Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0199851 Helianthus annuus HOM05D002069 ORTHO05D001421 2.0e-244 848.6 413 100.0
HanXRQChr05g0159831 Helianthus annuus HOM05D002069 ORTHO05D001421 6.5e-25 119.4 75 72.0
HanXRQChr16g0507251 Helianthus annuus HOM05D002069 ORTHO05D001421 2.7e-23 114.0 161 41.0
HanXRQChr06g0167591 Helianthus annuus HOM05D002069 ORTHO05D001421 4.0e-22 110.2 275 29.5
HanXRQChr14g0449651 Helianthus annuus HOM05D002069 ORTHO05D001421 2.0e-21 107.8 295 25.4
ECA238G2168 Erigeron canadensis HOM05D002069 ORTHO05D001421 3.4e-21 107.1 255 28.2
HanXRQChr14g0445141 Helianthus annuus HOM05D002069 ORTHO05D001421 3.4e-21 107.1 275 29.1
HanXRQChr08g0209451 Helianthus annuus HOM05D002069 ORTHO05D001421 5.7e-21 106.3 144 40.3
ECA238G0948 Erigeron canadensis HOM05D002069 ORTHO05D001421 3.7e-20 103.6 428 24.5
HanXRQChr07g0191861 Helianthus annuus HOM05D002069 ORTHO05D001421 8.3e-20 102.4 146 34.9
ECA232G2184 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.4e-19 101.7 246 26.4
Lsat_1_v5_gn_0_33721 Lactuca sativa HOM05D002069 ORTHO05D001421 5.4e-19 99.8 259 26.6
HanXRQChr10g0309881 Helianthus annuus HOM05D002069 ORTHO05D001421 9.1e-19 99.0 250 26.0
ECA233G2044 Erigeron canadensis HOM05D002069 ORTHO05D001421 3.5e-18 97.1 251 27.1
HanXRQChr08g0223541 Helianthus annuus HOM05D002069 ORTHO05D001421 3.5e-18 97.1 250 26.8
Lsat_1_v5_gn_5_126901 Lactuca sativa HOM05D002069 ORTHO05D001421 3.5e-18 97.1 261 26.4
Lsat_1_v5_gn_4_27020 Lactuca sativa HOM05D002069 ORTHO05D001421 5.9e-18 96.3 373 23.9
Lsat_1_v5_gn_8_18440 Lactuca sativa HOM05D002069 ORTHO05D001421 5.9e-18 96.3 373 23.9
Lsat_1_v5_gn_9_109960 Lactuca sativa HOM05D002069 ORTHO05D001421 5.9e-18 96.3 373 23.9
Lsat_1_v5_gn_2_65260 Lactuca sativa HOM05D002069 ORTHO05D001421 7.7e-18 95.9 373 23.9
Lsat_1_v5_gn_9_46640 Lactuca sativa HOM05D002069 ORTHO05D001421 1.0e-17 95.5 261 25.7
HanXRQChr06g0185171 Helianthus annuus HOM05D010964 ORTHO05D001421 1.3e-17 95.1 262 27.9
HanXRQChr02g0051561 Helianthus annuus HOM05D010964 ORTHO05D001421 2.2e-17 94.4 262 27.9
HanXRQChr02g0033561 Helianthus annuus HOM05D010964 ORTHO05D001421 3.8e-17 93.6 262 27.9
Lsat_1_v5_gn_9_99100 Lactuca sativa HOM05D002069 ORTHO05D001421 5.0e-17 93.2 252 25.8
HanXRQChr14g0427631 Helianthus annuus HOM05D033342 ORTHO05D001421 1.5e-16 91.7 264 26.9
ECA234G4655 Erigeron canadensis HOM05D002069 ORTHO05D001421 9.5e-16 89.0 262 25.2
ECA233G0231 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.2e-15 88.6 259 28.6
