenta HOM05D003984 ORTHO05D004740 7.0e-107 391.0 258 79.5
QL08p057270 Quercus lobata HOM05D003984 ORTHO05D004740 4.5e-106 388.3 260 77.7
ClCG09G020350 Citrullus lanatus HOM05D003984 ORTHO05D004740 7.7e-106 387.5 259 77.2
HanXRQChr12g0367731 Helianthus annuus HOM05D003984 ORTHO05D004740 1.3e-105 386.7 259 77.2
Manes.07G104700 Manihot esculenta HOM05D003984 ORTHO05D004740 2.2e-105 386.0 258 78.3
CANSAT56G1305 Cannabis sativa HOM05D003984 ORTHO05D004740 2.9e-105 385.6 260 76.5
Peaxi162Scf01024g00120 Petunia axillaris HOM05D003984 ORTHO05D004740 3.8e-105 385.2 259 76.1
Solyc04g049710.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 6.5e-105 384.4 260 75.0
Migut.F02015 Erythranthe guttata HOM05D003984 ORTHO05D004740 8.5e-105 384.0 255 77.6
FAN06G2832 Fragaria x ananassa HOM05D003984 ORTHO05D004740 8.5e-105 384.0 260 76.5
FAN10G1795 Fragaria x ananassa HOM05D003984 ORTHO05D004740 8.5e-105 384.0 260 76.5
FvH4_7g20520 Fragaria vesca HOM05D003984 ORTHO05D004740 1.1e-104 383.6 260 76.2
FAN03G0045 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.1e-104 383.6 260 76.2
Sopen04g019960 Solanum pennellii HOM05D003984 ORTHO05D004740 1.1e-104 383.6 260 75.0
Atru.chr12.610 Acer truncatum HOM05D003984 ORTHO05D004740 1.5e-104 383.3 258 76.0
CsaV3_5G026080 Cucumis sativus L. HOM05D003984 ORTHO05D004740 1.5e-104 383.3 259 76.1
Thecc.10G065000 Theobroma cacao HOM05D003984 ORTHO05D004740 2.5e-104 382.5 258 77.1
Nitab4.5_0001248g0030 Nicotiana tabacum HOM05D003984 ORTHO05D004740 5.5e-104 381.3 260 74.6
SGA_v2.0_scaffold62G21447 Striga asiatica HOM05D003984 ORTHO05D004740 5.5e-104 381.3 259 76.1
CiPaw.01G278000 Carya illinoinensis HOM05D003984 ORTHO05D004740 7.2e-104 380.9 260 75.8
Potri.010G215500 Populus trichocarpa HOM05D003984 ORTHO05D004740 7.2e-104 380.9 254 79.1
Ciclev10032445m.g Citrus clementina HOM05D003984 ORTHO05D004740 9.4e-104 380.6 259 77.2
Nitab4.5_0000830g0100 Nicotiana tabacum HOM05D003984 ORTHO05D004740 9.4e-104 380.6 260 74.6
Dinv11820 Davidia involucrata HOM05D003984 ORTHO05D004740 1.6e-103 379.8 260 75.8
CSS0011111 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 2.1e-103 379.4 259 76.8
CSS0036351 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 6.1e-103 377.9 260 74.6
CiPaw.02G177500 Carya illinoinensis HOM05D003984 ORTHO05D004740 6.1e-103 377.9 261 76.6
Lj8A94T49 Lonicera japonica HOM05D003984 ORTHO05D004740 6.1e-103 377.9 261 74.7
Potri.008G046000 Populus trichocarpa HOM05D003984 ORTHO05D004740 6.1e-103 377.9 257 77.8
EL10Ac2g03538 Beta vulgaris HOM05D003984 ORTHO05D004740 1.0e-102 377.1 260 76.5
CSS0025505 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 1.0e-102 377.1 260 74.6
MSTRG.27450 Avicennia marina HOM05D003984 ORTHO05D004740 1.8e-102 376.3 255 75.7
