Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0200341 Helianthus annuus HOM05D000125 ORTHO05D000120 3.7e-215 751.1 345 100.0
HanXRQChr05g0132781 Helianthus annuus HOM05D000125 ORTHO05D000120 5.2e-100 368.6 384 52.3
HanXRQChr02g0054421 Helianthus annuus HOM05D000125 ORTHO05D000120 4.1e-97 359.0 383 50.1
HanXRQChr02g0054671 Helianthus annuus HOM05D000125 ORTHO05D000120 1.4e-92 344.0 374 51.1
HanXRQChr02g0054441 Helianthus annuus HOM05D000125 ORTHO05D000120 3.0e-92 342.8 334 53.3
HanXRQChr02g0054591 Helianthus annuus HOM05D000125 ORTHO05D000120 1.2e-91 340.9 377 51.7
HanXRQChr05g0132221 Helianthus annuus HOM05D000125 ORTHO05D000120 1.1e-89 334.3 380 49.7
HanXRQChr02g0054741 Helianthus annuus HOM05D000125 ORTHO05D000120 2.7e-88 329.7 375 50.7
HanXRQChr02g0054611 Helianthus annuus HOM05D000125 ORTHO05D000120 8.5e-87 324.7 305 56.1
HanXRQChr01g0025291 Helianthus annuus HOM05D000125 ORTHO05D000120 3.6e-77 292.7 309 48.2
Lsat_1_v5_gn_2_22961 Lactuca sativa HOM05D000125 ORTHO05D000120 3.9e-71 272.7 394 42.1
HanXRQChr09g0245281 Helianthus annuus HOM05D000125 ORTHO05D000120 1.7e-63 247.3 325 41.8
Lsat_1_v5_gn_8_80460 Lactuca sativa HOM05D000125 ORTHO05D000120 3.3e-62 243.0 324 42.9
Lsat_1_v5_gn_8_80280 Lactuca sativa HOM05D000125 ORTHO05D000120 5.6e-62 242.3 330 43.0
Lsat_1_v5_gn_8_80160 Lactuca sativa HOM05D000125 ORTHO05D000120 2.1e-61 240.4 363 40.5
HanXRQChr16g0498831 Helianthus annuus HOM05D000125 ORTHO05D000120 3.4e-59 233.0 332 42.2
Lsat_1_v5_gn_8_81081 Lactuca sativa HOM05D000125 ORTHO05D000120 9.2e-57 224.9 336 41.1
HanXRQChr16g0499041 Helianthus annuus HOM05D000125 ORTHO05D000120 4.6e-56 222.6 323 41.8
Lsat_1_v5_gn_8_81380 Lactuca sativa HOM05D000125 ORTHO05D000120 1.0e-55 221.5 370 39.7
Lsat_1_v5_gn_9_31861 Lactuca sativa HOM05D000125 ORTHO05D000120 1.0e-55 221.5 234 47.4
HanXRQChr16g0499051 Helianthus annuus HOM05D000125 ORTHO05D000120 1.7e-55 220.7 227 51.1
HanXRQChr09g0261141 Helianthus annuus HOM05D000125 ORTHO05D000120 2.3e-55 220.3 322 38.5
HanXRQChr09g0261061 Helianthus annuus HOM05D000125 ORTHO05D000120 3.9e-55 219.5 309 38.8
Lsat_1_v5_gn_9_32180 Lactuca sativa HOM05D000125 ORTHO05D000120 3.9e-55 219.5 340 37.1
HanXRQChr16g0499231 Helianthus annuus HOM05D000125 ORTHO05D000120 1.1e-54 218.0 324 41.0
HanXRQChr09g0261121 Helianthus annuus HOM05D000125 ORTHO05D000120 1.5e-54 217.6 306 38.9
HanXRQChr16g0499221 Helianthus annuus HOM05D000125 ORTHO05D000120 1.5e-54 217.6 331 42.3
HanXRQChr16g0499201 Helianthus annuus HOM05D000125 ORTHO05D000120 3.3e-54 216.5 324 40.7
HanXRQChr09g0261051 Helianthus annuus HOM05D000125 ORTHO05D000120 5.6e-54 215.7 306 40.8
HanXRQChr16g0499071 Helianthus annuus HOM05D000125 ORTHO05D000120 2.1e-53 213.8 320 40.9
HanXRQChr08g0209921 Helianthus annuus HOM05D000125 ORTHO05D000120 2.8e-53 213.4 321 40.2
