Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0191651 Helianthus annuus HOM05D003805 ORTHO05D004300 7.3e-59 230.3 115 100.0
Lsat_1_v5_gn_2_77300 Lactuca sativa HOM05D003805 ORTHO05D004300 5.1e-36 154.5 120 67.5
ECA238G1778 Erigeron canadensis HOM05D003805 ORTHO05D004300 6.2e-34 147.5 112 67.0
Lsat_1_v5_gn_2_77320 Lactuca sativa HOM05D003805 ORTHO05D004300 2.2e-31 139.0 122 62.3
HanXRQChr14g0440581 Helianthus annuus HOM05D003805 ORTHO05D004300 1.9e-30 136.0 120 59.2
ECA238G4264 Erigeron canadensis HOM05D003805 ORTHO05D004300 1.6e-26 122.9 122 52.5
Hma1.2p1_1297F.1_g274110 Hydrangea macrophylla HOM05D003805 ORTHO05D004300 2.4e-25 119.0 118 54.2
GSVIVG01018926001 Vitis vinifera HOM05D003805 ORTHO05D004300 1.7e-23 112.8 117 52.1
CSS0002171 Camellia sinensis var. sinensis HOM05D003805 ORTHO05D004300 8.4e-23 110.5 119 52.1
Oeu035340.1 Olea europaea HOM05D003805 ORTHO05D004300 8.4e-23 110.5 119 52.9
SalBow8G4897 Salvia bowleyana HOM05D003805 ORTHO05D004300 1.1e-22 110.2 115 53.0
QL06p047086 Quercus lobata HOM05D003805 ORTHO05D004300 3.2e-22 108.6 119 50.4
CAN.G358.54 Capsicum annuum HOM05D003805 ORTHO05D004300 2.3e-20 102.4 109 52.3
PGR119G0937 Punica granatum HOM05D003805 ORTHO05D004300 2.3e-20 102.4 124 46.0
PGSC0003DMG400003519 Solanum tuberosum HOM05D003805 ORTHO05D004300 2.3e-20 102.4 109 52.3
TWI09G1369 Tripterygium wilfordii HOM05D003805 ORTHO05D004300 3.9e-20 101.7 119 51.3
Haze_15065 Corylus avellana HOM05D000625 ORTHO05D010258 5.1e-20 101.3 116 51.7
DCAR_016030 Daucus carota HOM05D003805 ORTHO05D004300 8.7e-20 100.5 126 48.4
Lsat_1_v5_gn_8_64500 Lactuca sativa HOM05D003805 ORTHO05D004300 2.5e-19 99.0 86 59.3
Lsat_1_v5_gn_2_77360 Lactuca sativa HOM05D003805 ORTHO05D004300 4.3e-19 98.2 106 53.8
BcaB01g00567 Brassica carinata HOM05D003805 ORTHO05D004300 5.7e-19 97.8 127 42.5
Oeu025181.1 Olea europaea HOM05D003805 ORTHO05D004300 7.4e-19 97.4 109 49.5
Nitab4.5_0000178g0350 Nicotiana tabacum HOM05D003805 ORTHO05D004300 9.7e-19 97.1 112 51.8
Peaxi162Scf00366g00711 Petunia axillaris HOM05D003805 ORTHO05D004300 9.7e-19 97.1 113 48.7
Solyc02g085005.1 Solanum lycopersicum HOM05D003805 ORTHO05D004300 9.7e-19 97.1 109 51.4
Nitab4.5_0007490g0050 Nicotiana tabacum HOM05D003805 ORTHO05D004300 1.6e-18 96.3 112 50.0
Sopen02g029690 Solanum pennellii HOM05D003805 ORTHO05D004300 2.2e-18 95.9 111 50.5
BcaC07g39558 Brassica carinata HOM05D003805 ORTHO05D004300 3.7e-18 95.1 128 41.4
C08p26110 Brassica napus HOM05D003805 ORTHO05D004300 3.7e-18 95.1 128 41.4