ECA240G1105 Erigeron canadensis HOM05D000122 ORTHO05D001883 1.6e-15 88.2 256 28.1
ECA238G1870 Erigeron canadensis HOM05D000097 ORTHO05D001421 2.1e-15 87.8 259 28.2
ECA240G0553 Erigeron canadensis HOM05D002069 ORTHO05D001421 2.1e-15 87.8 259 28.6
ECA246G2312 Erigeron canadensis HOM05D002069 ORTHO05D001421 4.7e-15 86.7 222 29.7
DCAR_005136 Daucus carota HOM05D002069 ORTHO05D001421 6.1e-15 86.3 225 24.4
DCAR_005723 Daucus carota HOM05D002069 ORTHO05D001421 6.1e-15 86.3 225 24.4
DCAR_009831 Daucus carota HOM05D002069 ORTHO05D001421 6.1e-15 86.3 225 24.4
DCAR_032318 Daucus carota HOM05D002069 ORTHO05D001421 6.1e-15 86.3 225 24.4
ECA232G4022 Erigeron canadensis HOM05D002069 ORTHO05D001421 6.1e-15 86.3 259 28.2
DCAR_031358 Daucus carota HOM05D002069 ORTHO05D001421 8.0e-15 85.9 225 24.4
ECA248G2855 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.0e-14 85.5 252 25.8
Lsat_1_v5_gn_5_31860 Lactuca sativa HOM05D002069 ORTHO05D001421 1.0e-14 85.5 242 23.1
DCAR_018982 Daucus carota HOM05D002069 ORTHO05D001421 2.3e-14 84.3 225 24.4
ECA236G0566 Erigeron canadensis HOM05D002069 ORTHO05D001421 4.0e-14 83.6 226 27.0
DCAR_029899 Daucus carota HOM05D002069 ORTHO05D001421 5.2e-14 83.2 228 25.4
ECA246G2142 Erigeron canadensis HOM05D002069 ORTHO05D001421 6.8e-14 82.8 232 25.0
Lsat_1_v5_gn_5_176780 Lactuca sativa HOM05D005502 ORTHO05D001421 8.8e-14 82.4 246 25.6
Lsat_1_v5_gn_5_183740 Lactuca sativa HOM05D002069 ORTHO05D001421 8.8e-14 82.4 254 24.8
Lsat_1_v5_gn_6_18960 Lactuca sativa HOM05D005502 ORTHO05D001421 8.8e-14 82.4 246 25.6
Lsat_1_v5_gn_1_18321 Lactuca sativa HOM05D005502 ORTHO05D001421 1.5e-13 81.6 225 24.0
HanXRQChr14g0439041 Helianthus annuus HOM05D002069 ORTHO05D001421 2.0e-13 81.3 149 32.2
Lsat_1_v5_gn_8_44320 Lactuca sativa HOM05D005502 ORTHO05D001421 2.6e-13 80.9 249 23.7
Lsat_1_v5_gn_0_2520 Lactuca sativa HOM05D005502 ORTHO05D001421 4.4e-13 80.1 258 26.0
Lsat_1_v5_gn_5_166541 Lactuca sativa HOM05D005502 ORTHO05D001421 4.4e-13 80.1 221 24.4
Lsat_1_v5_gn_6_18980 Lactuca sativa HOM05D005502 ORTHO05D001421 4.4e-13 80.1 258 26.0
Lsat_1_v5_gn_9_19581 Lactuca sativa HOM05D005502 ORTHO05D001421 4.4e-13 80.1 258 26.0
ECA238G3097 Erigeron canadensis HOM05D002069 ORTHO05D001421 7.5e-13 79.3 248 25.8
ECA233G0561 Erigeron canadensis HOM05D002069 ORTHO05D001421 9.8e-13 79.0 235 24.3
HanXRQChr13g0412951 Helianthus annuus HOM05D002069 ORTHO05D001421 1.7e-12 78.2 146 29.5
HanXRQChr02g0052261 Helianthus annuus HOM05D002069 ORTHO05D225048 2.8e-12 77.4 54 68.5