HanXRQChr10g0313721 Helianthus annuus HOM05D000125 ORTHO05D000120 8.1e-53 211.8 330 37.9
HanXRQChr09g0261071 Helianthus annuus HOM05D000125 ORTHO05D000120 3.1e-52 209.9 326 36.8
HanXRQChr16g0499181 Helianthus annuus HOM05D000125 ORTHO05D000120 1.2e-51 208.0 326 41.7
HanXRQChr16g0498981 Helianthus annuus HOM05D000125 ORTHO05D000120 5.8e-51 205.7 331 41.1
Lsat_1_v5_gn_8_80121 Lactuca sativa HOM05D000125 ORTHO05D000120 7.6e-51 205.3 400 34.8
HanXRQChr13g0409971 Helianthus annuus HOM05D000125 ORTHO05D000120 1.3e-50 204.5 322 37.0
HanXRQChr08g0209941 Helianthus annuus HOM05D000125 ORTHO05D000120 3.8e-50 203.0 292 41.1
HanXRQChr08g0209771 Helianthus annuus HOM05D000125 ORTHO05D000120 8.4e-50 201.8 330 38.5
HanXRQChr17g0551181 Helianthus annuus HOM05D000125 ORTHO05D000120 1.4e-49 201.1 330 38.2
HanXRQChr04g0096141 Helianthus annuus HOM05D000125 ORTHO05D000120 3.2e-49 199.9 252 42.5
HanXRQChr05g0144911 Helianthus annuus HOM05D000125 ORTHO05D000120 4.1e-49 199.5 322 37.3
HanXRQChr12g0356751 Helianthus annuus HOM05D000125 ORTHO05D000120 7.1e-49 198.7 326 35.9
ECA247G0507 Erigeron canadensis HOM05D000125 ORTHO05D000120 9.2e-49 198.4 238 41.6
HanXRQChr16g0499011 Helianthus annuus HOM05D000125 ORTHO05D000120 9.2e-49 198.4 351 36.2
HanXRQChr16g0499101 Helianthus annuus HOM05D000125 ORTHO05D000120 9.2e-49 198.4 329 40.1
HanXRQChr12g0358611 Helianthus annuus HOM05D000125 ORTHO05D000120 5.1e-47 192.6 331 38.7
HanXRQChr05g0131841 Helianthus annuus HOM05D000125 ORTHO05D000120 1.6e-45 187.6 367 36.5
HanXRQChr12g0356731 Helianthus annuus HOM05D000125 ORTHO05D000120 1.6e-45 187.6 326 35.9
HanXRQChr05g0131831 Helianthus annuus HOM05D000125 ORTHO05D000120 2.1e-45 187.2 373 35.9
HanXRQChr05g0131811 Helianthus annuus HOM05D000125 ORTHO05D000120 4.7e-45 186.0 370 35.4
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 3.1e-44 183.3 310 38.7
HanXRQChr13g0410801 Helianthus annuus HOM05D000125 ORTHO05D000120 5.2e-44 182.6 350 32.0
ECA247G3868 Erigeron canadensis HOM05D000125 ORTHO05D000120 2.0e-43 180.6 224 46.0
HanXRQChr02g0054471 Helianthus annuus HOM05D000125 ORTHO05D000120 1.6e-40 171.0 131 64.1
HanXRQChr14g0430571 Helianthus annuus HOM05D000125 ORTHO05D000120 3.5e-40 169.9 304 35.2
ECA247G2159 Erigeron canadensis HOM05D000125 ORTHO05D000120 3.9e-39 166.4 355 32.1
HanXRQChr16g0499091 Helianthus annuus HOM05D000125 ORTHO05D000120 8.7e-39 165.2 437 30.7
HanXRQChr13g0410771 Helianthus annuus HOM05D000125 ORTHO05D000120 4.3e-38 162.9 333 31.5
HanXRQChr02g0054691 Helianthus annuus HOM05D000125 ORTHO05D000120 1.6e-37 161.0 106 68.9
HanXRQChr05g0131481 Helianthus annuus HOM05D000125 ORTHO05D000120 3.6e-37 159.8 378 31.2
HanXRQChr12g0355681 Helianthus annuus HOM05D000125 ORTHO05D000120 1.4e-36 157.9 402 30.3
HanXRQChr14g0430591 Helianthus annuus HOM05D000125 ORTHO05D000120 1.8e-36 157.5 306 33.0
Lsat_1_v5_gn_8_64660 Lactuca sativa HOM05D000125 ORTHO05D000120 4.0e-36 156.4 192 42.7