BolC8t50229H Brassica oleracea HOM05D003805 ORTHO05D004300 3.7e-18 95.1 128 41.4
Duzib264G0487 Durio zibethinus HOM05D003805 ORTHO05D004300 4.8e-18 94.7 126 42.1
Cpa.g.sc6.148 Carica papaya HOM05D003805 ORTHO05D004300 8.2e-18 94.0 135 42.2
Lj2g0025508 Lotus japonicus HOM05D003805 ORTHO05D004300 8.2e-18 94.0 123 44.7
Thhalv10010834m.g Eutrema salsugineum HOM05D003805 ORTHO05D004300 1.1e-17 93.6 123 44.7
Medtr5g020860 Medicago truncatula HOM05D003805 ORTHO05D004300 1.4e-17 93.2 131 44.3
Ah.03g141100 Amaranthus hybridus HOM05D003805 ORTHO05D004300 1.8e-17 92.8 131 42.7
Peaxi162Scf00366g00066 Petunia axillaris HOM05D003805 ORTHO05D004300 3.1e-17 92.0 112 49.1
Glyma.11G071100 Glycine max HOM05D003805 ORTHO05D004300 5.3e-17 91.3 119 45.4
A09p44010 Brassica napus HOM05D003805 ORTHO05D004300 6.9e-17 90.9 125 40.8
BraA09t39859Z Brassica rapa HOM05D003805 ORTHO05D004300 6.9e-17 90.9 125 40.8
Nitab4.5_0012261g0010 Nicotiana tabacum HOM05D003805 ORTHO05D004300 6.9e-17 90.9 112 46.4
VMungo1215G0776 Vigna mungo HOM05D003805 ORTHO05D004300 6.9e-17 90.9 121 45.5
Lalb_Chr09g0322201 Lupinus albus HOM05D003805 ORTHO05D004300 9.0e-17 90.5 117 45.3
Thecc.01G031800 Theobroma cacao HOM05D003805 ORTHO05D004300 9.0e-17 90.5 128 41.4
Gohir.D12G063500 Gossypium hirsutum HOM05D003805 ORTHO05D004300 1.2e-16 90.1 134 41.0
Gorai.008G066800 Gossypium raimondii HOM05D003805 ORTHO05D004300 1.2e-16 90.1 134 41.0
Sabra07G0019500 Salix brachista HOM05D003805 ORTHO05D004300 1.5e-16 89.7 107 44.9
Solyc02g085010.1 Solanum lycopersicum HOM05D003805 ORTHO05D004300 1.5e-16 89.7 117 48.7
Gohir.A11G183100 Gossypium hirsutum HOM05D003805 ORTHO05D004300 2.0e-16 89.4 123 42.3
Nitab4.5_0000178g0280 Nicotiana tabacum HOM05D003805 ORTHO05D004300 2.0e-16 89.4 108 47.2
Glyma.01G172100 Glycine max HOM05D003805 ORTHO05D004300 2.6e-16 89.0 121 47.1
Gohir.A12G063700 Gossypium hirsutum HOM05D003805 ORTHO05D004300 2.6e-16 89.0 134 41.0
Peaxi162Scf00366g00073 Petunia axillaris HOM05D003805 ORTHO05D004300 2.6e-16 89.0 114 47.4
Aa31LG4G19000 Aethionema arabicum HOM05D003805 ORTHO05D004300 3.4e-16 88.6 124 39.5
A01p23830 Brassica napus HOM05D003805 ORTHO05D004300 3.4e-16 88.6 122 41.8
BraA01t02291Z Brassica rapa HOM05D003805 ORTHO05D004300 3.4e-16 88.6 122 41.8
COL.COLO4_22043 Corchorus olitorius HOM05D003805 ORTHO05D004300 3.4e-16 88.6 131 39.7
Potri.007G022300 Populus trichocarpa HOM05D003805 ORTHO05D004300 3.4e-16 88.6 109 46.8
Sopen02g029700 Solanum pennellii HOM05D003805 ORTHO05D004300 5.9e-16 87.8 117 48.7
