Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0189531 Helianthus annuus HOM05D008488 ORTHO05D000385 5.1e-81 304.3 148 100.0
HanXRQChr03g0071511 Helianthus annuus HOM05D008488 ORTHO05D020588 5.0e-52 208.0 116 87.1
HanXRQChr03g0084621 Helianthus annuus HOM05D008488 ORTHO05D000385 5.0e-52 208.0 116 87.1
ECA234G2194 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.8e-41 171.0 118 70.3
ECA096G0001 Erigeron canadensis HOM05D008488 ORTHO05D000385 8.9e-41 170.6 118 70.3
ECA246G4823 Erigeron canadensis HOM05D008488 ORTHO05D000385 7.5e-40 167.5 118 69.5
ECA238G3595 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.4e-38 162.5 115 67.8
ECA236G1232 Erigeron canadensis HOM05D008488 ORTHO05D000385 9.2e-38 160.6 115 67.0
ECA164G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.3e-28 130.2 116 57.8
HanXRQChr04g0099061 Helianthus annuus HOM05D008488 ORTHO05D020588 8.3e-23 110.9 62 87.1
ECA233G0549 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.3e-20 103.6 62 75.8
ECA327G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 6.6e-20 101.3 73 67.1
ECA247G3403 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.8e-18 95.9 124 46.8
ECA127G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 6.8e-17 91.3 97 52.6
vmacro21926 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.5e-16 90.1 105 44.8
vmacro23420 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.5e-16 90.1 105 44.8
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.7e-15 86.7 112 33.9
vmacro22655 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.9e-15 85.9 113 44.2
ECA234G0887 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.1e-14 84.0 76 59.2
MBI19_g00149_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.4e-14 83.6 114 33.3
MBI12_g24830_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-14 83.2 112 32.1
HanXRQChr09g0254541 Helianthus annuus HOM05D008488 ORTHO05D000385 2.4e-14 82.8 47 85.1
PGR044G2648 Punica granatum HOM05D000876 ORTHO05D000285 3.2e-14 82.4 107 36.4
CANSAT11G0213 Cannabis sativa HOM05D001309 ORTHO05D000385 4.1e-14 82.0 106 39.6
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 4.1e-14 82.0 106 39.6
Os04g0610000 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 4.1e-14 82.0 114 35.1
DCAR_001756 Daucus carota HOM05D001309 ORTHO05D000385 7.1e-14 81.3 116 34.5
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.1e-14 81.3 93 37.6
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.2e-14 80.9 114 31.6
MBI16_g34941_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.2e-14 80.9 117 36.8
vmacro03942 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 9.2e-14 80.9 105 43.8
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.2e-13 80.5 93 41.9
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 1.6e-13 80.1 120 32.5
MBI09_g15192_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.7e-13 79.3 93 35.5
MBI17_g16204_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.7e-13 79.3 93 35.5
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.5e-13 79.0 93 40.9
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.5e-13 79.0 93 40.9
CANSAT11G1463 Cannabis sativa HOM05D001309 ORTHO05D000385 3.5e-13 79.0 104 38.5
MBI11_g19485_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.6e-13 78.6 112 31.2
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.6e-13 78.6 99 36.4
Manes.10G118800 Manihot esculenta HOM05D001309 ORTHO05D000385 4.6e-13 78.6 110 31.8
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 4.6e-13 78.6 114 33.3
CSS0004008 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.0e-13 78.2 93 40.9
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 7.8e-13 77.8 111 31.5
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 7.8e-13 77.8 106 34.9
MBI01_g25641_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.0e-12 77.4 114 32.5
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 1.3e-12 77.0 108 32.4
CSS0014937 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.7e-12 76.6 101 38.6
MBI03_g15598_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.3e-12 76.3 112 30.4
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 3.0e-12 75.9 106 33.0
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 3.0e-12 75.9 109 32.1
MBI19_g12820_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.0e-12 75.9 93 35.5
MBI19_g33997_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.9e-12 75.5 110 30.9
MBI14_g27230_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.1e-12 75.1 93 33.3
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 8.6e-12 74.3 109 31.2
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 8.6e-12 74.3 109 31.2
Cpa.g.c35072.1 Carica papaya HOM05D001309 ORTHO05D000385 1.1e-11 73.9 108 36.1
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 1.1e-11 73.9 106 31.1
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 1.1e-11 73.9 100 36.0
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 1.5e-11 73.6 110 32.7
MBI05_g40697_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.5e-11 73.6 110 32.7
MBI13_g26301_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-11 73.2 112 29.5
Gohir.D01G174600 Gossypium hirsutum HOM05D001309 ORTHO05D000385 3.3e-11 72.4 110 31.8
MBI06_g39196_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.3e-11 72.4 110 30.9
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.3e-11 72.0 110 29.1
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 5.6e-11 71.6 102 31.4
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 7.3e-11 71.2 98 32.7
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 7.3e-11 71.2 110 31.8