HanXRQChr14g0430601 Helianthus annuus HOM05D000125 ORTHO05D000120 6.9e-36 155.6 302 34.4
HanXRQChr15g0467131 Helianthus annuus HOM05D000125 ORTHO05D000120 2.6e-35 153.7 299 36.1
HanXRQChr15g0467181 Helianthus annuus HOM05D000125 ORTHO05D000120 4.5e-35 152.9 297 36.4
HanXRQChr09g0267461 Helianthus annuus HOM05D000125 ORTHO05D000120 7.6e-35 152.1 351 32.2
HanXRQChr02g0054401 Helianthus annuus HOM05D000125 ORTHO05D000120 4.9e-34 149.4 81 80.2
HanXRQChr12g0358621 Helianthus annuus HOM05D000125 ORTHO05D000120 8.4e-34 148.7 327 33.3
HanXRQChr09g0267471 Helianthus annuus HOM05D000125 ORTHO05D000120 2.4e-33 147.1 300 35.3
HanXRQChr08g0209911 Helianthus annuus HOM05D000125 ORTHO05D000120 5.4e-33 146.0 294 33.0
HanXRQChr12g0359001 Helianthus annuus HOM05D000125 ORTHO05D000120 1.2e-32 144.8 322 32.6
Dinv39597 Davidia involucrata HOM05D000125 ORTHO05D000120 2.7e-32 143.7 332 31.0
Dinv12476 Davidia involucrata HOM05D000125 ORTHO05D000120 7.9e-32 142.1 356 31.5
Lj1A1122G41 Lonicera japonica HOM05D000125 ORTHO05D000120 7.9e-32 142.1 376 30.1
ECA248G2195 Erigeron canadensis HOM05D000125 ORTHO05D000120 1.3e-31 141.4 155 42.6
HanXRQChr12g0358641 Helianthus annuus HOM05D000125 ORTHO05D000120 1.9e-30 137.5 325 31.4
HanXRQChr12g0358871 Helianthus annuus HOM05D000125 ORTHO05D000120 2.5e-30 137.1 344 31.4
HanXRQChr12g0358991 Helianthus annuus HOM05D000125 ORTHO05D000120 9.6e-30 135.2 309 29.8
ECA248G3898 Erigeron canadensis HOM05D000125 ORTHO05D000120 1.1e-28 131.7 180 38.3
HanXRQChr16g0499191 Helianthus annuus HOM05D000125 ORTHO05D000120 1.1e-28 131.7 146 47.3
HanXRQChr13g0417501 Helianthus annuus HOM05D000125 ORTHO05D000120 1.8e-28 131.0 261 35.6
ECA247G0358 Erigeron canadensis HOM05D000125 ORTHO05D000120 9.0e-28 128.6 233 33.5
HanXRQChr02g0054461 Helianthus annuus HOM05D000125 ORTHO05D000120 1.2e-27 128.3 219 38.4
HanXRQChr02g0054681 Helianthus annuus HOM05D000125 ORTHO05D000120 1.1e-25 121.7 80 66.2
Lsat_1_v5_gn_8_114160 Lactuca sativa HOM05D000125 ORTHO05D000120 3.2e-25 120.2 188 37.2
ECA247G3786 Erigeron canadensis HOM05D001116 ORTHO05D001028 4.2e-25 119.8 261 30.3
HanXRQChr01g0024921 Helianthus annuus HOM05D000125 ORTHO05D000120 5.5e-25 119.4 217 36.4
Lsat_1_v5_gn_8_81021 Lactuca sativa HOM05D000125 ORTHO05D000120 3.5e-24 116.7 203 38.4
Lj1A1122T47 Lonicera japonica HOM05D000125 ORTHO05D000120 4.6e-24 116.3 334 27.5
ECA234G4526 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.8e-23 114.4 206 34.5
Dinv14263 Davidia involucrata HOM05D000125 ORTHO05D000120 3.1e-20 103.6 316 29.1
Lj1A250T9 Lonicera japonica HOM05D000125 ORTHO05D000120 9.0e-20 102.1 316 25.3
Lsat_1_v5_gn_5_140101 Lactuca sativa HOM05D000125 ORTHO05D000120 3.4e-19 100.1 98 50.0
Lj1A359T19 Lonicera japonica HOM05D000125 ORTHO05D000120 4.5e-19 99.8 324 25.9
Lsat_1_v5_gn_6_80961 Lactuca sativa HOM05D000125 ORTHO05D000120 1.0e-18 98.6 217 30.0