BcaB05g23252 Brassica carinata HOM05D003805 ORTHO05D004300 7.7e-16 87.4 130 39.2
THA.LOC104826691 Tarenaya hassleriana HOM05D003805 ORTHO05D004300 7.7e-16 87.4 126 38.1
A03p48010 Brassica napus HOM05D003805 ORTHO05D004300 1.0e-15 87.0 119 41.2
Phvul.002G032400 Phaseolus vulgaris HOM05D003805 ORTHO05D004300 1.0e-15 87.0 121 43.8
Sed0017680 Sechium edule HOM05D003805 ORTHO05D004300 1.0e-15 87.0 116 44.0
Migut.H02530 Erythranthe guttata HOM05D003805 ORTHO05D004300 1.3e-15 86.7 117 47.0
PGSC0003DMG400003518 Solanum tuberosum HOM05D003805 ORTHO05D004300 1.3e-15 86.7 110 49.1
C07p46020 Brassica napus HOM05D003805 ORTHO05D004300 1.7e-15 86.3 119 41.2
Gohir.D11G189500 Gossypium hirsutum HOM05D003805 ORTHO05D004300 1.7e-15 86.3 125 43.2
MELO3C007840.2 Cucumis melo HOM05D003805 ORTHO05D004300 2.2e-15 85.9 117 43.6
CARHR160470 Cardamine hirsuta HOM05D003805 ORTHO05D004300 2.9e-15 85.5 123 41.5
PGSC0003DMG401003517 Solanum tuberosum HOM05D003805 ORTHO05D004300 2.9e-15 85.5 110 48.2
THA.LOC104819775 Tarenaya hassleriana HOM05D003805 ORTHO05D004300 2.9e-15 85.5 131 45.0
Gorai.007G201700 Gossypium raimondii HOM05D003805 ORTHO05D004300 3.8e-15 85.1 127 42.5
AT3G50900 Arabidopsis thaliana HOM05D003805 ORTHO05D004300 5.0e-15 84.7 123 39.8
Psat2g157880 Pisum sativum HOM05D003805 ORTHO05D004300 5.0e-15 84.7 129 39.5
SGA_v2.0_scaffold12G06299 Striga asiatica HOM05D003805 ORTHO05D004300 5.0e-15 84.7 107 46.7
Sed0008243 Sechium edule HOM05D003805 ORTHO05D004300 6.5e-15 84.3 116 44.0
Aa31LG6G13290 Aethionema arabicum HOM05D003805 ORTHO05D004300 8.5e-15 84.0 124 43.5
PGSC0003DMG402003517 Solanum tuberosum HOM05D003805 ORTHO05D004300 1.1e-14 83.6 103 49.5
Ca_22293_v3 Cicer arietinum L. HOM05D003805 ORTHO05D004300 1.4e-14 83.2 124 44.4
Sp1g22390 Schrenkiella parvula HOM05D003805 ORTHO05D004300 1.4e-14 83.2 125 45.6
BolC7t45120H Brassica oleracea HOM05D003805 ORTHO05D004300 2.5e-14 82.4 126 39.7
Duzib147G0407 Durio zibethinus HOM05D003805 ORTHO05D004300 2.5e-14 82.4 128 39.8
AL5G31260 Arabidopsis lyrata HOM05D003805 ORTHO05D004300 3.2e-14 82.0 123 39.8
AT2G18210 Arabidopsis thaliana HOM05D003805 ORTHO05D004300 3.2e-14 82.0 125 45.6
TPR.G2362 Trifolium pratense HOM05D003805 ORTHO05D004300 4.2e-14 81.6 121 39.7
Lalb_Chr16g0391061 Lupinus albus HOM05D003805 ORTHO05D004300 5.5e-14 81.3 117 42.7
AL3G51440 Arabidopsis lyrata HOM05D003805 ORTHO05D004300 7.2e-14 80.9 125 45.6
Actinidia19196 Actinidia chinensis HOM05D002962 ORTHO05D003280 9.4e-14 80.5 104 45.2
