Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0198081 Helianthus annuus HOM05D005798 ORTHO05D007269 0.0e+00 1194.5 585 100.0
HanXRQChr07g0197891 Helianthus annuus HOM05D005798 ORTHO05D220970 3.6e-37 160.6 115 71.3
HanXRQChr16g0519531 Helianthus annuus HOM05D005798 ORTHO05D007269 6.2e-37 159.8 188 48.4
HanXRQChr12g0366931 Helianthus annuus HOM05D005798 ORTHO05D007269 4.6e-32 143.7 193 45.6
ECA234G4178 Erigeron canadensis HOM05D005798 ORTHO05D007269 1.7e-31 141.7 236 37.7
arahy.Tifrunner.gnm1.ann1.1MA0KJ Arachis hypogaea HOM05D005798 ORTHO05D007269 4.2e-25 120.6 173 40.5
arahy.Tifrunner.gnm1.ann1.6FN2NF Arachis hypogaea HOM05D005798 ORTHO05D007269 5.4e-25 120.2 173 40.5
Lj1g0019008 Lotus japonicus HOM05D005798 ORTHO05D007269 9.3e-25 119.4 283 30.0
MBI05_g22048_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 9.3e-25 119.4 224 34.4
CiPaw.13G020800 Carya illinoinensis HOM05D005798 ORTHO05D007269 1.6e-24 118.6 224 34.4
PGR004G1878 Punica granatum HOM05D005798 ORTHO05D007269 2.1e-24 118.2 205 35.6
Glyma.06G310400 Glycine max HOM05D005798 ORTHO05D007269 2.7e-24 117.9 283 31.8
PGR004G0434 Punica granatum HOM05D005798 ORTHO05D007269 2.7e-24 117.9 217 34.6
Nn1g00612 Nelumbo nucifera HOM05D005798 ORTHO05D007269 3.5e-24 117.5 198 34.8
PSO782G4885 Papaver somniferum HOM05D005798 ORTHO05D007269 6.0e-24 116.7 199 36.7
Thecc.10G001400 Theobroma cacao HOM05D005798 ORTHO05D007269 6.0e-24 116.7 197 35.5
unitig_52.g17377 Utricularia gibba HOM05D005798 ORTHO05D007269 6.0e-24 116.7 225 33.8
PSO017G1219 Papaver somniferum HOM05D005798 ORTHO05D007269 7.8e-24 116.3 199 36.7
vmacro21093 Vaccinium macrocarpon HOM05D005798 ORTHO05D007269 7.8e-24 116.3 204 37.7
Glyma.04G128400 Glycine max HOM05D005798 ORTHO05D007269 1.0e-23 115.9 282 31.9
Peaxi162Scf01124g00121 Petunia axillaris HOM05D005798 ORTHO05D007269 1.3e-23 115.5 228 33.8
Nn2g10726 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.3e-23 114.8 266 30.8
PSO063G7295 Papaver somniferum HOM05D005798 ORTHO05D007269 2.3e-23 114.8 199 36.7
MSTRG.20650 Avicennia marina HOM05D005798 ORTHO05D007269 3.0e-23 114.4 211 35.1
Gohir.A10G242600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 3.0e-23 114.4 191 37.2
Sc26g0001830 Simmondsia chinensis HOM05D005798 ORTHO05D007269 3.0e-23 114.4 244 31.1
Cpa.g.sc3387.1 Carica papaya HOM05D005798 ORTHO05D007269 3.9e-23 114.0 169 36.7
Nitab4.5_0013532g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 3.9e-23 114.0 220 32.7
Eucgr.D01150 Eucalyptus grandis HOM05D005798 ORTHO05D007269 5.1e-23 113.6 193 36.8
Lalb_Chr19g0126311 Lupinus albus HOM05D005798 ORTHO05D007269 5.1e-23 113.6 195 35.9
COL.COLO4_19318 Corchorus olitorius HOM05D005798 ORTHO05D007269 8.7e-23 112.8 197 36.0
MELO3C006251.2 Cucumis melo HOM05D005798 ORTHO05D007269 8.7e-23 112.8 194 34.0
QL04p025438 Quercus lobata HOM05D005798 ORTHO05D007269 8.7e-23 112.8 196 35.7
THA.LOC104817171 Tarenaya hassleriana HOM05D005798 ORTHO05D007269 8.7e-23 112.8 253 34.4
Ah.14g086050 Amaranthus hybridus HOM05D005798 ORTHO05D007269 1.1e-22 112.5 216 33.3
CAN.G1480.2 Capsicum annuum HOM05D005798 ORTHO05D007269 1.5e-22 112.1 228 33.3
Gohir.D10G254600 Gossypium hirsutum HOM05D005798 ORTHO05D007269 1.5e-22 112.1 192 36.5
VMungo1080G0989 Vigna mungo HOM05D005798 ORTHO05D007269 1.5e-22 112.1 283 30.0
