Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0191611 Helianthus annuus HOM05D005864 ORTHO05D006770 3.9e-236 821.2 459 100.0
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 8.1e-117 424.9 522 49.8
Lsat_1_v5_gn_3_43700 Lactuca sativa HOM05D005864 ORTHO05D006770 1.6e-101 374.0 476 51.3
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 2.2e-74 283.9 477 42.1
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 8.8e-71 271.9 477 44.2
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 3.1e-68 263.5 478 44.4
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 1.4e-63 248.1 469 38.0
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 4.4e-62 243.0 474 40.3
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 1.2e-59 235.0 479 40.7
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 2.6e-59 233.8 476 38.7
Lj3g0027429 Lotus japonicus HOM05D005864 ORTHO05D006770 7.2e-57 225.7 472 36.9
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 1.0e-55 221.9 471 36.7
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 1.0e-55 221.9 475 39.4
MELO3C018803.2 Cucumis melo HOM05D005864 ORTHO05D006770 5.2e-55 219.5 474 37.3
Dinv18530 Davidia involucrata HOM05D005864 ORTHO05D006770 1.5e-54 218.0 315 46.7
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 3.3e-54 216.9 476 38.4
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 1.1e-52 211.8 421 37.8
Actinidia12503 Actinidia chinensis HOM05D005864 ORTHO05D006770 2.4e-52 210.7 478 38.7
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 4.1e-52 209.9 480 35.2
Cc05_g05040 Coffea canephora HOM05D005864 ORTHO05D006770 1.2e-51 208.4 488 39.5
Lalb_Chr19g0135701 Lupinus albus HOM05D005864 ORTHO05D006770 1.6e-51 208.0 476 35.1
Nitab4.5_0000631g0060 Nicotiana tabacum HOM05D005864 ORTHO05D006770 7.7e-51 205.7 318 43.1
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 1.0e-50 205.3 460 36.5
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 1.0e-50 205.3 487 37.2
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 2.9e-50 203.8 329 42.6
Oeu041940.1 Olea europaea HOM05D005864 ORTHO05D006770 5.0e-50 203.0 565 34.5
TWI75G1887 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 1.5e-49 201.4 420 36.0
FvH4_6g43530 Fragaria vesca HOM05D005864 ORTHO05D006770 1.6e-48 198.0 461 34.9
CsaV3_7G003760 Cucumis sativus L. HOM05D005864 ORTHO05D006770 2.1e-48 197.6 464 35.8
arahy.Tifrunner.gnm1.ann1.VAE2IM Arachis hypogaea HOM05D005864 ORTHO05D006770 2.7e-48 197.2 535 32.5
CAN.G80.20 Capsicum annuum HOM05D005864 ORTHO05D006770 1.4e-47 194.9 501 35.1
Nitab4.5_0006207g0020 Nicotiana tabacum HOM05D005864 ORTHO05D006770 1.4e-47 194.9 493 36.5
HPP92_002197 Vanilla planifolia HOM05D005864 ORTHO05D006770 1.4e-47 194.9 488 34.4
Eucgr.K00844 Eucalyptus grandis HOM05D005864 ORTHO05D006770 2.3e-47 194.1 329 41.6
arahy.Tifrunner.gnm1.ann1.UG5YAZ Arachis hypogaea HOM05D005864 ORTHO05D006770 5.2e-47 193.0 542 31.5
Phvul.011G106100 Phaseolus vulgaris HOM05D005864 ORTHO05D006770 8.8e-47 192.2 454 34.1
Solyc12g005770.3 Solanum lycopersicum HOM05D005864 ORTHO05D006770 8.8e-47 192.2 503 35.6
PSO675G8332 Papaver somniferum HOM05D005864 ORTHO05D006770 5.7e-46 189.5 491 34.0
Medtr4g046697 Medicago truncatula HOM05D005864 ORTHO05D006770 7.5e-46 189.1 459 35.1