Carub.0005s1729 Capsella rubella HOM05D003805 ORTHO05D004300 9.4e-14 80.5 126 36.5
Carub.0007s0382 Capsella rubella HOM05D003805 ORTHO05D004300 9.4e-14 80.5 123 46.3
Sc16g0002610 Simmondsia chinensis HOM05D003805 ORTHO05D004300 9.4e-14 80.5 125 42.4
VMungo0251G0164 Vigna mungo HOM05D003805 ORTHO05D004300 9.4e-14 80.5 129 39.5
Manes.02G096100 Manihot esculenta HOM05D003805 ORTHO05D004300 2.1e-13 79.3 119 45.4
Nn5g29663 Nelumbo nucifera HOM05D003805 ORTHO05D004300 2.1e-13 79.3 113 40.7
AL7G14560 Arabidopsis lyrata HOM05D003805 ORTHO05D004300 2.7e-13 79.0 123 45.5
AUR62004083 Chenopodium quinoa HOM05D000625 ORTHO05D000467 2.7e-13 79.0 92 46.7
Manes.01G137700 Manihot esculenta HOM05D003805 ORTHO05D004300 2.7e-13 79.0 145 37.9
AT4G36500 Arabidopsis thaliana HOM05D003805 ORTHO05D004300 3.6e-13 78.6 123 45.5
Carub.0003s3236 Capsella rubella HOM05D003805 ORTHO05D004300 3.6e-13 78.6 125 42.4
Glyma.02G055000 Glycine max HOM05D003805 ORTHO05D004300 3.6e-13 78.6 120 43.3
THA.LOC104807465 Tarenaya hassleriana HOM05D003805 ORTHO05D004300 3.6e-13 78.6 121 43.8
A01p02360 Brassica napus HOM05D003805 ORTHO05D004300 4.6e-13 78.2 123 43.9
C01p02570 Brassica napus HOM05D003805 ORTHO05D004300 4.6e-13 78.2 123 43.9
Carub.0003s3237 Capsella rubella HOM05D003805 ORTHO05D004300 4.6e-13 78.2 123 44.7
CsaV3_6G046430 Cucumis sativus L. HOM05D003805 ORTHO05D004300 4.6e-13 78.2 114 41.2
TPR.G24112 Trifolium pratense HOM05D003805 ORTHO05D004300 6.1e-13 77.8 129 41.9
BcaB03g12394 Brassica carinata HOM05D003805 ORTHO05D004300 7.9e-13 77.4 123 45.5
Lj4g0028115 Lotus japonicus HOM05D003805 ORTHO05D004300 7.9e-13 77.4 126 40.5
Psat4g094720 Pisum sativum HOM05D003805 ORTHO05D004300 7.9e-13 77.4 129 40.3
BraA01t00224Z Brassica rapa HOM05D003805 ORTHO05D004300 1.0e-12 77.0 122 43.4
Medtr8g077145 Medicago truncatula HOM05D003805 ORTHO05D004300 1.0e-12 77.0 131 38.9
Sp7g34160 Schrenkiella parvula HOM05D003805 ORTHO05D004300 1.0e-12 77.0 123 43.1
TPR.G24102 Trifolium pratense HOM05D003805 ORTHO05D004300 1.0e-12 77.0 132 40.2
C07p61730 Brassica napus HOM05D003805 ORTHO05D004300 1.4e-12 76.6 123 44.7
BolC1t00245H Brassica oleracea HOM05D003805 ORTHO05D004300 1.4e-12 76.6 123 43.1
BolC7t46598H Brassica oleracea HOM05D003805 ORTHO05D004300 1.4e-12 76.6 123 44.7
BraA03t13909Z Brassica rapa HOM05D003805 ORTHO05D004300 1.4e-12 76.6 150 32.0
CARHR244820 Cardamine hirsuta HOM05D003805 ORTHO05D004300 1.4e-12 76.6 123 44.7
Phvul.003G255400 Phaseolus vulgaris HOM05D003805 ORTHO05D004300 1.4e-12 76.6 121 43.0