Dinv18125 Davidia involucrata HOM05D000125 ORTHO05D000120 2.9e-18 97.1 302 29.8
Rhsim03G0009700 Rhododendron simsii HOM05D000125 ORTHO05D000120 2.9e-18 97.1 323 26.3
QL03p007957 Quercus lobata HOM05D000125 ORTHO05D000120 4.2e-17 93.2 315 26.3
HanXRQChr05g0131781 Helianthus annuus HOM05D000125 ORTHO05D000120 7.1e-17 92.4 107 40.2
Lj1C273T1 Lonicera japonica HOM05D000125 ORTHO05D000120 1.2e-16 91.7 316 23.7
HanXRQChr17g0562041 Helianthus annuus HOM05D000125 ORTHO05D000120 1.6e-16 91.3 95 45.3
Lsat_1_v5_gn_2_82381 Lactuca sativa HOM05D000125 ORTHO05D000120 3.5e-16 90.1 229 28.8
CSS0022579 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D000120 1.0e-15 88.6 316 26.9
DCAR_012345 Daucus carota HOM05D000125 ORTHO05D000120 2.3e-15 87.4 321 27.7
Lsat_1_v5_gn_8_125040 Lactuca sativa HOM05D000125 ORTHO05D000120 8.7e-15 85.5 74 55.4
HanXRQChr01g0026471 Helianthus annuus HOM05D000125 ORTHO05D000120 1.9e-14 84.3 78 46.2
HanXRQChr05g0131791 Helianthus annuus HOM05D000125 ORTHO05D000807 7.4e-14 82.4 213 34.3
SalBow8G5208 Salvia bowleyana HOM05D000125 ORTHO05D000120 3.7e-13 80.1 309 25.2
CAN.G641.61 Capsicum annuum HOM05D000125 ORTHO05D000120 4.8e-13 79.7 213 24.9
HanXRQChr04g0096151 Helianthus annuus HOM05D000125 ORTHO05D000120 8.2e-13 79.0 61 59.0
HanXRQChr08g0209881 Helianthus annuus HOM05D000125 ORTHO05D000120 1.4e-12 78.2 129 38.0
SalBow8G2251 Salvia bowleyana HOM05D000125 ORTHO05D000120 3.1e-12 77.0 309 24.9
CSS0044617 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D000120 1.2e-11 75.1 180 31.7
COL.COLO4_14647 Corchorus olitorius HOM05D000125 ORTHO05D000120 1.2e-11 75.1 325 24.6
HanXRQChr12g0358891 Helianthus annuus HOM05D000125 ORTHO05D000120 1.2e-11 75.1 212 28.3
CSS0000936 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D000120 3.4e-11 73.6 183 30.1
DCAR_011390 Daucus carota HOM05D000125 ORTHO05D000120 3.4e-11 73.6 311 22.5
Nitab4.5_0006586g0030 Nicotiana tabacum HOM05D000125 ORTHO05D000807 1.0e-10 72.0 326 23.6
HanXRQChr12g0358931 Helianthus annuus HOM05D000125 ORTHO05D000120 1.7e-10 71.2 163 31.3
CSS0016152 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D000120 3.8e-10 70.1 316 27.2
CSS0023983 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D000120 5.0e-10 69.7 160 29.4
CAN.G322.4 Capsicum annuum HOM05D000125 ORTHO05D000120 5.0e-10 69.7 210 24.8
Actinidia09373 Actinidia chinensis HOM05D000125 ORTHO05D000120 6.5e-10 69.3 180 28.3
Lj2C375T1 Lonicera japonica HOM05D000125 ORTHO05D000120 8.5e-10 68.9 303 22.4
Prupe.7G078300 Prunus persica HOM05D000125 ORTHO05D000120 1.4e-09 68.2 205 25.4
QL01p002329 Quercus lobata HOM05D000125 ORTHO05D000120 1.9e-09 67.8 311 22.8
FvH4_6g47450 Fragaria vesca HOM05D000125 ORTHO05D000120 2.5e-09 67.4 348 24.7
COL.COLO4_14648 Corchorus olitorius HOM05D000125 ORTHO05D000120 5.5e-09 66.2 327 23.5
