Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0198421 Helianthus annuus HOM05D006577 ORTHO05D008428 1.7e-114 416.0 205 100.0
HanXRQChr07g0198411 Helianthus annuus HOM05D006577 ORTHO05D008428 4.9e-66 255.0 170 77.6
Lsat_1_v5_gn_6_17281 Lactuca sativa HOM05D006577 ORTHO05D008428 6.9e-60 234.6 180 68.3
ECA233G0973 Erigeron canadensis HOM05D006577 ORTHO05D008428 1.5e-59 233.4 177 67.8
FAN21G2299 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.9e-54 216.5 174 64.9
Peaxi162Scf00193g00730 Petunia axillaris HOM05D006577 ORTHO05D008428 4.3e-54 215.3 170 66.5
Psat1g131640 Pisum sativum HOM05D006577 ORTHO05D008428 9.7e-54 214.2 175 63.4
TPR.G29075 Trifolium pratense HOM05D006577 ORTHO05D008428 1.6e-53 213.4 175 64.0
Nitab4.5_0007095g0010 Nicotiana tabacum HOM05D006577 ORTHO05D008428 2.8e-53 212.6 176 64.8
Sopen08g024050 Solanum pennellii HOM05D006577 ORTHO05D008428 3.7e-53 212.2 175 62.9
Solyc08g075420.4 Solanum lycopersicum HOM05D006577 ORTHO05D008428 1.4e-52 210.3 176 63.1
CAN.G1026.7 Capsicum annuum HOM05D006577 ORTHO05D008428 2.4e-52 209.5 176 62.5
Cc08_g05650 Coffea canephora HOM05D006577 ORTHO05D008428 2.4e-52 209.5 180 62.8
CiPaw.11G075200 Carya illinoinensis HOM05D006577 ORTHO05D008428 3.1e-52 209.1 172 62.8
MD08G1001400 Malus domestica HOM05D006577 ORTHO05D008428 5.3e-52 208.4 177 64.4
FAN20G0322 Fragaria x ananassa HOM05D006577 ORTHO05D008428 1.2e-51 207.2 174 63.8
Prupe.1G353400 Prunus persica HOM05D006577 ORTHO05D008428 1.5e-51 206.8 183 62.3
Medtr2g040410 Medicago truncatula HOM05D006577 ORTHO05D008428 2.0e-51 206.5 174 62.6
GSVIVG01036870001 Vitis vinifera HOM05D006577 ORTHO05D008428 2.0e-51 206.5 175 62.3
FvH4_2g37380 Fragaria vesca HOM05D006577 ORTHO05D008428 3.4e-51 205.7 174 63.2
Manes.17G000100 Manihot esculenta HOM05D006577 ORTHO05D008428 4.5e-51 205.3 181 63.0
Nn7g37388 Nelumbo nucifera HOM05D006577 ORTHO05D008428 4.5e-51 205.3 173 61.3
TWI73G0063 Tripterygium wilfordii HOM05D006577 ORTHO05D008428 4.5e-51 205.3 171 63.7
arahy.Tifrunner.gnm1.ann1.0U4NMV Arachis hypogaea HOM05D006577 ORTHO05D008428 5.9e-51 204.9 180 61.7
arahy.Tifrunner.gnm1.ann1.Y0J304 Arachis hypogaea HOM05D006577 ORTHO05D008428 5.9e-51 204.9 180 61.7
Lj3A28G25 Lonicera japonica HOM05D006577 ORTHO05D008428 5.9e-51 204.9 170 64.7
Lj3A8G25 Lonicera japonica HOM05D006577 ORTHO05D008428 5.9e-51 204.9 170 64.7
Lj2g0006155 Lotus japonicus HOM05D006577 ORTHO05D008428 5.9e-51 204.9 175 61.7
Migut.E01373 Erythranthe guttata HOM05D006577 ORTHO05D008428 7.7e-51 204.5 169 64.5
COL.COLO4_11282 Corchorus olitorius HOM05D006577 ORTHO05D008428 1.0e-50 204.1 174 61.5
Thecc.03G318900 Theobroma cacao HOM05D006577 ORTHO05D008428 1.0e-50 204.1 181 61.3
TAR629G1131 Trochodendron aralioides HOM05D006577 ORTHO05D008428 1.0e-50 204.1 180 59.4
CANSAT35G0698 Cannabis sativa HOM05D006577 ORTHO05D008428 1.3e-50 203.8 174 63.2
Glyma.01G154300 Glycine max HOM05D006577 ORTHO05D008428 1.3e-50 203.8 178 60.7
