Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0192051 Helianthus annuus HOM05D007700 ORTHO05D009669 7.7e-142 508.1 489 100.0
Lsat_1_v5_gn_2_74520 Lactuca sativa HOM05D007700 ORTHO05D009669 1.5e-81 307.8 278 60.4
Lj2P490T20 Lonicera japonica HOM05D007700 ORTHO05D009669 8.5e-64 248.8 270 53.3
Sopen02g027760 Solanum pennellii HOM05D007700 ORTHO05D009669 1.0e-61 241.9 271 51.3
PGSC0003DMG400040241 Solanum tuberosum HOM05D007700 ORTHO05D009669 5.7e-60 236.1 271 50.9
Actinidia22918 Actinidia chinensis HOM05D007700 ORTHO05D009669 5.3e-58 229.6 270 48.9
Cc00_g14260 Coffea canephora HOM05D007700 ORTHO05D009669 6.9e-58 229.2 271 49.1
Lj3g0022870 Lotus japonicus HOM05D007700 ORTHO05D009669 7.7e-57 225.7 274 48.9
vmacro20514 Vaccinium macrocarpon HOM05D007700 ORTHO05D009669 2.9e-56 223.8 278 52.9
QL06p052538 Quercus lobata HOM05D007700 ORTHO05D009669 5.5e-55 219.5 276 48.2
Thecc.01G008500 Theobroma cacao HOM05D007700 ORTHO05D009669 5.5e-55 219.5 268 48.1
Rhsim10G0203000 Rhododendron simsii HOM05D000242 ORTHO05D009669 6.7e-53 212.6 252 51.2
CANSAT25G3310 Cannabis sativa HOM05D007700 ORTHO05D009669 8.8e-53 212.2 278 47.1
Atru.chr3.942 Acer truncatum HOM05D007700 ORTHO05D009669 1.5e-52 211.5 208 50.5
VMungo0331G0753 Vigna mungo HOM05D007700 ORTHO05D009669 3.3e-52 210.3 272 44.5
Potri.005G103300 Populus trichocarpa HOM05D007700 ORTHO05D009669 4.4e-52 209.9 269 48.0
Dinv40165 Davidia involucrata HOM05D007700 ORTHO05D009669 5.7e-52 209.5 278 47.5
Eucgr.I02272 Eucalyptus grandis HOM05D007700 ORTHO05D009669 9.7e-52 208.8 281 44.8
Rhsim10G0201800 Rhododendron simsii HOM05D000242 ORTHO05D009669 3.7e-51 206.8 208 52.4
Sabra05G0085500 Salix brachista HOM05D007700 ORTHO05D009669 3.7e-51 206.8 270 48.5
Solyc02g082970.1 Solanum lycopersicum HOM05D007700 ORTHO05D009669 4.8e-51 206.5 271 46.1
Nn6g31772 Nelumbo nucifera HOM05D007700 ORTHO05D009669 2.4e-50 204.1 283 44.2
ClCG01G020760 Citrullus lanatus HOM05D007700 ORTHO05D009669 5.3e-50 203.0 270 47.0
Gohir.D03G003800 Gossypium hirsutum HOM05D007700 ORTHO05D009669 1.5e-49 201.4 268 45.1
arahy.Tifrunner.gnm1.ann1.PXC5PH Arachis hypogaea HOM05D007700 ORTHO05D009669 1.3e-48 198.4 281 42.3
MELO3C007960.2 Cucumis melo HOM05D007700 ORTHO05D009669 2.2e-48 197.6 271 45.8
Gorai.003G004000 Gossypium raimondii HOM05D007700 ORTHO05D009669 2.2e-48 197.6 270 44.8
Aa31LG8G14930 Aethionema arabicum HOM05D007700 ORTHO05D009669 2.9e-48 197.2 206 49.0
CiPaw.07G004600 Carya illinoinensis HOM05D007700 ORTHO05D009669 8.5e-48 195.7 271 47.2
Glyma.07G109000 Glycine max HOM05D007700 ORTHO05D009669 1.4e-47 194.9 273 43.2
Thhalv10022683m.g Eutrema salsugineum HOM05D007700 ORTHO05D009669 2.5e-47 194.1 272 44.5
arahy.Tifrunner.gnm1.ann1.HE2L98 Arachis hypogaea HOM05D007700 ORTHO05D009669 3.2e-47 193.7 275 43.6
TAR625G0909 Trochodendron aralioides HOM05D007700 ORTHO05D009669 9.4e-47 192.2 280 44.3