MBI14_g41280_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 7.3e-11 71.2 93 31.2
Lsat_1_v5_gn_7_106561 Lactuca sativa HOM05D001309 ORTHO05D000385 9.5e-11 70.9 116 33.6
MBI09_g41430_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.2e-10 70.5 91 35.2
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.6e-10 70.1 106 31.1
Manes.07G023800 Manihot esculenta HOM05D001309 ORTHO05D005970 2.1e-10 69.7 102 29.4
ECA247G2753 Erigeron canadensis HOM05D000006 ORTHO05D000062 2.8e-10 69.3 110 34.5
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 3.6e-10 68.9 106 31.1
Sc11g0006850 Simmondsia chinensis HOM05D001309 ORTHO05D000385 4.7e-10 68.6 109 33.9
ECA240G1654 Erigeron canadensis HOM05D005763 ORTHO05D005970 6.2e-10 68.2 106 33.0
ECA238G0557 Erigeron canadensis HOM05D001309 ORTHO05D000385 1.8e-09 66.6 112 30.4
COL.COLO4_05115 Corchorus olitorius HOM05D001309 ORTHO05D004434 2.4e-09 66.2 127 34.6
AUR62010806 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.0e-09 65.5 113 29.2
Ca_18931_v3 Cicer arietinum L. HOM05D001309 ORTHO05D000385 4.0e-09 65.5 112 31.2
COL.COLO4_07670 Corchorus olitorius HOM05D001309 ORTHO05D000385 4.0e-09 65.5 81 34.6
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.0e-09 65.5 102 30.4
MBI10_g17724_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.2e-09 65.1 83 36.1
AUR62019804 Chenopodium quinoa HOM05D004615 ORTHO05D000385 6.8e-09 64.7 113 29.2
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 8.9e-09 64.3 102 30.4
Os04g0609900 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 1.2e-08 63.9 108 28.7
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 1.5e-08 63.5 113 37.2
MBI01_g25649_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.0e-08 63.2 93 33.3
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 2.6e-08 62.8 113 30.1
Gohir.A06G124402 Gossypium hirsutum HOM05D008576 ORTHO05D000385 3.4e-08 62.4 95 33.7
COL.COLO4_21802 Corchorus olitorius HOM05D001309 ORTHO05D000385 4.4e-08 62.0 112 36.6
Lsat_1_v5_gn_4_141161 Lactuca sativa HOM05D001309 ORTHO05D000385 5.8e-08 61.6 116 29.3
Nn7g37626 Nelumbo nucifera HOM05D001309 ORTHO05D000385 5.8e-08 61.6 83 38.6
vmacro03917 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 7.6e-08 61.2 83 41.0
COL.COLO4_08701 Corchorus olitorius HOM05D001309 ORTHO05D000385 9.9e-08 60.8 113 31.0
ECA234G1533 Erigeron canadensis HOM05D000107 ORTHO05D000062 9.9e-08 60.8 101 33.7
Nitab4.5_0001128g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 9.9e-08 60.8 109 28.4
Ah.05g175550 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.3e-07 60.5 109 32.1
Nitab4.5_0003082g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.3e-07 60.5 111 27.9
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 2.2e-07 59.7 112 33.9
AUR62040089 Chenopodium quinoa HOM05D001309 ORTHO05D000385 2.2e-07 59.7 89 30.3
AUR62041672 Chenopodium quinoa HOM05D001309 ORTHO05D000385 2.2e-07 59.7 89 30.3
ECA247G2658 Erigeron canadensis HOM05D001309 ORTHO05D000385 2.2e-07 59.7 123 30.9
Nn1g09472 Nelumbo nucifera HOM05D001309 ORTHO05D000385 2.2e-07 59.7 94 30.9
arahy.Tifrunner.gnm1.ann1.U4Z5MQ Arachis hypogaea HOM05D010482 ORTHO05D000385 2.9e-07 59.3 108 29.6
Nitab4.5_0002394g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.9e-07 59.3 111 26.1
COL.COLO4_36623 Corchorus olitorius HOM05D001309 ORTHO05D000385 4.9e-07 58.5 113 31.0
Nitab4.5_0000769g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.9e-07 58.5 121 28.1
Sc11g0005200 Simmondsia chinensis HOM05D014970 ORTHO05D019369 4.9e-07 58.5 105 31.4
Lj4g0021808 Lotus japonicus HOM05D001309 ORTHO05D000385 6.4e-07 58.2 116 25.9
MBI15_g16946_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.4e-07 58.2 85 29.4
MBI17_g42351_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.4e-07 58.2 86 27.9
arahy.Tifrunner.gnm1.ann1.U7U33W Arachis hypogaea HOM05D010482 ORTHO05D000385 1.1e-06 57.4 108 28.7
Nitab4.5_0004695g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.4e-06 57.0 111 26.1
MBI18_g39412_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.9e-06 56.6 82 31.7
Nitab4.5_0000999g0130 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.9e-06 56.6 90 26.7
Lj4g0009512 Lotus japonicus HOM05D001309 ORTHO05D000385 2.4e-06 56.2 110 27.3
Nitab4.5_0005861g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-06 56.2 99 28.3
Nitab4.5_0007957g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 2.4e-06 56.2 106 26.4
CSS0040510 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.2e-06 55.8 92 32.6
ECA232G4413 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.2e-06 55.8 101 32.7
arahy.Tifrunner.gnm1.ann1.JJQZ3I Arachis hypogaea HOM05D009636 ORTHO05D011783 4.2e-06 55.5 96 27.1
Gohir.A01G193333 Gossypium hirsutum HOM05D021375 ORTHO05D022808 4.2e-06 55.5 95 30.5
Nitab4.5_0003905g0040 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.2e-06 55.5 87 28.7
arahy.Tifrunner.gnm1.ann1.5MEJ54 Arachis hypogaea HOM05D010482 ORTHO05D000385 5.4e-06 55.1 108 27.8
arahy.Tifrunner.gnm1.ann1.CXU7YK Arachis hypogaea HOM05D010482 ORTHO05D000385 7.1e-06 54.7 108 27.8
CSS0000994 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.1e-06 54.7 70 38.6
Nn1g00481 Nelumbo nucifera HOM05D001309 ORTHO05D000385 7.1e-06 54.7 85 30.6
TWI34G1252 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 7.1e-06 54.7 106 28.3
VMungo0647G1703 Vigna mungo HOM05D002954 ORTHO05D000002 7.1e-06 54.7 110 30.9
vmacro09403 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 9.2e-06 54.3 61 49.2


User provided reference genes

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