ECA246G2341 Erigeron canadensis HOM05D002069 ORTHO05D001421 3.7e-12 77.0 231 23.8
ECA248G3838 Erigeron canadensis HOM05D000795 ORTHO05D000706 4.9e-12 76.6 187 26.2
DCAR_014911 Daucus carota HOM05D002069 ORTHO05D001421 6.3e-12 76.3 301 21.6
DCAR_029821 Daucus carota HOM05D002069 ORTHO05D001421 6.3e-12 76.3 301 21.6
Lsat_1_v5_gn_4_129501 Lactuca sativa HOM05D005502 ORTHO05D001421 6.3e-12 76.3 221 24.0
ECA233G0853 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.3e-12 75.9 256 27.7
ECA233G3341 Erigeron canadensis HOM05D002069 ORTHO05D001421 8.3e-12 75.9 254 26.8
Lsat_1_v5_gn_8_34680 Lactuca sativa HOM05D005502 ORTHO05D001421 8.3e-12 75.9 224 23.7
ECA232G0092 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.4e-11 75.1 255 25.5
SalBow8G3441 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.8e-11 74.7 263 25.1
Lsat_1_v5_gn_3_13460 Lactuca sativa HOM05D005502 ORTHO05D001421 2.4e-11 74.3 213 24.4
SalBow5G1427 Salvia bowleyana HOM05D008275 ORTHO05D009801 3.1e-11 73.9 235 27.2
DCAR_031319 Daucus carota HOM05D008184 ORTHO05D002997 4.1e-11 73.6 219 25.6
Lsat_1_v5_gn_5_69860 Lactuca sativa HOM05D005502 ORTHO05D001421 5.4e-11 73.2 198 24.2
Lsat_1_v5_gn_6_54740 Lactuca sativa HOM05D005502 ORTHO05D001421 7.0e-11 72.8 321 24.3
SGA_v2.0_scaffold309G48185 Striga asiatica HOM05D002069 ORTHO05D002997 9.2e-11 72.4 279 25.4
DCAR_011489 Daucus carota HOM05D002069 ORTHO05D001421 1.2e-10 72.0 332 23.2
HanXRQChr17g0567681 Helianthus annuus HOM05D002069 ORTHO05D001421 1.2e-10 72.0 133 31.6
DCAR_005112 Daucus carota HOM05D008184 ORTHO05D001421 1.6e-10 71.6 219 26.0
Lsat_1_v5_gn_2_135660 Lactuca sativa HOM05D005502 ORTHO05D001421 2.0e-10 71.2 223 22.0
Lsat_1_v5_gn_7_57660 Lactuca sativa HOM05D005502 ORTHO05D001421 2.0e-10 71.2 244 23.4
SalBow1G7249 Salvia bowleyana HOM05D008275 ORTHO05D009801 3.5e-10 70.5 267 23.2
SalBow5G0931 Salvia bowleyana HOM05D008275 ORTHO05D009801 3.5e-10 70.5 258 23.6
Lsat_1_v5_gn_4_60840 Lactuca sativa HOM05D005502 ORTHO05D001421 7.8e-10 69.3 227 23.8
Lsat_1_v5_gn_5_68040 Lactuca sativa HOM05D005502 ORTHO05D001421 1.0e-09 68.9 214 23.4
HanXRQChr03g0078461 Helianthus annuus HOM05D002069 ORTHO05D001421 1.3e-09 68.6 152 28.3
Lsat_1_v5_gn_6_93140 Lactuca sativa HOM05D005502 ORTHO05D001421 1.3e-09 68.6 313 23.3
DCAR_025060 Daucus carota HOM05D008184 ORTHO05D002997 1.7e-09 68.2 249 25.7
DCAR_016003 Daucus carota HOM05D002069 ORTHO05D001421 2.3e-09 67.8 148 26.4
SalBow6G0143 Salvia bowleyana HOM05D008275 ORTHO05D009801 2.3e-09 67.8 241 25.7