FvH4_7g18770 Fragaria vesca HOM05D000125 ORTHO05D000120 5.5e-09 66.2 232 26.7
CSS0034745 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D000120 7.2e-09 65.9 188 27.1
DCAR_008575 Daucus carota HOM05D000125 ORTHO05D000120 7.2e-09 65.9 234 24.8
CSS0033922 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D000120 2.1e-08 64.3 185 26.5
DCAR_008482 Daucus carota HOM05D000125 ORTHO05D000120 2.1e-08 64.3 315 24.8
FAN14G2535 Fragaria x ananassa HOM05D000125 ORTHO05D000120 2.7e-08 63.9 355 23.7
FAN14G5973 Fragaria x ananassa HOM05D000125 ORTHO05D000120 2.7e-08 63.9 355 23.7
HanXRQChr05g0131801 Helianthus annuus HOM05D000125 ORTHO05D000120 2.7e-08 63.9 138 34.1
HanXRQChr05g0131821 Helianthus annuus HOM05D000125 ORTHO05D000120 2.7e-08 63.9 138 34.1
SalBow4G2403 Salvia bowleyana HOM05D000125 ORTHO05D000120 2.7e-08 63.9 259 21.2
TWI38G1913 Tripterygium wilfordii HOM05D000125 ORTHO05D000120 2.7e-08 63.9 228 22.8
Lsat_1_v5_gn_9_31741 Lactuca sativa HOM05D000125 ORTHO05D000807 3.6e-08 63.5 56 44.6
DCAR_002663 Daucus carota HOM05D000125 ORTHO05D000120 6.1e-08 62.8 226 27.0
DCAR_008299 Daucus carota HOM05D000125 ORTHO05D000120 6.1e-08 62.8 223 25.6
DCAR_011393 Daucus carota HOM05D000125 ORTHO05D000120 6.1e-08 62.8 299 21.1
Prupe.7G074600 Prunus persica HOM05D000125 ORTHO05D000120 6.1e-08 62.8 298 22.8
TWI38G2144 Tripterygium wilfordii HOM05D000125 ORTHO05D000120 6.1e-08 62.8 232 22.4
CSS0006545 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D000120 1.0e-07 62.0 344 23.5
FvH4_6g41040 Fragaria vesca HOM05D000125 ORTHO05D000120 1.0e-07 62.0 337 24.3
Lj2P391T11 Lonicera japonica HOM05D000125 ORTHO05D000807 1.0e-07 62.0 173 28.3
RcHm_v2.0_Chr1g0362581 Rosa chinensis HOM05D000125 ORTHO05D000120 2.3e-07 60.8 214 24.8
SalBow4G0725 Salvia bowleyana HOM05D000125 ORTHO05D000120 2.3e-07 60.8 242 24.4
Haze_13574 Corylus avellana HOM05D000125 ORTHO05D000120 3.0e-07 60.5 110 30.9
FAN10G2799 Fragaria x ananassa HOM05D000125 ORTHO05D000120 3.9e-07 60.1 114 31.6
FAN14G5593 Fragaria x ananassa HOM05D000125 ORTHO05D000120 3.9e-07 60.1 211 26.1
FAN02G4577 Fragaria x ananassa HOM05D000125 ORTHO05D000120 5.1e-07 59.7 229 27.5
FAN03G1186 Fragaria x ananassa HOM05D000125 ORTHO05D000120 5.1e-07 59.7 114 31.6
Nitab4.5_0013753g0010 Nicotiana tabacum HOM05D000125 ORTHO05D000807 5.1e-07 59.7 334 21.6
FAN06G2080 Fragaria x ananassa HOM05D000125 ORTHO05D000120 6.7e-07 59.3 83 37.3
Lj1A267T27 Lonicera japonica HOM05D000125 ORTHO05D000120 8.8e-07 58.9 128 31.2
FAN01G2423 Fragaria x ananassa HOM05D000125 ORTHO05D000120 1.5e-06 58.2 114 30.7
SalBow4G2253 Salvia bowleyana HOM05D000125 ORTHO05D000120 4.3e-06 56.6 231 22.5
Haze_09060 Corylus avellana HOM05D000125 ORTHO05D000120 5.7e-06 56.2 109 28.4
Prupe.7G078800 Prunus persica HOM05D000125 ORTHO05D000120 9.7e-06 55.5 174 25.9


User provided reference genes

Program Settings