Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0191931 Helianthus annuus HOM05D009784 ORTHO05D010235 8.0e-210 733.4 348 100.0
HanXRQChr07g0191951 Helianthus annuus HOM05D009784 ORTHO05D010235 1.1e-113 414.1 371 59.8
HanXRQChr07g0191941 Helianthus annuus HOM05D009784 ORTHO05D010235 3.2e-105 386.0 293 67.2
ECA246G2169 Erigeron canadensis HOM05D000983 ORTHO05D006794 7.1e-73 278.5 310 49.4
Lsat_1_v5_gn_3_51441 Lactuca sativa HOM05D009784 ORTHO05D010235 1.6e-72 277.3 297 49.8
Lsat_1_v5_gn_4_8941 Lactuca sativa HOM05D009784 ORTHO05D000088 5.3e-36 156.0 262 33.6
ECA234G0573 Erigeron canadensis HOM05D009784 ORTHO05D010235 2.5e-33 147.1 210 40.5
HanXRQChr05g0151691 Helianthus annuus HOM05D009784 ORTHO05D010235 5.5e-33 146.0 238 33.6
HanXRQChr08g0216601 Helianthus annuus HOM05D009784 ORTHO05D010235 8.8e-31 138.7 227 31.7
HanXRQChr12g0380731 Helianthus annuus HOM05D009784 ORTHO05D010235 2.0e-30 137.5 268 32.1
HanXRQChr17g0570521 Helianthus annuus HOM05D009784 ORTHO05D010235 2.2e-29 134.0 299 31.1
Lsat_1_v5_gn_4_9001 Lactuca sativa HOM05D009784 ORTHO05D000088 2.2e-29 134.0 266 30.1
Lsat_1_v5_gn_4_9181 Lactuca sativa HOM05D009784 ORTHO05D010235 1.8e-28 131.0 247 31.6
HanXRQChr05g0143091 Helianthus annuus HOM05D009784 ORTHO05D010235 2.4e-28 130.6 109 64.2
ECA234G2376 Erigeron canadensis HOM05D009784 ORTHO05D010235 4.5e-27 126.3 267 31.8
HanXRQChr06g0167131 Helianthus annuus HOM05D009784 ORTHO05D010235 5.0e-26 122.9 94 68.1
ECA234G4443 Erigeron canadensis HOM05D009784 ORTHO05D010235 2.7e-24 117.1 265 27.9
ECA234G1207 Erigeron canadensis HOM05D009784 ORTHO05D000088 2.3e-23 114.0 222 32.4
ECA234G3336 Erigeron canadensis HOM05D000015 ORTHO05D000270 8.8e-23 112.1 229 31.9
Cc07_g05490 Coffea canephora HOM05D000823 ORTHO05D000088 4.8e-21 106.3 259 30.1
CSS0024635 Camellia sinensis var. sinensis HOM05D009784 ORTHO05D010235 8.2e-21 105.5 208 32.7
Thecc.01G047300 Theobroma cacao HOM05D000823 ORTHO05D000088 7.7e-19 99.0 267 28.8
Lsat_1_v5_gn_4_9021 Lactuca sativa HOM05D009784 ORTHO05D000088 1.0e-18 98.6 102 43.1
Dinv26758 Davidia involucrata HOM05D000823 ORTHO05D000088 1.3e-18 98.2 258 29.5
Migut.D01639 Erythranthe guttata HOM05D000888 ORTHO05D000740 1.7e-18 97.8 215 29.3
TAR376G0714 Trochodendron aralioides HOM05D000823 ORTHO05D000088 2.2e-18 97.4 288 25.3
SGA_v2.0_scaffold15G07222 Striga asiatica HOM05D010976 ORTHO05D000088 4.7e-16 89.7 237 28.7
SalBow1G4396 Salvia bowleyana HOM05D010976 ORTHO05D000088 1.2e-14 85.1 222 25.2
HanXRQChr17g0570531 Helianthus annuus HOM05D009784 ORTHO05D010235 1.5e-14 84.7 231 28.6
Lsat_1_v5_gn_3_94320 Lactuca sativa HOM05D000395 ORTHO05D000088 4.4e-14 83.2 233 28.3
Lj2C600T9 Lonicera japonica HOM05D000395 ORTHO05D000088 4.4e-14 83.2 254 26.0
PSO675G1309 Papaver somniferum HOM05D000395 ORTHO05D000088 7.5e-14 82.4 253 25.7
Migut.D01642 Erythranthe guttata HOM05D000888 ORTHO05D000740 1.7e-13 81.3 209 26.8