CANSAT21G0894 Cannabis sativa HOM05D005798 ORTHO05D007269 1.9e-22 111.7 223 33.6
Ciclev10020482m.g Citrus clementina HOM05D005798 ORTHO05D007269 1.9e-22 111.7 218 36.2
ClCG05G002770 Citrullus lanatus HOM05D005798 ORTHO05D007269 2.5e-22 111.3 194 33.5
Sed0012756 Sechium edule HOM05D005798 ORTHO05D007269 3.3e-22 110.9 194 33.0
Phvul.005G016200 Phaseolus vulgaris HOM05D005798 ORTHO05D007269 5.6e-22 110.2 209 34.0
PGSC0003DMG400001703 Solanum tuberosum HOM05D005798 ORTHO05D007269 5.6e-22 110.2 228 32.9
Gorai.011G295600 Gossypium raimondii HOM05D005798 ORTHO05D007269 7.3e-22 109.8 192 35.9
Nitab4.5_0009219g0010 Nicotiana tabacum HOM05D005798 ORTHO05D007269 9.6e-22 109.4 228 32.0
Cc02_g25760 Coffea canephora HOM05D005798 ORTHO05D007269 1.3e-21 109.0 215 35.3
Duzib128G1323 Durio zibethinus HOM05D005798 ORTHO05D007269 1.3e-21 109.0 196 35.2
Potri.001G346900 Populus trichocarpa HOM05D005798 ORTHO05D007269 1.3e-21 109.0 198 34.8
Prupe.2G112300 Prunus persica HOM05D005798 ORTHO05D007269 1.3e-21 109.0 197 33.0
Sabra16G0226600 Salix brachista HOM05D005798 ORTHO05D007269 1.3e-21 109.0 198 34.8
Atru.chr5.52 Acer truncatum HOM05D005798 ORTHO05D007269 1.6e-21 108.6 216 34.7
RcHm_v2.0_Chr1g0343251 Rosa chinensis HOM05D005798 ORTHO05D007269 1.6e-21 108.6 215 35.8
Sopen01g035220 Solanum pennellii HOM05D005798 ORTHO05D007269 1.6e-21 108.6 228 32.5
TWI59G0898 Tripterygium wilfordii HOM05D005798 ORTHO05D007269 2.1e-21 108.2 214 33.2
Manes.05G060100 Manihot esculenta HOM05D005798 ORTHO05D007269 2.8e-21 107.8 284 29.9
CDE06G2636 Ceratophyllum demersum HOM05D005798 ORTHO05D007269 3.6e-21 107.5 220 29.5
Atru.chr5.24 Acer truncatum HOM05D005798 ORTHO05D007269 4.8e-21 107.1 216 34.3
EL10Ac8g19272 Beta vulgaris HOM05D005798 ORTHO05D007269 4.8e-21 107.1 214 32.2
Hund17139 Selenicereus undatus HOM05D005798 ORTHO05D007269 4.8e-21 107.1 214 34.6
AUR62027448 Chenopodium quinoa HOM05D005798 ORTHO05D007269 1.1e-20 105.9 194 33.0
CSS0042045 Camellia sinensis var. sinensis HOM05D005798 ORTHO05D007269 1.4e-20 105.5 203 33.0
Carub.0004s2713 Capsella rubella HOM05D005798 ORTHO05D007269 1.4e-20 105.5 228 30.7
AUR62031252 Chenopodium quinoa HOM05D005798 ORTHO05D007269 1.4e-20 105.5 213 31.9
Psat3g172680 Pisum sativum HOM05D005798 ORTHO05D007269 1.8e-20 105.1 231 33.3
Aa31LG1G26140 Aethionema arabicum HOM05D005798 ORTHO05D007269 3.1e-20 104.4 206 31.1
FAN28G0191 Fragaria x ananassa HOM05D005798 ORTHO05D007269 3.1e-20 104.4 221 32.6
FAN26G0835 Fragaria x ananassa HOM05D005798 ORTHO05D007269 4.0e-20 104.0 221 33.0
Medtr0103s0100 Medicago truncatula HOM05D005798 ORTHO05D007269 4.0e-20 104.0 195 35.9
Sp4g26670 Schrenkiella parvula HOM05D005798 ORTHO05D007269 5.3e-20 103.6 233 29.6
Migut.B01472 Erythranthe guttata HOM05D005798 ORTHO05D007269 6.9e-20 103.2 196 33.7
TPR.G30814 Trifolium pratense HOM05D005798 ORTHO05D007269 6.9e-20 103.2 175 36.6
Oeu024375.1 Olea europaea HOM05D005798 ORTHO05D007269 1.2e-19 102.4 208 31.7
Oeu024376.1 Olea europaea HOM05D005798 ORTHO05D007269 1.2e-19 102.4 208 31.7
FvH4_1g25731 Fragaria vesca HOM05D005798 ORTHO05D007269 1.5e-19 102.1 214 32.7
MD02G1227400 Malus domestica HOM05D005798 ORTHO05D007269 1.5e-19 102.1 234 30.8
SGA_v2.0_scaffold17G08178 Striga asiatica HOM05D005798 ORTHO05D007269 1.5e-19 102.1 187 33.2