Psat7g195480 Pisum sativum HOM05D005864 ORTHO05D006770 2.8e-45 187.2 463 33.9
Duzib052G0164 Durio zibethinus HOM05D005864 ORTHO05D006770 6.3e-45 186.0 482 36.5
Glyma.06G306800 Glycine max HOM05D005864 ORTHO05D006770 8.2e-45 185.7 454 33.7
VMungo1127G2082 Vigna mungo HOM05D005864 ORTHO05D006770 1.4e-44 184.9 454 36.1
Migut.M00396 Erythranthe guttata HOM05D005864 ORTHO05D006770 3.1e-44 183.7 465 35.7
Haze_12896 Corylus avellana HOM05D005864 ORTHO05D006770 5.3e-44 183.0 494 34.8
CDE05G3135 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 1.2e-43 181.8 495 34.3
SHI10272 Sapria himalayana HOM05D005864 ORTHO05D006770 2.7e-43 180.6 418 37.1
Prupe.3G220100 Prunus persica HOM05D005864 ORTHO05D006770 4.5e-43 179.9 468 37.2
ClCG02G001780 Citrullus lanatus HOM05D005864 ORTHO05D006770 5.9e-43 179.5 534 32.4
FAN14G4164 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.0e-42 178.7 475 31.6
Glyma.12G101400 Glycine max HOM05D005864 ORTHO05D006770 1.3e-42 178.3 455 34.9
PGR142G4274 Punica granatum HOM05D005864 ORTHO05D006770 1.7e-42 177.9 477 35.2
Sopen12g001690 Solanum pennellii HOM05D005864 ORTHO05D006770 1.1e-41 175.3 491 34.8
Ciclev10015598m.g Citrus clementina HOM05D005864 ORTHO05D006770 9.4e-41 172.2 286 45.8
Aqoxy4G02070 Aquilegia oxysepala HOM05D005864 ORTHO05D006770 8.0e-40 169.1 472 32.6
Cpa.g.sc8.234 Carica papaya HOM05D005864 ORTHO05D006770 1.4e-39 168.3 482 34.2
Manes.12G077600 Manihot esculenta HOM05D005864 ORTHO05D006770 4.0e-39 166.8 426 35.4
unitig_699.g19613 Utricularia gibba HOM05D005864 ORTHO05D006770 4.0e-39 166.8 471 33.3
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 2.0e-38 164.5 429 32.2
TAR624G1226 Trochodendron aralioides HOM05D005864 ORTHO05D006770 2.0e-38 164.5 336 40.2
PSO541G3214 Papaver somniferum HOM05D005864 ORTHO05D006770 2.6e-38 164.1 529 30.8
ATR0794G118 Amborella trichopoda HOM05D005864 ORTHO05D006770 3.4e-38 163.7 499 35.5
Sp3g19810 Schrenkiella parvula HOM05D005864 ORTHO05D006770 2.8e-37 160.6 408 33.1
Gohir.A03G163800 Gossypium hirsutum HOM05D005864 ORTHO05D006770 3.7e-37 160.2 474 34.4
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 4.8e-37 159.8 463 34.1
FAN05G0568 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.8e-36 157.9 457 32.8
FAN09G3055 Fragaria x ananassa HOM05D005864 ORTHO05D006770 1.8e-36 157.9 479 33.4
Os02g0161200 Oryza sativa ssp. japonica HOM05D005864 ORTHO05D006770 1.0e-34 152.1 457 30.4
Peaxi162Scf00012g03212 Petunia axillaris HOM05D005864 ORTHO05D006770 1.0e-34 152.1 490 33.5
Sed0014520 Sechium edule HOM05D005864 ORTHO05D006770 1.0e-34 152.1 362 35.6
AL3G35960 Arabidopsis lyrata HOM05D005864 ORTHO05D006770 3.8e-34 150.2 367 32.4
BcaB04g20556 Brassica carinata HOM05D005864 ORTHO05D006770 3.8e-34 150.2 405 34.3
RcHm_v2.0_Chr2g0160051 Rosa chinensis HOM05D005864 ORTHO05D006770 3.8e-34 150.2 216 42.6
BcaC09g49121 Brassica carinata HOM05D005864 ORTHO05D006770 1.5e-33 148.3 404 33.2
Sed0020795 Sechium edule HOM05D005864 ORTHO05D006770 1.9e-33 147.9 470 34.9
A01p33130 Brassica napus HOM05D005864 ORTHO05D006770 2.5e-33 147.5 404 32.2
Thhalv10020800m.g Eutrema salsugineum HOM05D005864 ORTHO05D006770 3.3e-33 147.1 400 31.0
Gohir.D02G187200 Gossypium hirsutum HOM05D005864 ORTHO05D006770 1.2e-32 145.2 456 33.1