Dinv08534 Davidia involucrata HOM05D007700 ORTHO05D009669 1.0e-45 188.7 153 62.1
AL3G50640 Arabidopsis lyrata HOM05D007700 ORTHO05D009669 3.9e-45 186.8 206 47.6
BraA09t36788Z Brassica rapa HOM05D007700 ORTHO05D009669 6.7e-45 186.0 276 41.7
DCAR_023138 Daucus carota HOM05D007700 ORTHO05D009669 6.7e-45 186.0 209 52.6
Ca_23118_v3 Cicer arietinum L. HOM05D007700 ORTHO05D009669 8.8e-45 185.7 274 43.4
Psat4g208920 Pisum sativum HOM05D007700 ORTHO05D009669 8.8e-45 185.7 272 46.7
BolC9t54240H Brassica oleracea HOM05D007700 ORTHO05D009669 1.5e-44 184.9 270 41.1
Sp3g31020 Schrenkiella parvula HOM05D007700 ORTHO05D009669 1.5e-44 184.9 206 47.1
C09p13500 Brassica napus HOM05D007700 ORTHO05D009669 2.0e-44 184.5 270 41.1
Haze_03682 Corylus avellana HOM05D006745 ORTHO05D008449 2.0e-44 184.5 270 43.7
Cfa007052 Carpinus fangiana HOM05D007700 ORTHO05D009669 3.3e-44 183.7 274 42.7
A09p11480 Brassica napus HOM05D007700 ORTHO05D009669 5.7e-44 183.0 275 41.5
MBI05_g43154_MAGBIO Magnolia biondii HOM05D007700 ORTHO05D009669 9.7e-44 182.2 273 50.5
Medtr8g005870 Medicago truncatula HOM05D007700 ORTHO05D009669 1.3e-43 181.8 274 45.6
AT2G17670 Arabidopsis thaliana HOM05D007700 ORTHO05D009669 2.8e-43 180.6 275 40.7
Manes.01G153300 Manihot esculenta HOM05D007700 ORTHO05D009669 8.2e-43 179.1 273 43.2
BcaB07g31715 Brassica carinata HOM05D007700 ORTHO05D009669 3.1e-42 177.2 271 44.6
Sed0015131 Sechium edule HOM05D000242 ORTHO05D009669 9.1e-42 175.6 254 41.7
CsaV3_6G047710 Cucumis sativus L. HOM05D007700 ORTHO05D009669 5.9e-41 172.9 273 42.1
TPR.G28737 Trifolium pratense HOM05D007700 ORTHO05D009669 7.7e-41 172.6 268 40.7
PGR119G0746 Punica granatum HOM05D007700 ORTHO05D009669 5.0e-40 169.9 270 38.9
THA.LOC104804288 Tarenaya hassleriana HOM05D007700 ORTHO05D009669 5.0e-40 169.9 268 38.1
Prupe.7G178400 Prunus persica HOM05D007700 ORTHO05D009669 6.5e-40 169.5 269 41.6
HPP92_025432 Vanilla planifolia HOM05D007700 ORTHO05D009669 1.9e-39 167.9 283 38.9
Phvul.010G056500 Phaseolus vulgaris HOM05D007700 ORTHO05D009669 5.5e-39 166.4 278 38.8
Ciclev10025555m.g Citrus clementina HOM05D007700 ORTHO05D009669 9.4e-39 165.6 269 39.4
Peaxi162Scf01310g10029 Petunia axillaris HOM05D007700 ORTHO05D009669 2.1e-38 164.5 271 47.6
Gohir.A02G176100 Gossypium hirsutum HOM05D007700 ORTHO05D009669 5.7e-36 156.4 149 53.0
Nitab4.5_0001581g0090 Nicotiana tabacum HOM05D007700 ORTHO05D009669 5.7e-36 156.4 152 53.3
CAN.G890.59 Capsicum annuum HOM05D007700 ORTHO05D009669 2.8e-35 154.1 152 52.6
Nitab4.5_0003207g0040 Nicotiana tabacum HOM05D007700 ORTHO05D009669 6.3e-35 152.9 152 52.6
SalBow7G3569 Salvia bowleyana HOM05D007700 ORTHO05D009669 1.4e-34 151.8 238 41.6
Migut.C00922 Erythranthe guttata HOM05D007700 ORTHO05D009669 3.1e-34 150.6 253 41.5
SGA_v2.0_scaffold275G46573 Striga asiatica HOM05D007700 ORTHO05D009669 1.6e-33 148.3 239 41.0
