Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr07g0187551 Helianthus annuus HOM05D004673 ORTHO05D005596 5.8e-62 241.1 162 100.0
HanXRQChr13g0405741 Helianthus annuus HOM05D004673 ORTHO05D005596 1.8e-23 113.2 152 69.1
Lsat_1_v5_gn_6_53540 Lactuca sativa HOM05D004673 ORTHO05D005596 2.0e-22 109.8 83 61.4
Lsat_1_v5_gn_6_55380 Lactuca sativa HOM05D004673 ORTHO05D005596 6.5e-21 104.8 81 59.3
Lsat_1_v5_gn_6_55581 Lactuca sativa HOM05D004673 ORTHO05D005596 6.5e-21 104.8 161 65.8
Lsat_1_v5_gn_1_25861 Lactuca sativa HOM05D004673 ORTHO05D005596 1.1e-20 104.0 79 63.3
HanXRQChr13g0405711 Helianthus annuus HOM05D004673 ORTHO05D005596 4.2e-20 102.1 74 63.5
ECA233G4485 Erigeron canadensis HOM05D004673 ORTHO05D005596 9.4e-20 100.9 150 66.7
HanXRQChr07g0187111 Helianthus annuus HOM05D004673 ORTHO05D005596 2.7e-19 99.4 154 66.2
ECA233G4672 Erigeron canadensis HOM05D004673 ORTHO05D005596 6.1e-19 98.2 82 57.3
Lsat_1_v5_gn_6_55460 Lactuca sativa HOM05D004673 ORTHO05D005596 6.8e-18 94.7 163 63.2
Lj2P776T43 Lonicera japonica HOM05D004673 ORTHO05D005596 7.7e-14 81.3 78 52.6
ECA233G2517 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-13 80.9 132 67.4
Lj1P522T31 Lonicera japonica HOM05D004673 ORTHO05D005596 2.9e-13 79.3 75 53.3
CSS0005892 Camellia sinensis var. sinensis HOM05D004673 ORTHO05D005596 6.5e-13 78.2 69 52.2
Nitab4.5_0000551g0010 Nicotiana tabacum HOM05D004673 ORTHO05D005596 1.9e-12 76.6 69 49.3
Cfa009556 Carpinus fangiana HOM05D004673 ORTHO05D005596 7.2e-12 74.7 69 52.2
DCAR_030109 Daucus carota HOM05D004673 ORTHO05D005596 7.2e-12 74.7 68 52.9
DCAR_030114 Daucus carota HOM05D004673 ORTHO05D005596 7.2e-12 74.7 70 52.9
GSVIVG01025477001 Vitis vinifera HOM05D004673 ORTHO05D005596 9.5e-12 74.3 69 52.2
QL01p004071 Quercus lobata HOM05D004673 ORTHO05D005596 1.6e-11 73.6 74 48.6
QL01p004463 Quercus lobata HOM05D004673 ORTHO05D005596 2.1e-11 73.2 150 58.7
Dinv09263 Davidia involucrata HOM05D004673 ORTHO05D005596 6.1e-11 71.6 65 55.4
DCAR_030101 Daucus carota HOM05D004673 ORTHO05D005596 8.0e-11 71.2 77 45.5
DCAR_030100 Daucus carota HOM05D004673 ORTHO05D005596 1.4e-10 70.5 78 44.9
Hma1.2p1_0589F.1_g184830 Hydrangea macrophylla HOM05D004673 ORTHO05D005596 1.8e-10 70.1 70 50.0
Nitab4.5_0006195g0010 Nicotiana tabacum HOM05D004673 ORTHO05D005596 3.0e-10 69.3 70 44.3
Rhsim13G0233200 Rhododendron simsii HOM05D004673 ORTHO05D005596 3.0e-10 69.3 71 49.3
DCAR_030110 Daucus carota HOM05D004673 ORTHO05D005596 4.0e-10 68.9 77 45.5
QL01p004573 Quercus lobata HOM05D004673 ORTHO05D005596 6.8e-10 68.2 69 46.4
Dinv00554 Davidia involucrata HOM05D004673 ORTHO05D005596 8.8e-10 67.8 55 56.4
Peaxi162Scf00705g00063 Petunia axillaris HOM05D004673 ORTHO05D005596 1.2e-09 67.4 162 56.2
DCAR_030102 Daucus carota HOM05D004673 ORTHO05D005596 1.5e-09 67.0 69 49.3
DCAR_030108 Daucus carota HOM05D004673 ORTHO05D005596 1.5e-09 67.0 69 49.3
QL01p016345 Quercus lobata HOM05D004673 ORTHO05D005596 1.5e-09 67.0 69 47.8
