Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0192371 Helianthus annuus HOM05D007467 ORTHO05D009441 3.2e-127 458.8 288 100.0
Lsat_1_v5_gn_6_10100 Lactuca sativa HOM05D007467 ORTHO05D009441 4.5e-89 332.0 283 68.9
ECA233G1457 Erigeron canadensis HOM05D007467 ORTHO05D009441 2.7e-86 322.8 312 72.1
CSS0030138 Camellia sinensis var. sinensis HOM05D007467 ORTHO05D009441 2.8e-67 259.6 314 60.2
CAN.G567.94 Capsicum annuum HOM05D007467 ORTHO05D009441 1.1e-66 257.7 295 59.7
Peaxi162Scf00074g00113 Petunia axillaris HOM05D007467 ORTHO05D009441 1.8e-66 256.9 312 59.0
FAN04G1879 Fragaria x ananassa HOM05D007467 ORTHO05D009441 3.1e-66 256.1 309 57.9
RcHm_v2.0_Chr7g0187371 Rosa chinensis HOM05D007467 ORTHO05D009441 5.3e-66 255.4 287 58.2
FvH4_5g10770 Fragaria vesca HOM05D007467 ORTHO05D009441 4.5e-65 252.3 293 58.7
FAN18G0937 Fragaria x ananassa HOM05D007467 ORTHO05D009441 4.5e-65 252.3 293 58.7
FAN08G2920 Fragaria x ananassa HOM05D007467 ORTHO05D009441 1.0e-64 251.1 293 58.7
FAN13G1608 Fragaria x ananassa HOM05D007467 ORTHO05D009441 2.2e-64 250.0 299 58.2
DCAR_006558 Daucus carota HOM05D007467 ORTHO05D009441 5.0e-64 248.8 321 49.5
PGSC0003DMG400012234 Solanum tuberosum HOM05D007467 ORTHO05D009441 2.7e-62 243.0 290 56.9
MSTRG.13707 Avicennia marina HOM05D007467 ORTHO05D009441 3.6e-62 242.7 313 56.9
Oeu013372.1 Olea europaea HOM05D007467 ORTHO05D009441 1.0e-61 241.1 312 55.4
Duzib205G1912 Durio zibethinus HOM05D007467 ORTHO05D009441 1.8e-61 240.4 339 53.7
Thecc.03G219300 Theobroma cacao HOM05D007467 ORTHO05D009441 3.9e-61 239.2 336 56.0
Duzib084G1076 Durio zibethinus HOM05D007467 ORTHO05D009441 5.2e-61 238.8 321 48.6
Potri.001G082600 Populus trichocarpa HOM05D007467 ORTHO05D009441 1.3e-59 234.2 332 53.3
Sabra01G0059300 Salix brachista HOM05D007467 ORTHO05D009441 2.8e-59 233.0 334 53.3
Nn1g00417 Nelumbo nucifera HOM05D007467 ORTHO05D009441 3.7e-59 232.6 327 50.2
Prupe.5G131500 Prunus persica HOM05D007467 ORTHO05D009441 3.7e-59 232.6 356 52.0
MD14G1137500 Malus domestica HOM05D007467 ORTHO05D009441 1.4e-58 230.7 333 45.6
Dinv18747 Davidia involucrata HOM05D007467 ORTHO05D009441 5.3e-58 228.8 256 62.5
MD06G1120900 Malus domestica HOM05D007467 ORTHO05D009441 5.3e-58 228.8 335 50.1
Manes.02G001700 Manihot esculenta HOM05D007467 ORTHO05D009441 1.2e-57 227.6 308 51.6
Lj2P155T22 Lonicera japonica HOM05D007467 ORTHO05D009441 1.6e-57 227.3 283 60.1
Atru.chr9.1852 Acer truncatum HOM05D007467 ORTHO05D009441 2.6e-57 226.5 319 55.5
Ciclev10020958m.g Citrus clementina HOM05D007467 ORTHO05D009441 2.9e-56 223.0 348 52.0
Cfa011912 Carpinus fangiana HOM05D007467 ORTHO05D009441 1.9e-55 220.3 329 55.0
Sabra03G0107500 Salix brachista HOM05D007467 ORTHO05D009441 4.2e-55 219.2 321 52.3
Gohir.A12G240800 Gossypium hirsutum HOM05D007467 ORTHO05D009441 5.5e-55 218.8 297 48.5
QL02p027667 Quercus lobata HOM05D007467 ORTHO05D009441 7.2e-55 218.4 342 50.0
Cc08_g16860 Coffea canephora HOM05D007467 ORTHO05D009441 1.6e-54 217.2 276 56.2