MSTRG.23799 Avicennia marina HOM05D010976 ORTHO05D000088 2.8e-13 80.5 258 27.9
Aqoxy6G00930 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 3.7e-13 80.1 276 26.1
CANSAT80G0874 Cannabis sativa HOM05D000823 ORTHO05D000088 4.8e-13 79.7 259 25.9
Nn6g32142 Nelumbo nucifera HOM05D000823 ORTHO05D000088 6.3e-13 79.3 279 23.7
PSO541G0256 Papaver somniferum HOM05D000395 ORTHO05D000088 8.2e-13 79.0 242 26.4
FAN03G0739 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.4e-12 78.2 224 25.9
Lsat_1_v5_gn_3_94261 Lactuca sativa HOM05D009784 ORTHO05D000088 1.4e-12 78.2 254 26.0
CDE04G1885 Ceratophyllum demersum HOM05D000823 ORTHO05D000088 1.8e-12 77.8 99 44.4
Cc07_g05480 Coffea canephora HOM05D000823 ORTHO05D000088 1.8e-12 77.8 259 24.7
PGR042G3245 Punica granatum HOM05D000823 ORTHO05D000088 2.4e-12 77.4 240 24.2
FvH4_7g23440 Fragaria vesca HOM05D000823 ORTHO05D000088 3.1e-12 77.0 234 25.6
HanXRQChr06g0183971 Helianthus annuus HOM05D009784 ORTHO05D010235 9.1e-12 75.5 264 26.5
ECA246G4121 Erigeron canadensis HOM05D009784 ORTHO05D010235 1.2e-11 75.1 133 32.3
FAN06G0999 Fragaria x ananassa HOM05D000823 ORTHO05D000088 2.7e-11 73.9 216 25.5
Gohir.D03G019725 Gossypium hirsutum HOM05D000823 ORTHO05D010235 7.7e-11 72.4 239 26.8
Gorai.003G020600 Gossypium raimondii HOM05D000823 ORTHO05D010235 7.7e-11 72.4 239 26.8
Solyc02g065340.3 Solanum lycopersicum HOM05D009106 ORTHO05D010235 7.7e-11 72.4 270 23.7
FAN06G1958 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.3e-10 71.6 216 25.5
COL.COLO4_11318 Corchorus olitorius HOM05D056455 ORTHO05D000088 2.2e-10 70.9 244 23.8
Gohir.A02G160700 Gossypium hirsutum HOM05D000823 ORTHO05D000088 2.2e-10 70.9 247 24.7
MBI16_g31478_MAGBIO Magnolia biondii HOM05D000823 ORTHO05D000088 2.2e-10 70.9 248 22.6
Peaxi162Scf00234g00218 Petunia axillaris HOM05D009106 ORTHO05D010235 5.0e-10 69.7 262 24.0
Cc01_g06500 Coffea canephora HOM05D005797 ORTHO05D000088 6.5e-10 69.3 106 34.0
CDE01G0565 Ceratophyllum demersum HOM05D000823 ORTHO05D000088 1.5e-09 68.2 192 26.6
PSO017G3561 Papaver somniferum HOM05D000823 ORTHO05D000088 1.9e-09 67.8 286 22.0
PSO357G0640 Papaver somniferum HOM05D000823 ORTHO05D000088 1.9e-09 67.8 232 27.6
RcHm_v2.0_Chr6g0259811 Rosa chinensis HOM05D000823 ORTHO05D009132 1.9e-09 67.8 254 23.2
Aqoxy6G00276 Aquilegia oxysepala HOM05D000888 ORTHO05D000740 2.5e-09 67.4 259 26.6
Gohir.A02G160800 Gossypium hirsutum HOM05D000823 ORTHO05D010235 3.2e-09 67.0 239 25.5
MD15G1273900 Malus domestica HOM05D000395 ORTHO05D000088 9.4e-09 65.5 116 31.9
PSO170G1617 Papaver somniferum HOM05D000823 ORTHO05D000088 9.4e-09 65.5 111 31.5
MD00G1162200 Malus domestica HOM05D000888 ORTHO05D000740 1.6e-08 64.7 199 25.1
PGR102G0754 Punica granatum HOM05D000823 ORTHO05D000088 1.6e-08 64.7 230 23.0
SalBow1G1117 Salvia bowleyana HOM05D010976 ORTHO05D000088 2.1e-08 64.3 217 24.0
SalBow1G3945 Salvia bowleyana HOM05D010976 ORTHO05D000088 2.1e-08 64.3 225 24.4
