Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0196541 Helianthus annuus HOM05D005113 ORTHO05D006045 2.5e-56 221.9 112 100.0
ECA238G1367 Erigeron canadensis HOM05D005113 ORTHO05D006045 2.1e-34 149.1 110 70.9
Lsat_1_v5_gn_2_101981 Lactuca sativa HOM05D005113 ORTHO05D006045 2.7e-34 148.7 112 69.6
Dinv25078 Davidia involucrata HOM05D005113 ORTHO05D006045 4.2e-19 98.2 112 54.5
Dinv11892 Davidia involucrata HOM05D005113 ORTHO05D006045 1.6e-18 96.3 114 56.1
Cc06_g06930 Coffea canephora HOM05D005113 ORTHO05D006045 3.0e-17 92.0 105 50.5
Actinidia06192 Actinidia chinensis HOM05D005113 ORTHO05D006045 4.0e-17 91.7 104 55.8
CSS0024187 Camellia sinensis var. sinensis HOM05D005113 ORTHO05D006045 5.2e-17 91.3 100 55.0
Oeu020160.1 Olea europaea HOM05D005113 ORTHO05D006045 4.4e-16 88.2 107 51.4
Cpa.g.sc222.18 Carica papaya HOM05D005113 ORTHO05D006045 5.7e-16 87.8 119 44.5
Actinidia07952 Actinidia chinensis HOM05D005113 ORTHO05D006045 7.5e-16 87.4 116 50.0
GSVIVG01022551001 Vitis vinifera HOM05D005113 ORTHO05D006045 1.7e-15 86.3 106 50.0
Solyc01g006760.3 Solanum lycopersicum HOM05D005113 ORTHO05D006045 2.8e-15 85.5 104 48.1
Migut.L01845 Erythranthe guttata HOM05D005113 ORTHO05D006045 3.7e-15 85.1 110 50.0
PGSC0003DMG400021340 Solanum tuberosum HOM05D005113 ORTHO05D006045 6.3e-15 84.3 103 46.6
Duzib106G0847 Durio zibethinus HOM05D005113 ORTHO05D006045 1.1e-14 83.6 113 46.0
Sopen01g002760 Solanum pennellii HOM05D005113 ORTHO05D006045 1.1e-14 83.6 104 47.1
MD14G1044100 Malus domestica HOM05D005113 ORTHO05D006045 1.4e-14 83.2 116 47.4
THA.LOC104803375 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 2.4e-14 82.4 118 45.8
TAR633G2365 Trochodendron aralioides HOM05D005113 ORTHO05D006045 2.4e-14 82.4 111 45.9
MSTRG.26588 Avicennia marina HOM05D005113 ORTHO05D006045 3.1e-14 82.0 113 46.9
DCAR_009075 Daucus carota HOM05D000059 ORTHO05D012409 3.1e-14 82.0 109 44.0
MD12G1045200 Malus domestica HOM05D005113 ORTHO05D006045 3.1e-14 82.0 119 46.2
Rhsim04G0135100 Rhododendron simsii HOM05D005113 ORTHO05D006045 4.1e-14 81.6 109 47.7
Medtr7g106840 Medicago truncatula HOM05D005113 ORTHO05D006045 5.3e-14 81.3 128 42.2
Oeu044708.1 Olea europaea HOM05D005113 ORTHO05D006045 7.0e-14 80.9 104 48.1
Oeu045023.1 Olea europaea HOM05D005113 ORTHO05D006045 7.0e-14 80.9 105 46.7
FvH4_6g20940 Fragaria vesca HOM05D005113 ORTHO05D006045 1.2e-13 80.1 121 45.5
FAN14G1795 Fragaria x ananassa HOM05D005113 ORTHO05D006045 1.2e-13 80.1 121 45.5
CANSAT64G1258 Cannabis sativa HOM05D005113 ORTHO05D006045 1.6e-13 79.7 111 47.7
FAN05G0955 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.0e-13 79.3 121 43.8
