Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0185111 Helianthus annuus HOM05D007648 ORTHO05D009613 2.9e-42 174.9 92 100.0
Lsat_1_v5_gn_5_1580 Lactuca sativa HOM05D007648 ORTHO05D009613 4.2e-33 144.4 82 89.0
CARHR069590 Cardamine hirsuta HOM05D007648 ORTHO05D009613 4.8e-29 131.0 82 79.3
Carub.0002s2295 Capsella rubella HOM05D007648 ORTHO05D009613 6.3e-29 130.6 82 78.0
Haze_22702 Corylus avellana HOM05D007648 ORTHO05D009613 6.3e-29 130.6 81 81.5
AT1G76065 Arabidopsis thaliana HOM05D007648 ORTHO05D009613 1.1e-28 129.8 80 80.0
TAR625G0376 Trochodendron aralioides HOM05D007648 ORTHO05D009613 4.1e-28 127.9 85 75.3
Thhalv10019391m.g Eutrema salsugineum HOM05D007648 ORTHO05D009613 5.3e-28 127.5 82 79.3
GSVIVG01008741001 Vitis vinifera HOM05D007648 ORTHO05D009613 5.3e-28 127.5 88 72.7
Aa31LG4G6180 Aethionema arabicum HOM05D007648 ORTHO05D009613 7.0e-28 127.1 80 78.8
AL2G36100 Arabidopsis lyrata HOM05D007648 ORTHO05D009613 7.0e-28 127.1 80 78.8
BraA08t32933Z Brassica rapa HOM05D007648 ORTHO05D009613 9.1e-28 126.7 92 70.7
Atru.chr13.217 Acer truncatum HOM05D007648 ORTHO05D009613 1.2e-27 126.3 81 79.0
ECA238G3742 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-27 125.9 74 86.5
Manes.05G142600 Manihot esculenta HOM05D007648 ORTHO05D009613 2.0e-27 125.6 82 78.0
QL02p012929 Quercus lobata HOM05D007648 ORTHO05D009613 3.5e-27 124.8 80 76.2
THA.LOC104811443 Tarenaya hassleriana HOM05D007648 ORTHO05D009613 3.5e-27 124.8 82 74.4
A08p09340 Brassica napus HOM05D007648 ORTHO05D009613 4.5e-27 124.4 92 69.6
Dinv31891 Davidia involucrata HOM05D007648 ORTHO05D009613 7.7e-27 123.6 80 75.0
Ah.00g000660 Amaranthus hybridus HOM05D007648 ORTHO05D009613 1.3e-26 122.9 80 76.2
BolC8t48002H Brassica oleracea HOM05D007648 ORTHO05D009613 1.3e-26 122.9 86 72.1
Hund05152 Selenicereus undatus HOM05D000399 ORTHO05D000304 1.3e-26 122.9 85 69.4
Sc02g0008880 Simmondsia chinensis HOM05D007648 ORTHO05D009613 2.2e-26 122.1 80 73.8
CiPaw.07G143700 Carya illinoinensis HOM05D007648 ORTHO05D009613 2.9e-26 121.7 82 74.4
BcaC07g37632 Brassica carinata HOM05D007648 ORTHO05D009613 3.8e-26 121.3 86 70.9
Sc02g0008840 Simmondsia chinensis HOM05D007648 ORTHO05D009613 3.8e-26 121.3 80 73.8
BcaB07g30075 Brassica carinata HOM05D007648 ORTHO05D009613 5.0e-26 120.9 87 70.1
Ciclev10003012m.g Citrus clementina HOM05D007648 ORTHO05D009613 6.5e-26 120.6 82 73.2
EL10Ac1g02083 Beta vulgaris HOM05D000399 ORTHO05D000304 8.5e-26 120.2 81 76.5
FvH4_2g37960 Fragaria vesca HOM05D007648 ORTHO05D009613 1.9e-25 119.0 80 73.8
Thecc.08G051700 Theobroma cacao HOM05D007648 ORTHO05D009613 1.9e-25 119.0 80 75.0
CSS0030217 Camellia sinensis var. sinensis HOM05D007648 ORTHO05D009613 2.5e-25 118.6 82 73.2
ClCG05G015420 Citrullus lanatus HOM05D007648 ORTHO05D009613 2.5e-25 118.6 80 73.8