RcHm_v2.0_Chr6g0304321 Rosa chinensis HOM05D006577 ORTHO05D008428 1.3e-50 203.8 174 63.2
Oeu046783.1 Olea europaea HOM05D006577 ORTHO05D008428 1.7e-50 203.4 179 60.3
MSTRG.1757 Avicennia marina HOM05D006577 ORTHO05D008428 2.2e-50 203.0 176 61.9
Ca_13135_v3 Cicer arietinum L. HOM05D006577 ORTHO05D008428 2.2e-50 203.0 175 61.7
ATR0568G043 Amborella trichopoda HOM05D006577 ORTHO05D008428 6.5e-50 201.4 204 53.9
Cfa012291 Carpinus fangiana HOM05D000435 ORTHO05D000430 6.5e-50 201.4 185 60.0
CDE01G0285 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 6.5e-50 201.4 174 60.9
Gohir.D08G170500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 6.5e-50 201.4 178 59.0
Eucgr.D02560 Eucalyptus grandis HOM05D006577 ORTHO05D008428 8.5e-50 201.1 176 60.8
PGR042G0863 Punica granatum HOM05D006577 ORTHO05D008428 8.5e-50 201.1 174 60.9
Aqoxy7G00896 Aquilegia oxysepala HOM05D006577 ORTHO05D008428 1.1e-49 200.7 169 62.7
CDE12G0431 Ceratophyllum demersum HOM05D006577 ORTHO05D008428 1.1e-49 200.7 174 60.3
Thhalv10024821m.g Eutrema salsugineum HOM05D006577 ORTHO05D008428 1.1e-49 200.7 186 57.5
Gorai.004G178000 Gossypium raimondii HOM05D006577 ORTHO05D008428 1.1e-49 200.7 178 59.6
Potri.004G236300 Populus trichocarpa HOM05D006577 ORTHO05D008428 1.1e-49 200.7 169 60.9
Gohir.A08G149500 Gossypium hirsutum HOM05D006577 ORTHO05D008428 1.4e-49 200.3 178 59.6
MELO3C010522.2 Cucumis melo HOM05D006577 ORTHO05D008428 1.9e-49 199.9 183 60.1
Glyma.11G090300 Glycine max HOM05D006577 ORTHO05D008428 1.9e-49 199.9 179 59.2
VMungo1215G3406 Vigna mungo HOM05D006577 ORTHO05D008428 2.5e-49 199.5 172 59.9
Atru.chr8.2629 Acer truncatum HOM05D006577 ORTHO05D008428 3.2e-49 199.1 170 62.9
CsaV3_4G027910 Cucumis sativus L. HOM05D006577 ORTHO05D008428 3.2e-49 199.1 183 60.1
HPP92_002488 Vanilla planifolia HOM05D006577 ORTHO05D008428 3.2e-49 199.1 177 60.5
ClCG11G016060 Citrullus lanatus HOM05D006577 ORTHO05D008428 4.2e-49 198.7 191 57.1
THA.LOC104806196 Tarenaya hassleriana HOM05D006577 ORTHO05D008428 7.2e-49 198.0 173 60.7
A01p11160 Brassica napus HOM05D006577 ORTHO05D008428 1.2e-48 197.2 178 58.4
BraA01t01062Z Brassica rapa HOM05D006577 ORTHO05D008428 1.2e-48 197.2 178 58.4
CSS0014058 Camellia sinensis var. sinensis HOM05D006577 ORTHO05D008428 1.2e-48 197.2 179 58.7
AT4G19190 Arabidopsis thaliana HOM05D006577 ORTHO05D008428 1.6e-48 196.8 185 57.8
BcaC09g51429 Brassica carinata HOM05D006577 ORTHO05D008428 1.6e-48 196.8 178 58.4
C01p13200 Brassica napus HOM05D006577 ORTHO05D008428 1.6e-48 196.8 178 58.4
Ciclev10011516m.g Citrus clementina HOM05D006577 ORTHO05D008428 2.1e-48 196.4 172 61.6
Lalb_Chr16g0380351 Lupinus albus HOM05D006577 ORTHO05D008428 2.1e-48 196.4 183 56.3
BcaC09g51430 Brassica carinata HOM05D006577 ORTHO05D008428 2.7e-48 196.1 178 58.4
unitig_37.g12910 Utricularia gibba HOM05D006577 ORTHO05D008428 2.7e-48 196.1 178 58.4
BolC1t01294H Brassica oleracea HOM05D006577 ORTHO05D008428 3.6e-48 195.7 176 59.1
Cpa.g.sc90.36 Carica papaya HOM05D006577 ORTHO05D008428 4.6e-48 195.3 188 56.4