FAN05G3212 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.0e-13 79.3 121 43.8
Thecc.05G109700 Theobroma cacao HOM05D005113 ORTHO05D006045 2.0e-13 79.3 114 44.7
FAN02G2823 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.7e-13 79.0 122 43.4
FAN09G1514 Fragaria x ananassa HOM05D005113 ORTHO05D006045 2.7e-13 79.0 121 43.8
Phvul.001G198200 Phaseolus vulgaris HOM05D005113 ORTHO05D006045 3.5e-13 78.6 129 37.2
Migut.J00732 Erythranthe guttata HOM05D005113 ORTHO05D006045 4.5e-13 78.2 113 45.1
DCAR_020680 Daucus carota HOM05D005113 ORTHO05D006045 5.9e-13 77.8 104 45.2
Gohir.A11G315200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 5.9e-13 77.8 119 42.0
RcHm_v2.0_Chr3g0477281 Rosa chinensis HOM05D005113 ORTHO05D006045 5.9e-13 77.8 120 43.3
TWI53G1462 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 1.0e-12 77.0 116 41.4
Atru.chr8.1293 Acer truncatum HOM05D005113 ORTHO05D006045 1.3e-12 76.6 116 44.0
Manes.08G036800 Manihot esculenta HOM05D005113 ORTHO05D006045 1.7e-12 76.3 105 42.9
TWI74G1336 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 2.9e-12 75.5 111 41.4
Gorai.006G147100 Gossypium raimondii HOM05D005113 ORTHO05D006045 3.8e-12 75.1 118 41.5
PGSC0003DMG400028226 Solanum tuberosum HOM05D009103 ORTHO05D010883 3.8e-12 75.1 100 44.0
Psat3g027480 Pisum sativum HOM05D005113 ORTHO05D006045 5.0e-12 74.7 134 38.1
Gohir.D09G128500 Gossypium hirsutum HOM05D005113 ORTHO05D006045 8.5e-12 73.9 118 39.0
Solyc10g081690.1 Solanum lycopersicum HOM05D005113 ORTHO05D006045 1.9e-11 72.8 107 41.1
CiPaw.10G020600 Carya illinoinensis HOM05D005113 ORTHO05D006045 2.5e-11 72.4 55 67.3
Manes.09G042200 Manihot esculenta HOM05D005113 ORTHO05D006045 2.5e-11 72.4 103 43.7
Sopen10g032200 Solanum pennellii HOM05D005113 ORTHO05D006045 2.5e-11 72.4 107 41.1
PSO384G2214 Papaver somniferum HOM05D005113 ORTHO05D006045 3.2e-11 72.0 116 41.4
Lalb_Chr20g0111221 Lupinus albus HOM05D005113 ORTHO05D006045 4.2e-11 71.6 128 39.8
Aqoxy1G00593 Aquilegia oxysepala HOM05D005113 ORTHO05D006045 5.5e-11 71.2 110 40.0
Lj1g0007298 Lotus japonicus HOM05D005113 ORTHO05D006045 7.2e-11 70.9 129 36.4
Peaxi162Scf00203g00418 Petunia axillaris HOM05D005113 ORTHO05D006045 7.2e-11 70.9 100 41.0
CiPaw.09G023700 Carya illinoinensis HOM05D005113 ORTHO05D006045 9.4e-11 70.5 76 50.0
Duzib093G2033 Durio zibethinus HOM05D005113 ORTHO05D006045 9.4e-11 70.5 55 65.5
Sabra16G0067600 Salix brachista HOM05D005113 ORTHO05D006045 1.2e-10 70.1 106 40.6
arahy.Tifrunner.gnm1.ann1.HSX17H Arachis hypogaea HOM05D005113 ORTHO05D006045 1.6e-10 69.7 108 39.8