RcHm_v2.0_Chr6g0303661 Rosa chinensis HOM05D007648 ORTHO05D009613 2.5e-25 118.6 80 73.8
Actinidia29767 Actinidia chinensis HOM05D007648 ORTHO05D009613 3.2e-25 118.2 83 72.3
arahy.Tifrunner.gnm1.ann1.8I3IQY Arachis hypogaea HOM05D007648 ORTHO05D009613 5.5e-25 117.5 80 75.0
Sabra14G0141300 Salix brachista HOM05D000525 ORTHO05D001368 7.2e-25 117.1 80 73.8
Phvul.001G002600 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 9.4e-25 116.7 79 73.4
FAN15G0474 Fragaria x ananassa HOM05D007648 ORTHO05D009613 1.2e-24 116.3 80 72.5
TWI12G0541 Tripterygium wilfordii HOM05D007648 ORTHO05D009613 1.2e-24 116.3 83 71.1
Duzib093G2040 Durio zibethinus HOM05D007648 ORTHO05D009613 2.1e-24 115.5 82 73.2
arahy.Tifrunner.gnm1.ann1.EILY3I Arachis hypogaea HOM05D007648 ORTHO05D009613 2.7e-24 115.2 77 76.6
Potri.014G181400 Populus trichocarpa HOM05D007648 ORTHO05D009613 2.7e-24 115.2 80 72.5
Sed0006121 Sechium edule HOM05D007648 ORTHO05D009613 3.6e-24 114.8 82 70.7
COL.COLO4_26084 Corchorus olitorius HOM05D007648 ORTHO05D009613 4.7e-24 114.4 80 72.5
FAN20G1741 Fragaria x ananassa HOM05D007648 ORTHO05D009613 4.7e-24 114.4 80 71.2
Aqoxy5G01099 Aquilegia oxysepala HOM05D007648 ORTHO05D009613 6.1e-24 114.0 82 70.7
Phvul.001G002300 Phaseolus vulgaris HOM05D007648 ORTHO05D009613 6.1e-24 114.0 77 72.7
Lj5g0008894 Lotus japonicus HOM05D007648 ORTHO05D009613 1.4e-23 112.8 77 71.4
Rhsim07G0248300 Rhododendron simsii HOM05D007648 ORTHO05D009613 1.4e-23 112.8 85 63.5
Ca_13484_v3 Cicer arietinum L. HOM05D007648 ORTHO05D009613 1.8e-23 112.5 77 74.0
PSO210G3155 Papaver somniferum HOM05D007648 ORTHO05D009613 1.8e-23 112.5 75 73.3
Psat6g001120 Pisum sativum HOM05D007648 ORTHO05D009613 1.8e-23 112.5 77 74.0
Eucgr.F03708 Eucalyptus grandis HOM05D007648 ORTHO05D009613 2.3e-23 112.1 82 68.3
Prupe.1G359500 Prunus persica HOM05D007648 ORTHO05D009613 2.3e-23 112.1 80 66.2
Glyma.17G261200 Glycine max HOM05D007648 ORTHO05D009613 3.0e-23 111.7 75 72.0
Os02g0667000 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 3.0e-23 111.7 80 68.8
Medtr1g026100 Medicago truncatula HOM05D007648 ORTHO05D009613 6.8e-23 110.5 77 71.4
CDE04G2628 Ceratophyllum demersum HOM05D007648 ORTHO05D009613 8.8e-23 110.2 86 66.3
Gohir.D01G035600 Gossypium hirsutum HOM05D007648 ORTHO05D009613 8.8e-23 110.2 75 74.7
Gorai.002G043700 Gossypium raimondii HOM05D007648 ORTHO05D009613 1.2e-22 109.8 75 74.7
vmacro17151 Vaccinium macrocarpon HOM05D007648 ORTHO05D009613 1.2e-22 109.8 84 65.5
BraA02t08664Z Brassica rapa HOM05D007648 ORTHO05D009613 2.0e-22 109.0 75 73.3
MELO3C003728.2 Cucumis melo HOM05D007648 ORTHO05D009613 2.0e-22 109.0 82 67.1
Gohir.A01G044700 Gossypium hirsutum HOM05D007648 ORTHO05D009613 2.0e-22 109.0 75 73.3