BcaNung00728 Brassica carinata HOM05D003805 ORTHO05D004300 2.3e-12 75.9 123 43.1
Thhalv10026576m.g Eutrema salsugineum HOM05D003805 ORTHO05D004300 2.3e-12 75.9 123 44.7
Lj4g0009905 Lotus japonicus HOM05D003805 ORTHO05D004300 2.3e-12 75.9 126 39.7
Lalb_Chr09g0333461 Lupinus albus HOM05D003805 ORTHO05D004300 2.3e-12 75.9 118 41.5
Glyma.02G054900 Glycine max HOM05D003805 ORTHO05D004300 3.0e-12 75.5 120 40.8
unitig_0.g473 Utricularia gibba HOM05D003805 ORTHO05D004300 3.0e-12 75.5 117 43.6
A01p02370 Brassica napus HOM05D003805 ORTHO05D004300 3.9e-12 75.1 120 41.7
BraA01t00225Z Brassica rapa HOM05D003805 ORTHO05D004300 3.9e-12 75.1 120 41.7
Thhalv10023197m.g Eutrema salsugineum HOM05D003805 ORTHO05D004300 3.9e-12 75.1 121 42.1
Lj4g0007128 Lotus japonicus HOM05D003805 ORTHO05D004300 3.9e-12 75.1 126 38.9
Psat4g094760 Pisum sativum HOM05D003805 ORTHO05D004300 3.9e-12 75.1 121 38.8
Sp7g34150 Schrenkiella parvula HOM05D003805 ORTHO05D004300 3.9e-12 75.1 123 44.7
BcaC01g00464 Brassica carinata HOM05D003805 ORTHO05D004300 5.1e-12 74.7 121 43.0
BcaNung05311 Brassica carinata HOM05D003805 ORTHO05D004300 5.1e-12 74.7 121 40.5
C03p80150 Brassica napus HOM05D003805 ORTHO05D004300 5.1e-12 74.7 121 43.0
BolC3t20271H Brassica oleracea HOM05D003805 ORTHO05D004300 5.1e-12 74.7 121 43.0
BraA08t34177Z Brassica rapa HOM05D003805 ORTHO05D004300 5.1e-12 74.7 121 43.0
A08p22170 Brassica napus HOM05D003805 ORTHO05D004300 6.7e-12 74.3 121 43.0
Phvul.003G255300 Phaseolus vulgaris HOM05D003805 ORTHO05D004300 6.7e-12 74.3 121 39.7
Psat4g094680 Pisum sativum HOM05D003805 ORTHO05D004300 6.7e-12 74.3 121 38.8
VMungo0251G1302 Vigna mungo HOM05D003805 ORTHO05D004300 6.7e-12 74.3 120 41.7
BcaNung00729 Brassica carinata HOM05D003805 ORTHO05D004300 8.8e-12 73.9 121 40.5
C01p02580 Brassica napus HOM05D003805 ORTHO05D004300 8.8e-12 73.9 121 40.5
BolC1t00246H Brassica oleracea HOM05D003805 ORTHO05D004300 8.8e-12 73.9 121 40.5
Lsat_1_v5_gn_9_118581 Lactuca sativa HOM05D003805 ORTHO05D004300 1.5e-11 73.2 68 57.4
A03p64280 Brassica napus HOM05D003805 ORTHO05D004300 2.0e-11 72.8 123 43.1
BraA03t15498Z Brassica rapa HOM05D003805 ORTHO05D004300 2.0e-11 72.8 123 43.1
Glyma.16G135400 Glycine max HOM05D003805 ORTHO05D004300 2.0e-11 72.8 114 40.4
BcaNung05312 Brassica carinata HOM05D003805 ORTHO05D004300 3.3e-11 72.0 123 40.7
Dinv40009 Davidia involucrata HOM05D002962 ORTHO05D004300 3.3e-11 72.0 108 42.6
Sc03g0003120 Simmondsia chinensis HOM05D003805 ORTHO05D004300 3.3e-11 72.0 134 37.3
arahy.Tifrunner.gnm1.ann1.IAMR94 Arachis hypogaea HOM05D003805 ORTHO05D004300 7.4e-11 70.9 131 35.9