Oeu042839.1 Olea europaea HOM05D007467 ORTHO05D009441 1.6e-54 217.2 323 52.3
Haze_09186 Corylus avellana HOM05D007467 ORTHO05D009441 1.0e-53 214.5 330 55.2
Gohir.D12G242100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 1.0e-53 214.5 299 47.2
Gorai.008G259400 Gossypium raimondii HOM05D007467 ORTHO05D009441 1.8e-53 213.8 293 49.1
Hma1.2p1_0456F.1_g156740 Hydrangea macrophylla HOM05D007467 ORTHO05D009441 3.0e-53 213.0 298 51.7
TAR636G1420 Trochodendron aralioides HOM05D007467 ORTHO05D009441 1.5e-52 210.7 282 50.0
TAR629G1879 Trochodendron aralioides HOM05D007467 ORTHO05D009441 4.4e-52 209.1 303 55.4
GSVIVG01019666001 Vitis vinifera HOM05D007467 ORTHO05D009441 1.3e-51 207.6 211 70.6
Aqoxy7G00009 Aquilegia oxysepala HOM05D007467 ORTHO05D009441 2.2e-51 206.8 301 52.5
CANSAT21G0614 Cannabis sativa HOM05D007467 ORTHO05D009441 2.2e-51 206.8 324 52.2
COL.COLO4_10812 Corchorus olitorius HOM05D007467 ORTHO05D009441 4.1e-50 202.6 209 58.4
CiPaw.11G111200 Carya illinoinensis HOM05D007467 ORTHO05D009441 1.7e-48 197.2 209 67.9
Sopen08g031410 Solanum pennellii HOM05D007467 ORTHO05D009441 3.8e-48 196.1 270 54.4
Solyc08g083220.1 Solanum lycopersicum HOM05D007467 ORTHO05D009441 3.2e-47 193.0 269 55.0
TWI60G0745 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 1.6e-46 190.7 355 48.7
Rhsim02G0253000 Rhododendron simsii HOM05D007467 ORTHO05D009441 2.1e-46 190.3 252 56.7
vmacro11497 Vaccinium macrocarpon HOM05D007467 ORTHO05D009441 1.0e-45 188.0 254 57.5
Nitab4.5_0008141g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 4.0e-45 186.0 243 60.1
Eucgr.E01052 Eucalyptus grandis HOM05D007467 ORTHO05D009441 1.2e-44 184.5 375 48.8
Nitab4.5_0002720g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 5.7e-44 182.2 243 59.3
TWI15G0957 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 5.7e-44 182.2 359 43.5
Aa31LG2G1740 Aethionema arabicum HOM05D007467 ORTHO05D009441 9.8e-44 181.4 273 49.1
Potri.003G147900 Populus trichocarpa HOM05D007467 ORTHO05D009441 3.7e-43 179.5 261 54.0
PGR042G1595 Punica granatum HOM05D007467 ORTHO05D009441 3.7e-43 179.5 333 48.3
CARHR046220 Cardamine hirsuta HOM05D007467 ORTHO05D009441 7.7e-41 171.8 270 43.0
SGA_v2.0_scaffold267G46175 Striga asiatica HOM05D007467 ORTHO05D009441 1.7e-40 170.6 282 46.8
Gorai.006G205400 Gossypium raimondii HOM05D007467 ORTHO05D009441 3.8e-40 169.5 279 52.0
Gohir.D09G183100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 1.1e-39 167.9 279 51.6
BcaC04g22507 Brassica carinata HOM05D007467 ORTHO05D009441 1.6e-38 164.1 271 46.5
Gohir.A09G188250 Gossypium hirsutum HOM05D007467 ORTHO05D009441 1.6e-38 164.1 276 50.4
CsaV3_5G001620 Cucumis sativus L. HOM05D007467 ORTHO05D009441 2.8e-38 163.3 315 49.8
MBI04_g15581_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 1.0e-37 161.4 201 49.3
MBI04_g43054_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 1.0e-37 161.4 201 49.3