MD08G1007600 Malus domestica HOM05D007648 ORTHO05D009613 2.0e-22 109.0 82 65.9
CsaV3_3G046120 Cucumis sativus L. HOM05D007648 ORTHO05D009613 4.4e-22 107.8 82 67.1
Cc10_g01140 Coffea canephora HOM05D007648 ORTHO05D009613 7.5e-22 107.1 81 64.2
VMungo0647G0751 Vigna mungo HOM05D007648 ORTHO05D009613 7.5e-22 107.1 74 70.3
Lalb_Chr19g0131601 Lupinus albus HOM05D007648 ORTHO05D009613 9.8e-22 106.7 77 68.8
MD15G1006800 Malus domestica HOM05D007648 ORTHO05D009613 9.8e-22 106.7 82 63.4
DCAR_021446 Daucus carota HOM05D007648 ORTHO05D009613 1.7e-21 105.9 82 65.9
Rhsim07G0248100 Rhododendron simsii HOM05D007648 ORTHO05D009613 1.7e-21 105.9 77 66.2
Sopen06g017690 Solanum pennellii HOM05D007648 ORTHO05D009613 1.7e-21 105.9 80 63.8
SalBow7G1731 Salvia bowleyana HOM05D007648 ORTHO05D009613 2.2e-21 105.5 82 65.9
HPP92_003481 Vanilla planifolia HOM05D007648 ORTHO05D009613 2.8e-21 105.1 80 63.8
PGSC0003DMG400023820 Solanum tuberosum HOM05D007648 ORTHO05D009613 3.7e-21 104.8 80 62.5
HPP92_026879 Vanilla planifolia HOM05D007648 ORTHO05D009613 4.8e-21 104.4 80 65.0
Migut.C00899 Erythranthe guttata HOM05D007648 ORTHO05D009613 6.3e-21 104.0 79 64.6
CAN.G22.4 Capsicum annuum HOM05D007648 ORTHO05D009613 8.3e-21 103.6 80 60.0
CAN.G22.7 Capsicum annuum HOM05D007648 ORTHO05D009613 4.1e-20 101.3 76 61.8
MBI05_g46751_MAGBIO Magnolia biondii HOM05D007648 ORTHO05D009613 1.2e-19 99.8 72 68.1
BolC2t11627H Brassica oleracea HOM05D007648 ORTHO05D009613 1.0e-18 96.7 82 63.4
AUR62036713 Chenopodium quinoa HOM05D000399 ORTHO05D000304 1.1e-17 93.2 139 43.2
Peaxi162Scf00394g00212 Petunia axillaris HOM05D007648 ORTHO05D009613 2.5e-17 92.0 84 59.5
Nitab4.5_0004193g0030 Nicotiana tabacum HOM05D000998 ORTHO05D000806 4.2e-17 91.3 64 65.6
C02p55750 Brassica napus HOM05D007648 ORTHO05D009613 1.2e-16 89.7 70 62.9
A02p36690 Brassica napus HOM05D007648 ORTHO05D009613 1.8e-15 85.9 60 70.0
Nitab4.5_0000716g0050 Nicotiana tabacum HOM05D000998 ORTHO05D000806 4.0e-15 84.7 59 66.1
Mapoly0088s0028 Marchantia polymorpha HOM05D007648 ORTHO05D009613 2.0e-14 82.4 79 51.9
AagrBONN_evm.TU.Sc2ySwM_344.3278 Anthoceros agrestis HOM05D007648 ORTHO05D009613 8.3e-13 77.0 75 50.7
Pp3c8_20950 Physcomitrium patens HOM05D007648 ORTHO05D009613 2.4e-12 75.5 75 50.7
AUR62013884 Chenopodium quinoa HOM05D007648 ORTHO05D009613 2.0e-11 72.4 44 79.5
Os03g0159800 Oryza sativa ssp. japonica HOM05D007648 ORTHO05D009613 2.3e-10 68.9 44 72.7
unitig_748.g7721 Utricularia gibba HOM05D007648 ORTHO05D009613 3.6e-08 61.6 46 60.9
SalBow1G6040 Salvia bowleyana HOM05D038733 ORTHO05D009613 4.7e-08 61.2 46 65.2
SalBow7G3523 Salvia bowleyana HOM05D038733 ORTHO05D009613 4.7e-08 61.2 46 65.2
Actinidia37950 Actinidia chinensis HOM05D007648 ORTHO05D009613 8.0e-08 60.5 38 73.7


User provided reference genes

Program Settings