Ciclev10013205m.g Citrus clementina HOM05D005113 ORTHO05D006045 1.6e-10 69.7 54 68.5
PSO339G6075 Papaver somniferum HOM05D005113 ORTHO05D006045 1.6e-10 69.7 62 61.3
TPR.G34441 Trifolium pratense HOM05D005113 ORTHO05D006045 1.6e-10 69.7 129 38.8
Gohir.D11G332200 Gossypium hirsutum HOM05D005113 ORTHO05D006045 2.1e-10 69.3 116 39.7
Glyma.19G202000 Glycine max HOM05D005113 ORTHO05D006045 2.7e-10 68.9 132 34.8
PGR142G0458 Punica granatum HOM05D005113 ORTHO05D006045 2.7e-10 68.9 102 43.1
MBI05_g03323_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 3.6e-10 68.6 108 39.8
Nitab4.5_0000721g0120 Nicotiana tabacum HOM05D005113 ORTHO05D006045 4.7e-10 68.2 104 42.3
Glyma.10G086500 Glycine max HOM05D005113 ORTHO05D006045 6.1e-10 67.8 115 40.0
Lalb_Chr25g0287851 Lupinus albus HOM05D005113 ORTHO05D006045 6.1e-10 67.8 124 39.5
QL07p026499 Quercus lobata HOM05D005113 ORTHO05D006045 6.1e-10 67.8 64 57.8
Haze_07788 Corylus avellana HOM05D005113 ORTHO05D006045 8.0e-10 67.4 67 55.2
arahy.Tifrunner.gnm1.ann1.7K7EQP Arachis hypogaea HOM05D005113 ORTHO05D006045 1.4e-09 66.6 125 37.6
Haze_20118 Corylus avellana HOM05D005113 ORTHO05D006045 1.4e-09 66.6 68 54.4
arahy.Tifrunner.gnm1.ann1.TS08QV Arachis hypogaea HOM05D005113 ORTHO05D006045 2.3e-09 65.9 119 39.5
Potri.016G066200 Populus trichocarpa HOM05D005113 ORTHO05D006045 2.3e-09 65.9 53 62.3
THA.LOC104803378 Tarenaya hassleriana HOM05D005113 ORTHO05D006045 2.3e-09 65.9 59 66.1
AUR62036329 Chenopodium quinoa HOM05D005113 ORTHO05D006045 4.0e-09 65.1 50 64.0
Nn1g06541 Nelumbo nucifera HOM05D005113 ORTHO05D006045 4.0e-09 65.1 114 38.6
arahy.Tifrunner.gnm1.ann1.I8YMJK Arachis hypogaea HOM05D005113 ORTHO05D006045 5.2e-09 64.7 119 36.1
Glyma.02G187500 Glycine max HOM05D005113 ORTHO05D006045 5.2e-09 64.7 115 36.5
Potri.006G200000 Populus trichocarpa HOM05D005113 ORTHO05D006045 5.2e-09 64.7 53 66.0
TAR623G1290 Trochodendron aralioides HOM05D005113 ORTHO05D006045 5.2e-09 64.7 54 64.8
AUR62038432 Chenopodium quinoa HOM05D005113 ORTHO05D006045 6.8e-09 64.3 90 45.6
TWI77G0719 Tripterygium wilfordii HOM05D005113 ORTHO05D006045 6.8e-09 64.3 52 59.6
Cfa019390 Carpinus fangiana HOM05D005113 ORTHO05D006045 1.5e-08 63.2 68 52.9
Nn2g14410 Nelumbo nucifera HOM05D005113 ORTHO05D006045 1.5e-08 63.2 116 37.9
Sabra06G0153800 Salix brachista HOM05D005113 ORTHO05D006045 1.5e-08 63.2 53 66.0
CARHR162120 Cardamine hirsuta HOM05D005113 ORTHO05D006045 2.0e-08 62.8 89 44.9
Prupe.7G090200 Prunus persica HOM05D005113 ORTHO05D006045 2.0e-08 62.8 105 44.8
AT3G52360 Arabidopsis thaliana HOM05D005113 ORTHO05D006045 2.6e-08 62.4 89 44.9