EL10Ac8g19602 Beta vulgaris HOM05D006577 ORTHO05D008428 6.1e-48 194.9 168 60.7
CARHR226070 Cardamine hirsuta HOM05D006577 ORTHO05D008428 6.1e-48 194.9 186 57.0
Carub.0007s2195 Capsella rubella HOM05D006577 ORTHO05D008428 7.9e-48 194.5 186 54.8
Sc24g0001520 Simmondsia chinensis HOM05D006577 ORTHO05D008428 1.0e-47 194.1 157 61.8
Aa31LG6G1900 Aethionema arabicum HOM05D006577 ORTHO05D008428 1.4e-47 193.7 178 58.4
Sp7g17900 Schrenkiella parvula HOM05D006577 ORTHO05D008428 1.8e-47 193.4 178 58.4
SGA_v2.0_scaffold144G35886 Striga asiatica HOM05D006577 ORTHO05D008428 2.3e-47 193.0 200 55.0
AL7G34890 Arabidopsis lyrata HOM05D006577 ORTHO05D008428 3.9e-47 192.2 186 54.8
FAN27G1697 Fragaria x ananassa HOM05D006577 ORTHO05D008428 3.9e-47 192.2 208 54.3
vmacro00091 Vaccinium macrocarpon HOM05D006577 ORTHO05D008428 6.7e-47 191.4 171 59.1
AUR62030109 Chenopodium quinoa HOM05D006577 ORTHO05D008428 1.5e-46 190.3 169 56.8
Phvul.002G121300 Phaseolus vulgaris HOM05D006577 ORTHO05D008428 1.5e-46 190.3 175 57.1
Actinidia32789 Actinidia chinensis HOM05D006577 ORTHO05D008428 3.3e-46 189.1 187 55.1
Dinv41806 Davidia involucrata HOM05D006577 ORTHO05D008428 3.3e-46 189.1 182 57.7
Oeu015543.2 Olea europaea HOM05D006577 ORTHO05D008428 7.4e-46 188.0 210 51.9
Haze_08434 Corylus avellana HOM05D006577 ORTHO05D008428 1.7e-45 186.8 200 54.0
Rhsim11G0036700 Rhododendron simsii HOM05D006577 ORTHO05D008428 1.7e-45 186.8 173 58.4
DCAR_030906 Daucus carota HOM05D006577 ORTHO05D008428 8.2e-45 184.5 175 55.4
SMO172G0042 Selaginella moellendorffii HOM05D006577 ORTHO05D008428 3.4e-43 179.1 176 52.8
SEGI_36653 Sequoiadendron giganteum HOM05D006577 ORTHO05D008428 6.5e-42 174.9 185 50.8
PSO502G0007 Papaver somniferum HOM05D006577 ORTHO05D008428 1.9e-41 173.3 189 50.8
Pp3c3_31660 Physcomitrium patens HOM05D006577 ORTHO05D008428 3.2e-41 172.6 175 53.7
PSO675G5955 Papaver somniferum HOM05D006577 ORTHO05D008428 4.2e-41 172.2 177 52.0
Mapoly0190s0006 Marchantia polymorpha HOM05D006577 ORTHO05D008428 2.1e-40 169.9 175 53.7
Lj9P453T24 Lonicera japonica HOM05D006577 ORTHO05D008428 5.7e-38 161.8 93 80.6
Sabra01G0180600 Salix brachista HOM05D006577 ORTHO05D008428 1.7e-37 160.2 233 42.9
Sed0006082 Sechium edule HOM05D006577 ORTHO05D008428 6.3e-37 158.3 159 54.7
Zm00001eb227500 Zea mays HOM05D006577 ORTHO05D008428 7.0e-36 154.8 151 54.3
CBR_g50314 Chara braunii HOM05D006577 ORTHO05D008428 1.6e-32 143.7 191 43.5
QL12p004173 Quercus lobata HOM05D006577 ORTHO05D008428 3.5e-27 125.9 74 78.4
Hund17692 Selenicereus undatus HOM05D006577 ORTHO05D008428 6.1e-24 115.2 62 82.3
MCO15G109 Micromonas commoda HOM05D006577 ORTHO05D008428 2.3e-18 96.7 179 31.8
Hund17694 Selenicereus undatus HOM05D006577 ORTHO05D008428 2.6e-14 83.2 108 44.4
MD15G1000700 Malus domestica HOM05D006577 ORTHO05D008428 3.5e-11 72.8 117 45.3
TPR.G30154 Trifolium pratense HOM05D006577 ORTHO05D008428 4.4e-06 55.8 36 69.4


User provided reference genes

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