MELO3C005789.2 Cucumis melo HOM05D007467 ORTHO05D009441 3.0e-37 159.8 325 48.9
Nn3g18852 Nelumbo nucifera HOM05D007467 ORTHO05D009441 2.6e-36 156.8 300 47.3
Sed0003485 Sechium edule HOM05D007467 ORTHO05D009441 4.4e-36 156.0 301 46.8
PSO478G5135 Papaver somniferum HOM05D007467 ORTHO05D009441 7.5e-36 155.2 302 44.7
MBI12_g21574_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 1.3e-35 154.5 289 48.8
Thhalv10023631m.g Eutrema salsugineum HOM05D007467 ORTHO05D009441 3.1e-34 149.8 265 40.4
PSO782G5165 Papaver somniferum HOM05D007467 ORTHO05D009441 3.1e-34 149.8 298 45.0
Sp2g00870 Schrenkiella parvula HOM05D007467 ORTHO05D009441 1.6e-33 147.5 259 45.6
ClCG01G001480 Citrullus lanatus HOM05D007467 ORTHO05D009441 3.5e-33 146.4 251 48.2
Carub.0002s0004 Capsella rubella HOM05D007467 ORTHO05D009441 5.9e-33 145.6 269 46.1
C09p18550 Brassica napus HOM05D007467 ORTHO05D009441 8.6e-32 141.7 271 42.8
BolC9t54751H Brassica oleracea HOM05D007467 ORTHO05D009441 8.6e-32 141.7 271 42.8
A09p15270 Brassica napus HOM05D007467 ORTHO05D009441 1.1e-31 141.4 281 43.4
BraA09t37173Z Brassica rapa HOM05D007467 ORTHO05D009441 1.1e-31 141.4 281 43.4
BcaB07g31413 Brassica carinata HOM05D007467 ORTHO05D009441 1.1e-26 124.8 282 40.4
THA.LOC104823626 Tarenaya hassleriana HOM05D007467 ORTHO05D009441 1.6e-25 120.9 225 45.3
AT1G64690 Arabidopsis thaliana HOM05D007467 ORTHO05D009441 1.0e-24 118.2 268 42.9
AL2G10070 Arabidopsis lyrata HOM05D007467 ORTHO05D009441 1.7e-24 117.5 268 43.7
Oeu022032.1 Olea europaea HOM05D007467 ORTHO05D009441 5.0e-24 115.9 140 55.0
CDE02G3312 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 6.6e-24 115.5 224 40.6
AUR62007067 Chenopodium quinoa HOM05D007467 ORTHO05D009441 1.6e-22 110.9 241 37.3
AUR62019932 Chenopodium quinoa HOM05D007467 ORTHO05D009441 1.7e-19 100.9 247 35.2
Zm00001eb023700 Zea mays HOM05D007467 ORTHO05D009441 3.7e-19 99.8 286 36.4
EL10Ac5g12411 Beta vulgaris HOM05D007467 ORTHO05D009441 1.1e-18 98.2 194 39.7
PGSC0003DMG400013732 Solanum tuberosum HOM05D007467 ORTHO05D009441 1.0e-16 91.7 135 43.0
ATR0579G156 Amborella trichopoda HOM05D007467 ORTHO05D009441 1.7e-16 90.9 273 31.1
Actinidia22211 Actinidia chinensis HOM05D007467 ORTHO05D009441 3.3e-15 86.7 101 52.5
Ah.12g053280 Amaranthus hybridus HOM05D007467 ORTHO05D009441 2.8e-14 83.6 322 30.7
ClCG00G001110 Citrullus lanatus HOM05D007467 ORTHO05D009441 3.6e-14 83.2 147 53.1
CDE11G0649 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 3.4e-12 76.6 200 34.5
Os10g0562600 Oryza sativa ssp. japonica HOM05D007467 ORTHO05D009441 7.1e-10 68.9 156 36.5
BcaB07g31547 Brassica carinata HOM05D007467 ORTHO05D009441 3.5e-09 66.6 149 36.2
Dinv40752 Davidia involucrata HOM05D002166 ORTHO05D002634 6.6e-08 62.4 109 42.2
Sed0003279 Sechium edule HOM05D002166 ORTHO05D002634 9.5e-07 58.5 237 24.9
Pp3c18_10070 Physcomitrium patens HOM05D002166 ORTHO05D002634 6.2e-06 55.8 133 39.8


User provided reference genes

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