Potri.007G022200 Populus trichocarpa HOM05D003805 ORTHO05D004300 7.4e-11 70.9 110 41.8
SGA_v2.0_scaffold51G18830 Striga asiatica HOM05D003805 ORTHO05D004300 1.3e-10 70.1 105 40.0
BcaC06g33329 Brassica carinata HOM05D003805 ORTHO05D004300 2.2e-10 69.3 144 31.2
BcaB02g10024 Brassica carinata HOM05D003805 ORTHO05D004300 2.8e-10 68.9 120 36.7
Sabra07G0019300 Salix brachista HOM05D003805 ORTHO05D004300 4.8e-10 68.2 108 38.9
Sp2g30240 Schrenkiella parvula HOM05D003805 ORTHO05D004300 4.8e-10 68.2 121 38.0
AL8G45040 Arabidopsis lyrata HOM05D003805 ORTHO05D004300 6.3e-10 67.8 122 36.1
Glyma.16G135600 Glycine max HOM05D003805 ORTHO05D004300 6.3e-10 67.8 121 42.1
A07p17480 Brassica napus HOM05D000001 ORTHO05D010258 8.2e-10 67.4 124 37.1
BcaC09g50052 Brassica carinata HOM05D003805 ORTHO05D004300 1.1e-09 67.0 111 38.7
C01p29550 Brassica napus HOM05D003805 ORTHO05D004300 1.1e-09 67.0 111 38.7
BolC1t02898H Brassica oleracea HOM05D003805 ORTHO05D004300 1.1e-09 67.0 111 38.7
Lalb_Chr05g0212681 Lupinus albus HOM05D003805 ORTHO05D004300 1.4e-09 66.6 105 41.0
TAR247G0001 Trochodendron aralioides HOM05D003805 ORTHO05D004300 1.4e-09 66.6 108 38.0
AT5G66490 Arabidopsis thaliana HOM05D003805 ORTHO05D004300 1.8e-09 66.2 120 36.7
Aqoxy6G01157 Aquilegia oxysepala HOM05D003805 ORTHO05D004300 2.4e-09 65.9 120 40.0
CARHR281260 Cardamine hirsuta HOM05D003805 ORTHO05D004300 3.1e-09 65.5 121 36.4
BcaC06g33070 Brassica carinata HOM05D003805 ORTHO05D004300 6.9e-09 64.3 184 26.1
Thhalv10005334m.g Eutrema salsugineum HOM05D003805 ORTHO05D004300 1.5e-08 63.2 122 36.1
BcaC06g33330 Brassica carinata HOM05D003805 ORTHO05D004300 4.5e-08 61.6 153 30.1
BcaC06g34708 Brassica carinata HOM05D003805 ORTHO05D004300 5.9e-08 61.2 124 36.3
C07p25410 Brassica napus HOM05D000001 ORTHO05D010258 5.9e-08 61.2 124 36.3
BolC7t43064H Brassica oleracea HOM05D000001 ORTHO05D010258 5.9e-08 61.2 124 36.3
Aa31LG8G15780 Aethionema arabicum HOM05D003805 ORTHO05D004300 1.7e-07 59.7 36 69.4
BraA07t29468Z Brassica rapa HOM05D000001 ORTHO05D010258 1.7e-07 59.7 123 35.8
Nn1g04930 Nelumbo nucifera HOM05D003805 ORTHO05D004300 2.9e-07 58.9 51 51.0
Aa31LG1G15010 Aethionema arabicum HOM05D003805 ORTHO05D004300 6.5e-07 57.8 69 43.5
HPP92_023423 Vanilla planifolia HOM05D003805 ORTHO05D004300 1.4e-06 56.6 45 53.3
CDE05G0774 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 1.9e-06 56.2 113 35.4


User provided reference genes

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