Duzib114G0791 Durio zibethinus HOM05D003984 ORTHO05D004740 1.8e-102 376.3 258 77.1
TWI15G0393 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 1.8e-102 376.3 254 76.4
Sed0003028 Sechium edule HOM05D003984 ORTHO05D004740 2.3e-102 375.9 260 75.8
Cfa001574 Carpinus fangiana HOM05D003984 ORTHO05D004740 3.0e-102 375.6 267 75.3
AUR62036011 Chenopodium quinoa HOM05D003984 ORTHO05D004740 3.0e-102 375.6 259 75.3
TAR633G2252 Trochodendron aralioides HOM05D003984 ORTHO05D004740 5.2e-102 374.8 260 74.6
arahy.Tifrunner.gnm1.ann1.V3HSKN Arachis hypogaea HOM05D003984 ORTHO05D004740 6.7e-102 374.4 248 79.0
Lj5g0020432 Lotus japonicus HOM05D003984 ORTHO05D004740 6.7e-102 374.4 260 75.8
CSS0002243 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 8.8e-102 374.0 251 78.1
Peaxi162Scf00195g00824 Petunia axillaris HOM05D003984 ORTHO05D004740 1.1e-101 373.6 259 74.9
Dinv31376 Davidia involucrata HOM05D003984 ORTHO05D004740 1.5e-101 373.2 260 75.0
Ah.10g033080 Amaranthus hybridus HOM05D003984 ORTHO05D004740 2.0e-101 372.9 283 71.0
Rhsim09G0154900 Rhododendron simsii HOM05D003984 ORTHO05D004740 3.3e-101 372.1 252 76.6
CAN.G186.31 Capsicum annuum HOM05D003984 ORTHO05D004740 4.4e-101 371.7 251 76.5
Duzib128G0096 Durio zibethinus HOM05D003984 ORTHO05D004740 4.4e-101 371.7 259 76.4
Oeu055063.1 Olea europaea HOM05D003984 ORTHO05D004740 4.4e-101 371.7 260 73.8
PGSC0003DMG400032551 Solanum tuberosum HOM05D003984 ORTHO05D004740 5.7e-101 371.3 251 75.3
Sabra08G0032300 Salix brachista HOM05D003984 ORTHO05D004740 7.4e-101 370.9 265 75.8
Lalb_Chr21g0307521 Lupinus albus HOM05D003984 ORTHO05D004740 9.7e-101 370.5 267 74.9
PGR044G2197 Punica granatum HOM05D003984 ORTHO05D004740 9.7e-101 370.5 258 74.8
Actinidia13840 Actinidia chinensis HOM05D003984 ORTHO05D004740 1.3e-100 370.2 260 74.2
Lalb_Chr06g0164371 Lupinus albus HOM05D003984 ORTHO05D004740 1.3e-100 370.2 259 75.3
Gorai.012G092700 Gossypium raimondii HOM05D003984 ORTHO05D004740 2.8e-100 369.0 258 75.2
Medtr1g116240 Medicago truncatula HOM05D003984 ORTHO05D004740 2.8e-100 369.0 260 74.6
DCAR_015251 Daucus carota HOM05D003984 ORTHO05D004740 3.7e-100 368.6 250 76.0
Cc09_g02350 Coffea canephora HOM05D003984 ORTHO05D004740 4.8e-100 368.2 260 73.5
Hund22456 Selenicereus undatus HOM05D003984 ORTHO05D004740 6.3e-100 367.9 260 75.8
GSVIVG01032647001 Vitis vinifera HOM05D003984 ORTHO05D004740 6.3e-100 367.9 260 74.6
Solyc04g009550.3 Solanum lycopersicum HOM05D003984 ORTHO05D004740 1.1e-99 367.1 246 75.2
TPR.G10390 Trifolium pratense HOM05D003984 ORTHO05D004740 1.1e-99 367.1 261 74.3
Eucgr.J01137 Eucalyptus grandis HOM05D003984 ORTHO05D004740 1.8e-99 366.3 257 74.3
SGA_v2.0_scaffold329G48849 Striga asiatica HOM05D003984 ORTHO05D004740 1.8e-99 366.3 260 74.6
DCAR_019150 Daucus carota HOM05D003984 ORTHO05D004740 5.3e-99 364.8 259 72.6