Thhalv10001723m.g Eutrema salsugineum HOM05D005798 ORTHO05D007269 2.6e-19 101.3 233 30.5
Os05g0119600 Oryza sativa ssp. japonica HOM05D005798 ORTHO05D007269 2.6e-19 101.3 270 27.0
AT2G44580 Arabidopsis thaliana HOM05D005798 ORTHO05D007269 4.4e-19 100.5 234 29.5
FAN23G2651 Fragaria x ananassa HOM05D005798 ORTHO05D007269 4.4e-19 100.5 221 33.0
AL4G43620 Arabidopsis lyrata HOM05D005798 ORTHO05D007269 7.6e-19 99.8 228 29.8
Lj7C553T5 Lonicera japonica HOM05D005798 ORTHO05D007269 7.6e-19 99.8 162 39.5
MD07G1086000 Malus domestica HOM05D005798 ORTHO05D007269 9.9e-19 99.4 234 29.1
CARHR139800 Cardamine hirsuta HOM05D005798 ORTHO05D007269 1.3e-18 99.0 224 31.2
Ca_03850_v3 Cicer arietinum L. HOM05D005798 ORTHO05D007269 1.3e-18 99.0 194 34.5
Solyc01g088390.3 Solanum lycopersicum HOM05D005798 ORTHO05D007269 1.3e-18 99.0 196 31.6
Nn3g19112 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.2e-18 98.2 163 33.1
HPP92_011679 Vanilla planifolia HOM05D005798 ORTHO05D007269 2.9e-18 97.8 193 34.7
BolC4t22185H Brassica oleracea HOM05D005798 ORTHO05D007269 3.8e-18 97.4 237 30.4
SEGI_02869 Sequoiadendron giganteum HOM05D005798 ORTHO05D007269 3.8e-18 97.4 257 29.6
A05p04740 Brassica napus HOM05D005798 ORTHO05D007269 6.4e-18 96.7 238 30.3
BraA05t19450Z Brassica rapa HOM05D005798 ORTHO05D007269 8.4e-18 96.3 238 29.8
BcaB02g08835 Brassica carinata HOM05D005798 ORTHO05D007269 1.1e-17 95.9 241 29.9
CsaV3_3G010280 Cucumis sativus L. HOM05D005798 ORTHO05D007269 1.1e-17 95.9 155 36.8
BcaC02g12292 Brassica carinata HOM05D005798 ORTHO05D007269 1.9e-17 95.1 236 29.7
C04p05550 Brassica napus HOM05D005798 ORTHO05D007269 1.9e-17 95.1 236 29.7
Zm00001eb112030 Zea mays HOM05D005798 ORTHO05D007269 1.6e-16 92.0 194 31.4
Pp3c5_22720 Physcomitrium patens HOM05D005798 ORTHO05D007269 7.8e-16 89.7 270 29.3
AagrBONN_evm.TU.Sc2ySwM_344.2100 Anthoceros agrestis HOM05D005798 ORTHO05D007269 1.9e-14 85.1 207 30.9
Dinv43575 Davidia involucrata HOM05D005798 ORTHO05D007269 4.3e-14 84.0 166 35.5
Mapoly0001s0452 Marchantia polymorpha HOM05D005798 ORTHO05D007269 7.3e-14 83.2 248 23.8
Lsat_1_v5_gn_4_46040 Lactuca sativa HOM05D005798 ORTHO05D007269 2.8e-13 81.3 101 46.5
Actinidia33294 Actinidia chinensis HOM05D005798 ORTHO05D007269 3.6e-13 80.9 184 32.1
TAR375G0847 Trochodendron aralioides HOM05D005798 ORTHO05D007269 8.1e-13 79.7 151 38.4
Rhsim01G0145000 Rhododendron simsii HOM05D005798 ORTHO05D007269 1.4e-12 79.0 130 36.9
ATR0585G014 Amborella trichopoda HOM05D005798 ORTHO05D007269 1.8e-12 78.6 191 31.4
Atru.chr5.133 Acer truncatum HOM05D005798 ORTHO05D007269 1.2e-11 75.9 131 36.6
Nn3g19416 Nelumbo nucifera HOM05D005798 ORTHO05D007269 2.1e-08 65.1 90 37.8
CBR_g39622 Chara braunii HOM05D000017 ORTHO05D000013 3.5e-08 64.3 105 35.2
Peaxi162Scf00417g00029 Petunia axillaris HOM05D005798 ORTHO05D007269 6.0e-08 63.5 64 45.3
Actinidia21608 Actinidia chinensis HOM05D005798 ORTHO05D007269 3.0e-07 61.2 94 37.2
Nn1g07358 Nelumbo nucifera HOM05D005798 ORTHO05D007269 5.1e-07 60.5 95 41.1
Nn1g07357 Nelumbo nucifera HOM05D005798 ORTHO05D007269 4.3e-06 57.4 90 33.3
MBI14_g08084_MAGBIO Magnolia biondii HOM05D005798 ORTHO05D007269 9.6e-06 56.2 65 41.5


User provided reference genes

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