Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 9.9e-170 600.1 325 100.0
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 2.1e-111 406.4 302 75.5
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 3.5e-106 389.0 255 83.1
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 1.7e-89 333.6 307 62.5
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 2.6e-85 319.7 322 58.7
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 2.6e-85 319.7 327 57.8
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 1.3e-84 317.4 328 57.9
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 2.2e-84 316.6 335 56.7
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 6.4e-84 315.1 253 66.8
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 6.4e-84 315.1 324 56.8
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 8.3e-84 314.7 242 68.6
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 1.1e-83 314.3 308 59.4
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 1.4e-83 313.9 308 59.4
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 2.4e-83 313.2 324 58.3
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 2.4e-83 313.2 320 58.8
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 7.1e-83 311.6 330 58.2
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 1.6e-82 310.5 322 58.1
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 3.5e-82 309.3 325 57.5
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 1.5e-80 303.9 327 56.3
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 1.5e-80 303.9 310 59.0
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 1.9e-80 303.5 324 54.6
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 2.5e-80 303.1 336 55.7
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 2.5e-80 303.1 329 55.3
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 3.3e-80 302.8 331 53.8
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 4.3e-80 302.4 251 66.5
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 7.3e-80 301.6 332 52.7
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 1.6e-79 300.4 306 55.9
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 8.1e-79 298.1 255 62.4
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 8.1e-79 298.1 243 66.7
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 1.1e-78 297.7 331 53.2
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 2.6e-77 293.1 323 53.9
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 2.6e-77 293.1 330 53.9
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 1.3e-76 290.8 370 50.0
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 2.4e-75 286.6 327 52.9
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 7.1e-75 285.0 315 53.7
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 6.0e-74 282.0 260 58.8
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 2.3e-73 280.0 241 63.5
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 1.9e-72 276.9 332 51.2
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 2.1e-71 273.5 281 58.4
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 2.1e-71 273.5 309 53.1
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 2.1e-71 273.5 328 53.7
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 1.1e-70 271.2 327 50.5
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 1.4e-70 270.8 246 59.8
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 1.4e-70 270.8 290 53.4
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 2.6e-69 266.5 283 55.1
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 3.4e-69 266.2 273 53.8
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 7.6e-69 265.0 325 49.5
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 7.6e-69 265.0 275 57.8
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 2.2e-68 263.5 289 52.2
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 2.2e-68 263.5 299 52.2
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.9e-67 260.4 321 51.4
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 2.4e-67 260.0 307 52.1
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 3.2e-67 259.6 258 57.0
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 3.2e-67 259.6 258 56.6
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 3.2e-67 259.6 299 50.2
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 9.3e-67 258.1 269 55.0
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 1.6e-66 257.3 311 48.9
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 2.1e-66 256.9 305 50.5
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 6.0e-66 255.4 307 49.8
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 7.8e-66 255.0 318 49.4
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 7.8e-66 255.0 342 46.2
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 1.0e-65 254.6 283 53.4
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.3e-65 254.2 327 50.2
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 1.7e-65 253.8 328 49.1
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 1.7e-65 253.8 293 51.9
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 3.0e-65 253.1 306 49.3
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 8.7e-65 251.5 331 49.2
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 8.7e-65 251.5 306 51.0
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.1e-64 251.1 306 50.7
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 1.9e-64 250.4 316 48.1
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 5.6e-64 248.8 316 48.1
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 5.6e-64 248.8 316 48.1
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 5.6e-64 248.8 316 48.1
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 5.6e-64 248.8 247 55.9
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 2.8e-63 246.5 316 47.8
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 1.8e-62 243.8 263 52.5
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 2.4e-62 243.4 311 46.3
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 4.0e-62 242.7 255 52.5
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 1.2e-61 241.1 311 46.9
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 7.6e-61 238.4 258 55.8
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 1.4e-59 234.2 251 51.8
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 1.9e-59 233.8 276 50.0
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 1.9e-59 233.8 256 51.2
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 2.4e-59 233.4 290 48.6
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 2.4e-59 233.4 291 49.5
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 9.3e-59 231.5 252 52.0
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 1.2e-58 231.1 241 53.1
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 1.6e-58 230.7 303 46.9
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 3.0e-57 226.5 322 47.2
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 5.1e-57 225.7 322 47.2
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 6.7e-57 225.3 321 45.8
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 1.5e-56 224.2 257 54.9
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 1.9e-56 223.8 261 53.3
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 1.1e-54 218.0 314 49.0
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 4.2e-51 206.1 288 47.2
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 4.6e-50 202.6 290 44.1
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 1.3e-49 201.1 250 48.8
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 1.4e-46 191.0 289 44.6
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 4.9e-44 182.6 226 47.8
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 1.8e-41 174.1 180 51.7
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 5.1e-41 172.6 263 46.8
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 3.1e-38 163.3 190 48.4
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 5.3e-38 162.5 287 43.9
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 2.9e-36 156.8 241 42.7
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 6.5e-36 155.6 305 39.7
Aqoxy5G04252 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 3.9e-33 146.4 147 56.5
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 2.2e-31 140.6 221 39.8
Cpa.g.sc175.18 Carica papaya HOM05D006904 ORTHO05D008439 1.1e-30 138.3 167 49.7
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 5.0e-28 129.4 116 62.1
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 1.8e-25 120.9 268 35.4
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 3.8e-20 103.2 225 33.8
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 1.9e-19 100.9 138 40.6
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 1.1e-16 91.7 285 30.9
QL02p029244 Quercus lobata HOM05D006904 ORTHO05D008439 2.6e-16 90.5 136 44.9
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 9.7e-16 88.6 227 29.1
BcaC09g50913 Brassica carinata HOM05D006904 ORTHO05D008439 7.0e-14 82.4 143 43.4
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 9.1e-14 82.0 313 30.4
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 1.0e-09 68.6 253 31.2
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 6.7e-09 65.9 58 55.2
Aa31LG6G7320 Aethionema arabicum HOM05D003846 ORTHO05D004726 1.4e-06 58.2 130 35.4
PRCOL_00003382 Prasinoderma coloniale HOM05D006904 ORTHO05D008439 9.1e-06 55.5 89 39.3


User provided reference genes

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