VMungo0720G0811 Vigna mungo HOM05D003984 ORTHO05D004740 1.2e-98 363.6 261 74.7
Lalb_Chr02g0144171 Lupinus albus HOM05D003984 ORTHO05D004740 1.6e-98 363.2 260 73.8
TWI63G0288 Tripterygium wilfordii HOM05D003984 ORTHO05D004740 2.0e-98 362.8 251 74.9
Glyma.10G294300 Glycine max HOM05D003984 ORTHO05D004740 4.5e-98 361.7 260 73.5
Gohir.A05G343700 Gossypium hirsutum HOM05D003984 ORTHO05D004740 4.5e-98 361.7 258 74.0
AUR62041612 Chenopodium quinoa HOM05D003984 ORTHO05D004740 1.7e-97 359.8 248 75.4
Nn2g10608 Nelumbo nucifera HOM05D003984 ORTHO05D004740 1.7e-97 359.8 262 71.4
Psat6g240040 Pisum sativum HOM05D003984 ORTHO05D004740 1.7e-97 359.8 260 73.1
Glyma.20G244200 Glycine max HOM05D003984 ORTHO05D004740 2.9e-97 359.0 260 73.5
Nitab4.5_0000691g0240 Nicotiana tabacum HOM05D003984 ORTHO05D004740 2.9e-97 359.0 259 71.8
PSO384G2137 Papaver somniferum HOM05D003984 ORTHO05D004740 2.9e-97 359.0 252 73.4
Sabra10G0166500 Salix brachista HOM05D003984 ORTHO05D004740 3.8e-97 358.6 282 69.5
Nitab4.5_0004104g0120 Nicotiana tabacum HOM05D003984 ORTHO05D004740 5.0e-97 358.2 250 74.0
Lsat_1_v5_gn_8_21240 Lactuca sativa HOM05D003984 ORTHO05D004740 6.5e-97 357.8 261 74.3
PSO339G0239 Papaver somniferum HOM05D003984 ORTHO05D004740 8.5e-97 357.5 252 72.2
Phvul.007G005800 Phaseolus vulgaris HOM05D003984 ORTHO05D004740 8.5e-97 357.5 261 73.6
Sed0000226 Sechium edule HOM05D003984 ORTHO05D004740 1.1e-96 357.1 260 72.7
TAR623G0696 Trochodendron aralioides HOM05D003984 ORTHO05D004740 1.9e-96 356.3 251 72.9
Migut.F01787 Erythranthe guttata HOM05D003984 ORTHO05D004740 2.5e-96 355.9 261 72.0
Gohir.D10G216200 Gossypium hirsutum HOM05D003984 ORTHO05D004740 3.2e-96 355.5 258 73.3
Gorai.011G241800 Gossypium raimondii HOM05D003984 ORTHO05D004740 5.5e-96 354.8 258 73.3
Gohir.A10G208060 Gossypium hirsutum HOM05D003984 ORTHO05D004740 1.6e-95 353.2 258 73.3
THA.LOC104824242 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 3.6e-95 352.1 249 73.5
SalBow3G2899 Salvia bowleyana HOM05D003984 ORTHO05D004740 8.0e-95 350.9 256 72.7
THA.LOC104825886 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 1.4e-94 350.1 253 72.3
arahy.Tifrunner.gnm1.ann1.B234YK Arachis hypogaea HOM05D003984 ORTHO05D004740 1.8e-94 349.7 301 65.1
THA.LOC104810167 Tarenaya hassleriana HOM05D003984 ORTHO05D004740 2.3e-94 349.4 248 73.0
Aqoxy4G03159 Aquilegia oxysepala HOM05D003984 ORTHO05D004740 3.4e-93 345.5 274 67.5
Nn2g12956 Nelumbo nucifera HOM05D003984 ORTHO05D004740 3.4e-93 345.5 260 71.9
Oeu057248.1 Olea europaea HOM05D003984 ORTHO05D004740 5.7e-93 344.7 254 70.5
Lj1A928T58 Lonicera japonica HOM05D003984 ORTHO05D004740 1.3e-92 343.6 301 63.8
ATR0594G132 Amborella trichopoda HOM05D003984 ORTHO05D004740 8.3e-92 340.9 260 68.5
Aa31sc33G70 Aethionema arabicum HOM05D003984 ORTHO05D004740 3.1e-91 339.0 256 69.9