Lsat_1_v5_gn_2_61760 Lactuca sativa HOM05D005502 ORTHO05D001421 2.9e-09 67.4 237 24.5
Lsat_1_v5_gn_4_115680 Lactuca sativa HOM05D005502 ORTHO05D001421 2.9e-09 67.4 163 30.1
HanXRQChr03g0093031 Helianthus annuus HOM05D010964 ORTHO05D001421 5.0e-09 66.6 159 30.2
Lsat_1_v5_gn_6_86360 Lactuca sativa HOM05D005502 ORTHO05D001421 5.0e-09 66.6 156 26.3
Lsat_1_v5_gn_9_40780 Lactuca sativa HOM05D002069 ORTHO05D001421 5.0e-09 66.6 129 29.5
SalBow5G1534 Salvia bowleyana HOM05D008275 ORTHO05D009801 5.0e-09 66.6 163 29.4
ECA236G1215 Erigeron canadensis HOM05D000324 ORTHO05D001421 6.6e-09 66.2 94 35.1
HanXRQChr14g0430291 Helianthus annuus HOM05D002069 ORTHO05D001421 6.6e-09 66.2 172 27.3
Lsat_1_v5_gn_1_17860 Lactuca sativa HOM05D005502 ORTHO05D001421 6.6e-09 66.2 249 22.1
DCAR_031481 Daucus carota HOM05D002069 ORTHO05D001421 8.6e-09 65.9 294 21.1
Lsat_1_v5_gn_3_8220 Lactuca sativa HOM05D005502 ORTHO05D001421 1.1e-08 65.5 180 23.3
DCAR_024115 Daucus carota HOM05D010768 ORTHO05D010791 1.5e-08 65.1 259 23.9
SGA_v2.0_scaffold231G43467 Striga asiatica HOM05D024144 ORTHO05D009801 1.5e-08 65.1 254 23.2
Lsat_1_v5_gn_5_151480 Lactuca sativa HOM05D002069 ORTHO05D001421 2.5e-08 64.3 152 26.3
Lsat_1_v5_gn_5_55300 Lactuca sativa HOM05D005502 ORTHO05D001421 2.5e-08 64.3 200 22.5
Lsat_1_v5_gn_2_129340 Lactuca sativa HOM05D005502 ORTHO05D001421 3.3e-08 63.9 347 22.5
Lsat_1_v5_gn_9_119901 Lactuca sativa HOM05D002069 ORTHO05D001421 3.3e-08 63.9 221 27.1
AUR62018056 Chenopodium quinoa HOM05D007817 ORTHO05D010493 4.3e-08 63.5 232 22.8
EL10Ac7g17236 Beta vulgaris HOM05D002461 ORTHO05D000898 7.3e-08 62.8 225 20.9
DCAR_015559 Daucus carota HOM05D002069 ORTHO05D001421 7.3e-08 62.8 293 22.2
SalBow7G4369 Salvia bowleyana HOM05D008275 ORTHO05D009801 7.3e-08 62.8 252 25.8
AUR62008492 Chenopodium quinoa HOM05D007817 ORTHO05D010493 9.5e-08 62.4 203 25.6
SalBow8G1268 Salvia bowleyana HOM05D008275 ORTHO05D009801 9.5e-08 62.4 241 22.4
DCAR_011112 Daucus carota HOM05D008184 ORTHO05D001421 1.2e-07 62.0 333 22.8
DCAR_001085 Daucus carota HOM05D002069 ORTHO05D001421 2.8e-07 60.8 381 20.2
DCAR_001467 Daucus carota HOM05D002069 ORTHO05D001421 2.8e-07 60.8 229 21.4
DCAR_001468 Daucus carota HOM05D002069 ORTHO05D001421 2.8e-07 60.8 259 23.2
HanXRQChr13g0409311 Helianthus annuus HOM05D010964 ORTHO05D001421 2.8e-07 60.8 135 28.1
Ah.08g223530 Amaranthus hybridus HOM05D006463 ORTHO05D002997 3.6e-07 60.5 241 24.9
Lsat_1_v5_gn_2_93340 Lactuca sativa HOM05D002069 ORTHO05D001421 3.6e-07 60.5 133 24.1