DCAR_013113 Daucus carota HOM05D004673 ORTHO05D005596 2.6e-09 66.2 70 45.7
QL02p095991 Quercus lobata HOM05D004673 ORTHO05D005596 2.6e-09 66.2 69 44.9
TWI60G0809 Tripterygium wilfordii HOM05D004673 ORTHO05D005596 2.6e-09 66.2 65 47.7
Atru.chr1.2923 Acer truncatum HOM05D004673 ORTHO05D005596 3.4e-09 65.9 69 40.6
DCAR_030112 Daucus carota HOM05D004673 ORTHO05D005596 3.4e-09 65.9 78 44.9
Sed0024334 Sechium edule HOM05D004673 ORTHO05D005596 3.4e-09 65.9 69 49.3
DCAR_032195 Daucus carota HOM05D004673 ORTHO05D005596 4.4e-09 65.5 79 44.3
QL02p096023 Quercus lobata HOM05D004673 ORTHO05D005596 4.4e-09 65.5 69 44.9
QL01p004552 Quercus lobata HOM05D004673 ORTHO05D005596 5.7e-09 65.1 69 46.4
QL01p016358 Quercus lobata HOM05D004673 ORTHO05D005596 7.5e-09 64.7 69 46.4
TAR623G1034 Trochodendron aralioides HOM05D004673 ORTHO05D005596 9.8e-09 64.3 62 50.0
Haze_22936 Corylus avellana HOM05D004673 ORTHO05D005596 1.3e-08 63.9 69 47.8
MELO3C015573.2 Cucumis melo HOM05D004673 ORTHO05D005596 1.3e-08 63.9 70 51.4
Dinv00553 Davidia involucrata HOM05D004673 ORTHO05D005596 1.3e-08 63.9 55 56.4
QL01p003771 Quercus lobata HOM05D004673 ORTHO05D005596 1.3e-08 63.9 68 47.1
CsaV3_1G041610 Cucumis sativus L. HOM05D004673 ORTHO05D005596 1.7e-08 63.5 71 47.9
DCAR_030979 Daucus carota HOM05D004673 ORTHO05D005596 1.7e-08 63.5 79 43.0
Thecc.05G294400 Theobroma cacao HOM05D004673 ORTHO05D005596 1.7e-08 63.5 72 44.4
Cc01_g00160 Coffea canephora HOM05D004673 ORTHO05D005596 2.2e-08 63.2 74 43.2
Potri.001G003200 Populus trichocarpa HOM05D004673 ORTHO05D005596 2.2e-08 63.2 70 45.7
CsaV3_1G041620 Cucumis sativus L. HOM05D004673 ORTHO05D005596 2.8e-08 62.8 67 50.7
vmacro23200 Vaccinium macrocarpon HOM05D005410 ORTHO05D007394 3.7e-08 62.4 69 49.3
QL08p003638 Quercus lobata HOM05D004673 ORTHO05D005596 8.3e-08 61.2 65 46.2
CAN.G1834.13 Capsicum annuum HOM05D004673 ORTHO05D005596 1.1e-07 60.8 79 39.2
Sabra01G0002300 Salix brachista HOM05D004673 ORTHO05D005596 1.1e-07 60.8 69 42.0
QL01p003522 Quercus lobata HOM05D000182 ORTHO05D005596 1.4e-07 60.5 75 44.0
Aqoxy1G00488 Aquilegia oxysepala HOM05D004673 ORTHO05D005596 1.8e-07 60.1 68 41.2
Manes.03G086906 Manihot esculenta HOM05D004673 ORTHO05D005596 3.1e-07 59.3 71 42.3
QL08p003602 Quercus lobata HOM05D004673 ORTHO05D005596 4.1e-07 58.9 67 44.8
Cpa.g.sc1158.1 Carica papaya HOM05D004673 ORTHO05D005596 7.0e-07 58.2 79 38.0
AUR62032055 Chenopodium quinoa HOM05D004673 ORTHO05D005596 7.0e-07 58.2 71 43.7
Prupe.7G003900 Prunus persica HOM05D004673 ORTHO05D005596 7.0e-07 58.2 68 44.1
ClCG03G014570 Citrullus lanatus HOM05D004673 ORTHO05D005596 9.2e-07 57.8 69 46.4
Ciclev10024612m.g Citrus clementina HOM05D004673 ORTHO05D005596 9.2e-07 57.8 66 43.9
COL.COLO4_13601 Corchorus olitorius HOM05D000750 ORTHO05D000714 1.2e-06 57.4 56 46.4
MELO3C015571.2 Cucumis melo HOM05D004673 ORTHO05D005596 7.7e-06 54.7 71 40.8


User provided reference genes

Program Settings