BcaB02g07705 Brassica carinata HOM05D003984 ORTHO05D004740 7.0e-91 337.8 257 70.0
PSO339G2647 Papaver somniferum HOM05D003984 ORTHO05D004740 9.1e-91 337.4 262 70.2
AL5G36110 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 1.2e-90 337.0 257 68.9
A07p22390 Brassica napus HOM05D003984 ORTHO05D004740 2.7e-90 335.9 258 69.4
AT3G55000 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 4.5e-90 335.1 257 69.3
BcaC08g44716 Brassica carinata HOM05D003984 ORTHO05D004740 7.7e-90 334.3 259 68.7
Carub.0005s2162 Capsella rubella HOM05D003984 ORTHO05D004740 7.7e-90 334.3 257 69.3
C06p22550 Brassica napus HOM05D003984 ORTHO05D004740 1.0e-89 334.0 259 68.7
HPP92_017944 Vanilla planifolia HOM05D003984 ORTHO05D004740 1.3e-89 333.6 256 69.9
BolC6t37445H Brassica oleracea HOM05D003984 ORTHO05D004740 1.7e-89 333.2 258 68.6
Os11g0102600 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 1.7e-89 333.2 257 68.5
Os12g0102200 Oryza sativa ssp. japonica HOM05D003984 ORTHO05D004740 1.7e-89 333.2 257 68.5
CARHR165000 Cardamine hirsuta HOM05D003984 ORTHO05D004740 2.9e-89 332.4 252 69.8
CDE09G0608 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 8.5e-89 330.9 261 68.6
Thhalv10010647m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 8.5e-89 330.9 257 67.3
Sp5g07420 Schrenkiella parvula HOM05D003984 ORTHO05D004740 9.4e-88 327.4 257 67.3
Zm00001eb094350 Zea mays HOM05D003984 ORTHO05D004740 9.4e-88 327.4 256 67.6
Gohir.D04G082100 Gossypium hirsutum HOM05D003984 ORTHO05D004740 1.6e-87 326.6 224 77.2
HPP92_019786 Vanilla planifolia HOM05D003984 ORTHO05D004740 2.1e-87 326.2 260 66.9
Sp5g07430 Schrenkiella parvula HOM05D003984 ORTHO05D004740 3.6e-87 325.5 252 69.0
BraA07t29915Z Brassica rapa HOM05D003984 ORTHO05D004740 6.1e-87 324.7 277 64.6
AL5G36120 Arabidopsis lyrata HOM05D003984 ORTHO05D004740 1.8e-86 323.2 257 66.9
Haze_16954 Corylus avellana HOM05D003984 ORTHO05D004740 3.0e-86 322.4 238 71.8
Carub.0005s2163 Capsella rubella HOM05D003984 ORTHO05D004740 4.0e-86 322.0 259 67.6
CDE02G0952 Ceratophyllum demersum HOM05D003984 ORTHO05D004740 5.2e-86 321.6 252 68.7
Zm00001eb163130 Zea mays HOM05D003984 ORTHO05D004740 2.0e-85 319.7 256 67.2
AT3G55005 Arabidopsis thaliana HOM05D003984 ORTHO05D004740 7.5e-85 317.8 257 66.9
Sc20g0002240 Simmondsia chinensis HOM05D003984 ORTHO05D004740 2.2e-84 316.2 264 66.3
CARHR165010 Cardamine hirsuta HOM05D003984 ORTHO05D004740 5.4e-83 311.6 256 64.1
unitig_0.g190 Utricularia gibba HOM05D003984 ORTHO05D004740 4.5e-82 308.5 235 68.5
Lj1C926T5 Lonicera japonica HOM05D003984 ORTHO05D004740 7.7e-82 307.8 261 64.0
MELO3C025490.2 Cucumis melo HOM05D003984 ORTHO05D004740 1.0e-81 307.4 205 78.0
Ca_11380_v3 Cicer arietinum L. HOM05D003984 ORTHO05D004740 1.5e-80 303.5 268 63.8