Gorai.007G363100 Gossypium raimondii HOM05D005113 ORTHO05D006045 4.4e-08 61.6 53 60.4
TAR369G1050 Trochodendron aralioides HOM05D005113 ORTHO05D006045 4.4e-08 61.6 50 66.0
Aa31LG10G7390 Aethionema arabicum HOM05D005113 ORTHO05D006045 7.5e-08 60.8 91 42.9
Carub.0005s1871 Capsella rubella HOM05D005113 ORTHO05D006045 7.5e-08 60.8 59 59.3
Thhalv10010863m.g Eutrema salsugineum HOM05D005113 ORTHO05D006045 7.5e-08 60.8 88 43.2
Sp5g09930 Schrenkiella parvula HOM05D005113 ORTHO05D006045 7.5e-08 60.8 88 43.2
AL5G33010 Arabidopsis lyrata HOM05D005113 ORTHO05D006045 9.8e-08 60.5 89 43.8
BcaB02g08576 Brassica carinata HOM05D005113 ORTHO05D006045 1.3e-07 60.1 88 43.2
BcaC02g09265 Brassica carinata HOM05D005113 ORTHO05D006045 1.3e-07 60.1 88 43.2
A04p07080 Brassica napus HOM05D005113 ORTHO05D006045 1.3e-07 60.1 88 43.2
C04p40660 Brassica napus HOM05D005113 ORTHO05D006045 1.3e-07 60.1 88 43.2
BolC4t25648H Brassica oleracea HOM05D005113 ORTHO05D006045 1.3e-07 60.1 88 43.2
BraA04t16405Z Brassica rapa HOM05D005113 ORTHO05D006045 1.3e-07 60.1 88 43.2
VMungo0720G0986 Vigna mungo HOM05D005113 ORTHO05D006045 1.3e-07 60.1 112 36.6
CARHR130110 Cardamine hirsuta HOM05D005113 ORTHO05D006045 2.2e-07 59.3 58 53.4
Sp4g18110 Schrenkiella parvula HOM05D005113 ORTHO05D006045 2.2e-07 59.3 41 65.9
BcaC07g39601 Brassica carinata HOM05D005113 ORTHO05D006045 2.8e-07 58.9 89 41.6
A09p45370 Brassica napus HOM05D005113 ORTHO05D006045 2.8e-07 58.9 89 41.6
C08p27550 Brassica napus HOM05D005113 ORTHO05D006045 2.8e-07 58.9 89 41.6
BolC8t50376H Brassica oleracea HOM05D005113 ORTHO05D006045 2.8e-07 58.9 89 41.6
BraA09t40001Z Brassica rapa HOM05D005113 ORTHO05D006045 2.8e-07 58.9 89 41.6
BcaB01g00380 Brassica carinata HOM05D005113 ORTHO05D006045 4.8e-07 58.2 89 41.6
AL4G31960 Arabidopsis lyrata HOM05D005113 ORTHO05D006045 8.3e-07 57.4 60 55.0
MBI11_g26202_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 8.3e-07 57.4 114 33.3
MBI11_g46321_MAGBIO Magnolia biondii HOM05D005113 ORTHO05D006045 8.3e-07 57.4 114 33.3
C04p64840 Brassica napus HOM05D005113 ORTHO05D006045 2.4e-06 55.8 88 42.0
Gohir.D04G093000 Gossypium hirsutum HOM05D005113 ORTHO05D006045 2.4e-06 55.8 52 55.8
PSO384G1750 Papaver somniferum HOM05D005113 ORTHO05D006045 2.4e-06 55.8 114 36.0
Phvul.007G265600 Phaseolus vulgaris HOM05D005113 ORTHO05D006045 2.4e-06 55.8 116 33.6
HPP92_013935 Vanilla planifolia HOM05D005113 ORTHO05D006045 2.4e-06 55.8 49 63.3
Carub.0004s1761 Capsella rubella HOM05D005113 ORTHO05D006045 4.1e-06 55.1 59 52.5
HPP92_012153 Vanilla planifolia HOM05D005113 ORTHO05D006045 4.1e-06 55.1 74 44.6


User provided reference genes

Program Settings