Aa31LG8G8400 Aethionema arabicum HOM05D005864 ORTHO05D006770 2.1e-32 144.4 418 31.3
CARHR097800 Cardamine hirsuta HOM05D005864 ORTHO05D006770 2.1e-32 144.4 406 31.0
Zm00001eb207650 Zea mays HOM05D005864 ORTHO05D006770 2.1e-32 144.4 462 31.2
Rhsim06G0158200 Rhododendron simsii HOM05D005864 ORTHO05D006770 8.0e-32 142.5 510 29.8
BolC1t04192H Brassica oleracea HOM05D005864 ORTHO05D006770 1.4e-31 141.7 404 32.7
unitig_85.g27303 Utricularia gibba HOM05D005864 ORTHO05D006770 5.2e-31 139.8 463 30.9
AT3G21810 Arabidopsis thaliana HOM05D005864 ORTHO05D006770 2.0e-30 137.9 413 30.0
CDE05G1184 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 1.3e-29 135.2 445 32.4
COL.COLO4_12982 Corchorus olitorius HOM05D005864 ORTHO05D006770 4.9e-29 133.3 425 31.8
PGSC0003DMG401024331 Solanum tuberosum HOM05D005864 ORTHO05D006770 4.9e-29 133.3 387 35.4
Lsat_1_v5_gn_9_59080 Lactuca sativa HOM05D005864 ORTHO05D006770 8.3e-29 132.5 122 58.2
Sabra07G0098400 Salix brachista HOM05D005864 ORTHO05D006770 1.8e-28 131.3 426 32.6
DCAR_021187 Daucus carota HOM05D005864 ORTHO05D006770 7.8e-27 125.9 379 32.2
BraA01t03436Z Brassica rapa HOM05D005864 ORTHO05D006770 2.3e-26 124.4 411 30.2
C01p42370 Brassica napus HOM05D005864 ORTHO05D006770 1.9e-25 121.3 419 29.8
Ca_19101_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 6.1e-24 116.3 426 29.8
FAN02G2067 Fragaria x ananassa HOM05D005864 ORTHO05D006770 5.2e-23 113.2 414 30.2
vmacro12226 Vaccinium macrocarpon HOM05D005864 ORTHO05D006770 3.4e-22 110.5 552 27.0
TAR626G1271 Trochodendron aralioides HOM05D005864 ORTHO05D006770 4.4e-22 110.2 145 44.8
TPR.G19040 Trifolium pratense HOM05D005864 ORTHO05D006770 7.5e-22 109.4 421 30.6
AUR62025062 Chenopodium quinoa HOM05D005864 ORTHO05D006770 1.4e-20 105.1 548 24.6
CSS0029042 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 3.2e-20 104.0 184 39.1
Mapoly0099s0053 Marchantia polymorpha HOM05D005864 ORTHO05D006770 5.4e-20 103.2 292 31.2
Actinidia32077 Actinidia chinensis HOM05D005864 ORTHO05D006770 1.2e-19 102.1 368 29.3
MD09G1105200 Malus domestica HOM05D005864 ORTHO05D006770 3.5e-19 100.5 409 34.0
SEGI_09449 Sequoiadendron giganteum HOM05D005864 ORTHO05D006770 1.0e-18 99.0 269 31.2
Carub.0003s2189 Capsella rubella HOM05D005864 ORTHO05D006770 1.7e-18 98.2 357 33.1
AUR62037142 Chenopodium quinoa HOM05D005864 ORTHO05D006770 6.6e-18 96.3 419 26.5
Gorai.005G209600 Gossypium raimondii HOM05D005864 ORTHO05D006770 7.3e-17 92.8 358 31.3
EL10Ac9g20653 Beta vulgaris HOM05D005864 ORTHO05D006770 1.2e-16 92.0 462 28.8
Ah.01g003700 Amaranthus hybridus HOM05D005864 ORTHO05D006770 4.4e-14 83.6 410 27.8
Zm00001eb273610 Zea mays HOM05D005864 ORTHO05D006770 4.9e-13 80.1 250 30.8
FAN09G4739 Fragaria x ananassa HOM05D005864 ORTHO05D006770 2.7e-11 74.3 77 49.4
TAR626G0331 Trochodendron aralioides HOM05D005864 ORTHO05D006770 6.6e-10 69.7 84 50.0
Zm00001eb225260 Zea mays HOM05D005864 ORTHO05D006770 3.3e-09 67.4 113 34.5
CDE05G1677 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 1.2e-08 65.5 38 68.4
Pp3c11_20880 Physcomitrium patens HOM05D005864 ORTHO05D006770 1.6e-08 65.1 246 30.9
CSS0018090 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 7.5e-06 56.2 69 43.5


User provided reference genes

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