BraA09t40255Z Brassica rapa HOM05D003984 ORTHO05D004740 2.5e-80 302.8 257 63.0
C08p30240 Brassica napus HOM05D003984 ORTHO05D004740 9.5e-80 300.8 256 63.3
A09p48020 Brassica napus HOM05D003984 ORTHO05D004740 2.8e-79 299.3 257 62.6
MSTRG.9196 Avicennia marina HOM05D003984 ORTHO05D004740 4.7e-79 298.5 198 77.3
Sopen04g004710 Solanum pennellii HOM05D003984 ORTHO05D004740 2.3e-78 296.2 189 78.3
BcaNung04652 Brassica carinata HOM05D003984 ORTHO05D004740 8.9e-78 294.3 256 62.5
BcaB01g00136 Brassica carinata HOM05D003984 ORTHO05D004740 1.5e-77 293.5 255 62.4
Thhalv10010676m.g Eutrema salsugineum HOM05D003984 ORTHO05D004740 5.7e-77 291.6 237 66.7
BolC8t50631H Brassica oleracea HOM05D003984 ORTHO05D004740 1.1e-75 287.3 250 61.6
FAN01G2342 Fragaria x ananassa HOM05D003984 ORTHO05D004740 5.9e-74 281.6 144 95.1
Sc20g0002230 Simmondsia chinensis HOM05D003984 ORTHO05D004740 4.0e-70 268.9 193 73.6
FAN06G1180 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.4e-51 207.2 167 64.7
AagrBONN_evm.TU.Sc2ySwM_344.1695 Anthoceros agrestis HOM05D003984 ORTHO05D004740 1.5e-40 170.6 213 48.8
Pp3c14_5580 Physcomitrium patens HOM05D003984 ORTHO05D004740 5.6e-40 168.7 184 49.5
Mapoly0066s0078 Marchantia polymorpha HOM05D003984 ORTHO05D004740 3.6e-39 166.0 192 50.0
FAN06G2469 Fragaria x ananassa HOM05D003984 ORTHO05D004740 1.6e-31 140.6 74 97.3
TAR624G0784 Trochodendron aralioides HOM05D003984 ORTHO05D004740 1.6e-31 140.6 93 75.3
SEGI_35779 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 1.4e-30 137.5 238 39.5
CBR_g37750 Chara braunii HOM05D000019 ORTHO05D000002 7.1e-27 125.2 147 49.0
SEGI_13922 Sequoiadendron giganteum HOM05D003984 ORTHO05D004740 2.7e-26 123.2 76 80.3
Cpa.g.sc1.281 Carica papaya HOM05D003984 ORTHO05D004740 1.4e-19 100.9 93 58.1
SMO356G0399 Selaginella moellendorffii HOM05D003984 ORTHO05D004740 4.2e-19 99.4 177 39.5
CBR_g10977 Chara braunii HOM05D003984 ORTHO05D004740 2.3e-17 93.6 124 41.1
Actinidia29191 Actinidia chinensis HOM05D003984 ORTHO05D004740 2.5e-16 90.1 101 52.5
HanXRQChr17g0557371 Helianthus annuus HOM05D000549 ORTHO05D004740 6.3e-15 85.5 41 92.7
RcHm_v2.0_Chr2g0140211 Rosa chinensis HOM05D003984 ORTHO05D004740 8.4e-12 75.1 43 72.1
Nn6g33815 Nelumbo nucifera HOM05D003984 ORTHO05D004740 1.4e-11 74.3 41 78.0
CSS0046661 Camellia sinensis var. sinensis HOM05D003984 ORTHO05D004740 7.2e-11 72.0 40 75.0
AUR62035988 Chenopodium quinoa HOM05D003984 ORTHO05D004740 6.1e-10 68.9 85 47.1
PRCOL_00000040 Prasinoderma coloniale HOM05D003984 ORTHO05D004740 5.1e-09 65.9 138 35.5
MCO05G642 Micromonas commoda HOM05D003984 ORTHO05D004740 1.6e-07 60.8 105 33.3
Sabra18G0026300 Salix brachista HOM05D002732 ORTHO05D002955 1.4e-06 57.8 32 90.6


User provided reference genes

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