RcHm_v2.0_Chr6g0259331 Rosa chinensis HOM05D000823 ORTHO05D000088 2.7e-08 63.9 240 21.7
Lj2C600G8 Lonicera japonica HOM05D000395 ORTHO05D000088 3.6e-08 63.5 247 23.9
RcHm_v2.0_Chr6g0259931 Rosa chinensis HOM05D000823 ORTHO05D000088 3.6e-08 63.5 233 23.2
Gorai.003G020700 Gossypium raimondii HOM05D000823 ORTHO05D000088 4.7e-08 63.2 241 24.9
PSO170G3350 Papaver somniferum HOM05D000823 ORTHO05D000088 8.0e-08 62.4 112 29.5
PSO170G0660 Papaver somniferum HOM05D000823 ORTHO05D000088 1.4e-07 61.6 112 29.5
Peaxi162Scf01198g00214 Petunia axillaris HOM05D009106 ORTHO05D010235 1.4e-07 61.6 269 23.0
PGR102G3079 Punica granatum HOM05D000823 ORTHO05D000088 1.4e-07 61.6 259 22.8
SalBow1G0661 Salvia bowleyana HOM05D010976 ORTHO05D000088 1.4e-07 61.6 222 23.4
Haze_08008 Corylus avellana HOM05D000823 ORTHO05D000088 1.8e-07 61.2 268 20.9
FvH4_6g38690 Fragaria vesca HOM05D000395 ORTHO05D000088 1.8e-07 61.2 286 21.3
QL09p026229 Quercus lobata HOM05D000395 ORTHO05D000088 2.3e-07 60.8 279 23.3
FAN14G4811 Fragaria x ananassa HOM05D000395 ORTHO05D000088 3.0e-07 60.5 306 22.2
Gohir.D03G019700 Gossypium hirsutum HOM05D000823 ORTHO05D010235 3.0e-07 60.5 102 35.3
Gorai.003G020400 Gossypium raimondii HOM05D000823 ORTHO05D010235 3.0e-07 60.5 102 35.3
FAN10G3479 Fragaria x ananassa HOM05D000823 ORTHO05D000088 4.0e-07 60.1 182 24.2
CANSAT25G0134 Cannabis sativa HOM05D000823 ORTHO05D000088 5.2e-07 59.7 86 33.7
FAN15G0739 Fragaria x ananassa HOM05D000823 ORTHO05D000088 5.2e-07 59.7 114 28.1
Lj2A565G29 Lonicera japonica HOM05D000395 ORTHO05D000088 5.2e-07 59.7 250 23.2
PGR102G1389 Punica granatum HOM05D000823 ORTHO05D000088 5.2e-07 59.7 248 23.0
Nitab4.5_0005238g0010 Nicotiana tabacum HOM05D009106 ORTHO05D010235 6.8e-07 59.3 246 20.7
Psat6g025720 Pisum sativum HOM05D000395 ORTHO05D000088 6.8e-07 59.3 260 24.2
ECA132G0002 Erigeron canadensis HOM05D009784 ORTHO05D010235 8.8e-07 58.9 179 27.4
Nitab4.5_0000806g0040 Nicotiana tabacum HOM05D009106 ORTHO05D010235 1.2e-06 58.5 245 22.0
RcHm_v2.0_Chr2g0103411 Rosa chinensis HOM05D000395 ORTHO05D000088 1.5e-06 58.2 119 30.3
DCAR_003839 Daucus carota HOM05D000823 ORTHO05D000088 2.0e-06 57.8 95 31.6
PSO675G8304 Papaver somniferum HOM05D000395 ORTHO05D000088 2.0e-06 57.8 241 22.0
MELO3C007521.2 Cucumis melo HOM05D000823 ORTHO05D000088 2.6e-06 57.4 118 30.5
PSO170G0378 Papaver somniferum HOM05D000823 ORTHO05D000088 2.6e-06 57.4 281 21.7
SEGI_33129 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 2.6e-06 57.4 114 30.7
FAN26G1384 Fragaria x ananassa HOM05D000395 ORTHO05D000088 4.4e-06 56.6 276 25.4
C04p54280 Brassica napus HOM05D000888 ORTHO05D000740 5.7e-06 56.2 245 24.5
SEGI_33530 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 5.7e-06 56.2 112 31.2
FvH4_1g14670 Fragaria vesca HOM05D000395 ORTHO05D000088 7.5e-06 55.8 265 24.9


User provided reference genes

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