MD02G1120600 Malus domestica HOM05D007700 ORTHO05D009669 2.2e-32 144.4 270 37.8
CARHR107900 Cardamine hirsuta HOM05D007700 ORTHO05D009669 5.0e-32 143.3 240 41.2
CDE05G1147 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 2.3e-29 134.4 271 33.9
COL.COLO4_22522 Corchorus olitorius HOM05D007700 ORTHO05D009669 3.7e-27 127.1 227 40.5
Carub.0003s3177 Capsella rubella HOM05D007700 ORTHO05D009669 1.4e-26 125.2 247 34.4
FvH4_1g10671 Fragaria vesca HOM05D007700 ORTHO05D009669 3.1e-26 124.0 194 39.7
FAN23G0395 Fragaria x ananassa HOM05D007700 ORTHO05D009669 3.5e-25 120.6 194 38.7
MSTRG.1126 Avicennia marina HOM05D007700 ORTHO05D009669 4.5e-25 120.2 228 36.8
Lalb_Chr03g0039951 Lupinus albus HOM05D007700 ORTHO05D009669 2.9e-24 117.5 271 33.9
AUR62026170 Chenopodium quinoa HOM05D007700 ORTHO05D009669 1.9e-23 114.8 196 39.3
BcaC04g22956 Brassica carinata HOM05D007700 ORTHO05D009669 1.2e-22 112.1 113 50.4
AUR62041102 Chenopodium quinoa HOM05D007700 ORTHO05D009669 1.2e-22 112.1 198 38.9
Sc03g0003890 Simmondsia chinensis HOM05D007700 ORTHO05D009669 2.1e-22 111.3 191 43.5
TWI73G0108 Tripterygium wilfordii HOM05D007700 ORTHO05D009669 2.1e-22 111.3 198 33.8
Aqoxy6G01792 Aquilegia oxysepala HOM05D007700 ORTHO05D009669 4.0e-21 107.1 223 37.2
EL10Ac6g13369 Beta vulgaris HOM05D007700 ORTHO05D009669 8.8e-21 105.9 210 36.7
Ah.03g134060 Amaranthus hybridus HOM05D007700 ORTHO05D009669 1.5e-20 105.1 200 36.0
ATR0661G421 Amborella trichopoda HOM05D007700 ORTHO05D009669 2.0e-20 104.8 123 49.6
Actinidia17391 Actinidia chinensis HOM05D000192 ORTHO05D000123 7.0e-18 96.3 101 48.5
SHI08474 Sapria himalayana HOM05D007700 ORTHO05D009669 1.2e-17 95.5 107 47.7
CDE05G1645 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 6.6e-16 89.7 73 57.5
Glyma.03G117900 Glycine max HOM05D007700 ORTHO05D009669 3.4e-12 77.4 275 29.1
ATR0739G057 Amborella trichopoda HOM05D007700 ORTHO05D009669 1.7e-08 65.1 243 30.0
TPR.G2949 Trifolium pratense HOM05D003900 ORTHO05D005009 4.3e-07 60.5 205 25.9
Hund21880 Selenicereus undatus HOM05D000162 ORTHO05D000090 1.6e-06 58.5 124 25.0
AUR62006791 Chenopodium quinoa HOM05D000162 ORTHO05D000090 2.1e-06 58.2 127 28.3
Lj6A226T36 Lonicera japonica HOM05D006556 ORTHO05D008146 2.1e-06 58.2 195 28.7
Psat7g005640 Pisum sativum HOM05D003900 ORTHO05D005009 3.6e-06 57.4 187 24.1
Hma1.2p1_1765F.1_g301480 Hydrangea macrophylla HOM05D000424 ORTHO05D000355 4.7e-06 57.0 141 27.7
PSO266G0010 Papaver somniferum HOM05D003900 ORTHO05D005009 6.2e-06 56.6 170 25.9
Aqoxy5G03537 Aquilegia oxysepala HOM05D000424 ORTHO05D008586 8.0e-06 56.2 107 29.9
FAN08G2598 Fragaria x ananassa HOM05D000424 ORTHO05D000355 8.0e-06 56.2 120 28.3
Lsat_1_v5_gn_7_2720 Lactuca sativa HOM05D003900 ORTHO05D005009 8.0e-06 56.2 165 26.1
TWI79G0596 Tripterygium wilfordii HOM05D007173 ORTHO05D009151 8.0e-06 56.2 91 29.7


User provided reference genes

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