Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0188971 Helianthus annuus HOM05D002965 ORTHO05D010536 3.0e-93 345.1 171 100.0
HanXRQMTg0579151 Helianthus annuus HOM05D002965 ORTHO05D010536 7.5e-76 287.3 173 85.0
ECA003G0005 Erigeron canadensis HOM05D002965 ORTHO05D000580 1.1e-53 213.8 172 65.7
ECA039G0005 Erigeron canadensis HOM05D002965 ORTHO05D010536 1.1e-53 213.8 172 65.7
HanXRQChr07g0188961 Helianthus annuus HOM05D002965 ORTHO05D010536 4.6e-49 198.4 120 82.5
HanXRQChr07g0189021 Helianthus annuus HOM05D002965 ORTHO05D010536 1.3e-38 163.7 98 84.7
HanXRQChr10g0297161 Helianthus annuus HOM05D002965 ORTHO05D010536 4.2e-34 148.7 87 87.4
Aqoxy3G01134 Aquilegia oxysepala HOM05D002965 ORTHO05D010536 3.6e-30 135.6 164 50.0
Lj6A7T8 Lonicera japonica HOM05D002965 ORTHO05D010536 8.1e-30 134.4 161 49.7
HanXRQChr05g0134431 Helianthus annuus HOM05D002965 ORTHO05D010536 4.5e-28 128.6 71 94.4
SabraMtG0009900 Salix brachista HOM05D002965 ORTHO05D010536 5.8e-28 128.3 149 50.3
HanXRQChr11g0327841 Helianthus annuus HOM05D002965 ORTHO05D010536 1.7e-27 126.7 71 93.0
AL3G44420 Arabidopsis lyrata HOM05D002965 ORTHO05D010536 6.4e-27 124.8 145 49.7
AT2G07674 Arabidopsis thaliana HOM05D002965 ORTHO05D010536 6.4e-27 124.8 145 49.7
BNapus_Darmor_BZH_scaffold_234p00050 Brassica napus HOM05D002965 ORTHO05D010536 7.1e-26 121.3 153 46.4
BolSC28t60357H Brassica oleracea HOM05D002965 ORTHO05D010536 7.1e-26 121.3 153 46.4
BraSC48t46254Z Brassica rapa HOM05D002965 ORTHO05D010536 7.1e-26 121.3 153 46.4
Glyma.17G186200 Glycine max HOM05D002965 ORTHO05D010536 2.5e-23 112.8 163 43.6
Solyc00g500226.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 9.6e-23 110.9 166 43.4
Solyc00g500262.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 9.6e-23 110.9 166 43.4
ATMG01010 Arabidopsis thaliana HOM05D002965 ORTHO05D010536 1.3e-22 110.5 109 55.0
HanXRQChr02g0035251 Helianthus annuus HOM05D002965 ORTHO05D010536 1.6e-22 110.2 62 88.7
Solyc06g074585.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 2.1e-22 109.8 166 43.4
PGR028G0001 Punica granatum HOM05D002864 ORTHO05D007972 4.8e-22 108.6 136 44.9
Solyc00g500114.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 4.8e-22 108.6 163 43.6
PGSC0003DMG400010573 Solanum tuberosum HOM05D002965 ORTHO05D010536 1.1e-21 107.5 166 42.2
Aa31csc464G20 Aethionema arabicum HOM05D000743 ORTHO05D000580 2.4e-21 106.3 116 49.1
Ca_28560_v3 Cicer arietinum L. HOM05D002965 ORTHO05D010536 2.4e-21 106.3 166 45.8
SalBow1G3342 Salvia bowleyana HOM05D002965 ORTHO05D010536 2.4e-21 106.3 96 56.2
Solyc00g500351.1 Solanum lycopersicum HOM05D002965 ORTHO05D011254 3.1e-21 105.9 168 42.9
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 5.3e-21 105.1 161 42.9
arahy.Tifrunner.gnm1.ann1.8LYJ6L Arachis hypogaea HOM05D004291 ORTHO05D005620 1.2e-20 104.0 124 47.6
arahy.Tifrunner.gnm1.ann1.Y9PUBE Arachis hypogaea HOM05D004291 ORTHO05D005620 1.2e-20 104.0 124 47.6
CARHR283260 Cardamine hirsuta HOM05D002965 ORTHO05D010536 4.5e-20 102.1 119 48.7
PGR028G0005 Punica granatum HOM05D002965 ORTHO05D010536 4.5e-20 102.1 123 48.0