DCAR_023162 Daucus carota HOM05D002069 ORTHO05D001421 6.1e-07 59.7 147 25.2
Lsat_1_v5_gn_5_181440 Lactuca sativa HOM05D005502 ORTHO05D001421 6.1e-07 59.7 191 21.5
SalBow6G1118 Salvia bowleyana HOM05D008275 ORTHO05D009801 6.1e-07 59.7 231 22.5
Ah.10g026780 Amaranthus hybridus HOM05D006463 ORTHO05D002997 8.0e-07 59.3 244 24.2
DCAR_024114 Daucus carota HOM05D002069 ORTHO05D001421 8.0e-07 59.3 229 20.1
ECA240G2901 Erigeron canadensis HOM05D002069 ORTHO05D001421 8.0e-07 59.3 131 30.5
Lsat_1_v5_gn_4_110341 Lactuca sativa HOM05D002069 ORTHO05D001421 8.0e-07 59.3 129 27.1
Lsat_1_v5_gn_4_182201 Lactuca sativa HOM05D005502 ORTHO05D001421 8.0e-07 59.3 358 24.9
Lsat_1_v5_gn_9_67100 Lactuca sativa HOM05D005502 ORTHO05D001421 8.0e-07 59.3 251 20.3
SalBow1G2281 Salvia bowleyana HOM05D008275 ORTHO05D009801 8.0e-07 59.3 249 20.5
SalBow1G7213 Salvia bowleyana HOM05D008275 ORTHO05D009801 8.0e-07 59.3 158 25.3
Ah.13g066370 Amaranthus hybridus HOM05D006463 ORTHO05D002997 1.4e-06 58.5 254 24.4
Ah.15g095990 Amaranthus hybridus HOM05D006463 ORTHO05D002997 1.4e-06 58.5 244 24.2
Ah.09g225340 Amaranthus hybridus HOM05D006463 ORTHO05D002997 1.8e-06 58.2 244 24.2
Ah.14g082230 Amaranthus hybridus HOM05D006463 ORTHO05D002997 1.8e-06 58.2 244 24.6
ECA238G0639 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.8e-06 58.2 131 31.3
Ah.05g175700 Amaranthus hybridus HOM05D006463 ORTHO05D002997 2.3e-06 57.8 244 23.8
ECA240G2781 Erigeron canadensis HOM05D000006 ORTHO05D000091 2.3e-06 57.8 133 29.3
ECA248G0796 Erigeron canadensis HOM05D000001 ORTHO05D001421 2.3e-06 57.8 234 23.1
Lsat_1_v5_gn_3_115000 Lactuca sativa HOM05D002069 ORTHO05D001421 2.3e-06 57.8 109 31.2
Ah.01g009500 Amaranthus hybridus HOM05D006463 ORTHO05D002997 3.0e-06 57.4 244 23.8
Ah.03g145400 Amaranthus hybridus HOM05D006463 ORTHO05D002997 3.0e-06 57.4 244 24.2
Ah.04g160950 Amaranthus hybridus HOM05D006463 ORTHO05D002997 4.0e-06 57.0 244 23.8
DCAR_001716 Daucus carota HOM05D002069 ORTHO05D001421 4.0e-06 57.0 97 29.9
DCAR_017202 Daucus carota HOM05D002069 ORTHO05D001421 4.0e-06 57.0 97 29.9
ECA232G1349 Erigeron canadensis HOM05D002069 ORTHO05D001421 4.0e-06 57.0 117 30.8
Lsat_1_v5_gn_4_113081 Lactuca sativa HOM05D005502 ORTHO05D001421 4.0e-06 57.0 146 24.7
Lsat_1_v5_gn_7_2960 Lactuca sativa HOM05D002069 ORTHO05D001421 4.0e-06 57.0 160 25.0
Lsat_1_v5_gn_4_177560 Lactuca sativa HOM05D002069 ORTHO05D001421 8.9e-06 55.8 320 20.6


User provided reference genes

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