PGR069G0002 Punica granatum HOM05D002965 ORTHO05D010536 4.5e-20 102.1 123 48.0
PGR069G0012 Punica granatum HOM05D002965 ORTHO05D010536 4.5e-20 102.1 123 48.0
PGR069G0018 Punica granatum HOM05D002965 ORTHO05D010536 4.5e-20 102.1 123 48.0
PGR071G0002 Punica granatum HOM05D002965 ORTHO05D010536 4.5e-20 102.1 123 48.0
Psat0s4951g0200 Pisum sativum HOM05D002965 ORTHO05D010812 1.7e-19 100.1 111 52.3
Eucgr.I01860 Eucalyptus grandis HOM05D002965 ORTHO05D010536 1.1e-18 97.4 109 47.7
Thhalv10023135m.g Eutrema salsugineum HOM05D002965 ORTHO05D010536 2.5e-18 96.3 135 44.4
Gohir.D06G053851 Gossypium hirsutum HOM05D002965 ORTHO05D010536 4.2e-18 95.5 80 60.0
Hma1.2p1_0290F.1_g114710 Hydrangea macrophylla HOM05D002965 ORTHO05D010536 1.2e-17 94.0 133 44.4
Hma1.2p1_0290F.1_g114715 Hydrangea macrophylla HOM05D002965 ORTHO05D010536 1.2e-17 94.0 133 44.4
TPR.G28262 Trifolium pratense HOM05D002965 ORTHO05D010536 3.5e-17 92.4 117 46.2
Gorai.013G137600 Gossypium raimondii HOM05D002965 ORTHO05D010536 3.9e-16 89.0 116 49.1
Potri.007G062262 Populus trichocarpa HOM05D002965 ORTHO05D010536 5.7e-15 85.1 65 63.1
EL10Ac5g12181 Beta vulgaris HOM05D002965 ORTHO05D010536 6.2e-14 81.6 90 48.9
Sopen11g024950 Solanum pennellii HOM05D000004 ORTHO05D000002 2.4e-13 79.7 107 43.0
VMungo0251G1451 Vigna mungo HOM05D002965 ORTHO05D010536 9.0e-13 77.8 88 51.1
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea HOM05D005210 ORTHO05D010080 1.7e-11 73.6 67 55.2
arahy.Tifrunner.gnm1.ann1.LH5L6M Arachis hypogaea HOM05D002965 ORTHO05D010536 2.9e-11 72.8 90 44.4
Gorai.001G160200 Gossypium raimondii HOM05D003783 ORTHO05D004568 6.5e-11 71.6 49 67.3
arahy.Tifrunner.gnm1.ann1.N1QJ6Q Arachis hypogaea HOM05D007099 ORTHO05D009081 1.9e-10 70.1 126 38.9
Lalb_Chr00c24g0406881 Lupinus albus HOM05D002965 ORTHO05D010536 2.5e-10 69.7 79 50.6
Sopen11g012750 Solanum pennellii HOM05D002660 ORTHO05D003902 3.2e-10 69.3 74 45.9
Solyc11g045430.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 4.2e-10 68.9 64 51.6
arahy.Tifrunner.gnm1.ann1.5L8EUV Arachis hypogaea HOM05D007099 ORTHO05D009081 9.3e-10 67.8 69 58.0
CAN.G362.38 Capsicum annuum HOM05D002965 ORTHO05D010994 1.2e-09 67.4 68 48.5
Psat0s7112g0120 Pisum sativum HOM05D002965 ORTHO05D010536 1.0e-08 64.3 88 45.5
BcaC05g26887 Brassica carinata HOM05D002965 ORTHO05D010536 2.3e-08 63.2 71 47.9
arahy.Tifrunner.gnm1.ann1.86CJ1T Arachis hypogaea HOM05D004291 ORTHO05D005620 3.0e-08 62.8 164 31.1
arahy.Tifrunner.gnm1.ann1.BT1F12 Arachis hypogaea HOM05D007099 ORTHO05D009081 8.7e-08 61.2 111 42.3
BraSC77t46663Z Brassica rapa HOM05D002965 ORTHO05D010536 5.7e-07 58.5 54 57.4
Solyc00g025300.1 Solanum lycopersicum HOM05D002965 ORTHO05D010536 5.7e-07 58.5 48 56.2
Aa31csc1081G40 Aethionema arabicum HOM05D002965 ORTHO05D010536 7.4e-07 58.2 57 47.4
PGSC0003DMG400040498 Solanum tuberosum HOM05D002965 ORTHO05D010514 9.7e-07 57.8 111 39.6
arahy.Tifrunner.gnm1.ann1.S21A07 Arachis hypogaea HOM05D008923 ORTHO05D011423 3.7e-06 55.8 61 54.1


User provided reference genes

Program Settings