Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0184831 Helianthus annuus HOM05D000041 ORTHO05D222641 5.1e-309 1063.5 521 100.0
HanXRQChr16g0511671 Helianthus annuus HOM05D000041 ORTHO05D035134 6.1e-169 598.2 520 60.8
ECA247G0698 Erigeron canadensis HOM05D000041 ORTHO05D035134 3.9e-83 313.2 554 37.4
ECA247G2178 Erigeron canadensis HOM05D000041 ORTHO05D035134 2.8e-81 307.0 557 37.2
Lsat_1_v5_gn_6_116861 Lactuca sativa HOM05D000041 ORTHO05D000452 1.8e-59 234.6 419 38.2
HanXRQChr13g0411691 Helianthus annuus HOM05D000041 ORTHO05D000452 3.1e-40 170.6 460 32.6
HanXRQChr13g0412611 Helianthus annuus HOM05D000041 ORTHO05D019105 9.1e-40 169.1 432 29.6
Lsat_1_v5_gn_9_120080 Lactuca sativa HOM05D000041 ORTHO05D000452 1.2e-39 168.7 450 32.2
HanXRQChr03g0081541 Helianthus annuus HOM05D000041 ORTHO05D000452 2.6e-39 167.5 430 31.2
ECA240G0011 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.9e-38 164.1 527 29.6
HanXRQChr13g0412491 Helianthus annuus HOM05D000041 ORTHO05D000452 5.0e-38 163.3 446 30.9
HanXRQChr13g0414981 Helianthus annuus HOM05D000041 ORTHO05D019105 1.9e-37 161.4 410 32.0
HanXRQChr03g0082641 Helianthus annuus HOM05D000041 ORTHO05D000452 2.7e-36 157.5 426 31.5
ECA240G3017 Erigeron canadensis HOM05D000041 ORTHO05D019105 1.4e-35 155.2 419 30.8
Lsat_1_v5_gn_6_74900 Lactuca sativa HOM05D000041 ORTHO05D000452 3.0e-35 154.1 449 31.2
ECA246G2018 Erigeron canadensis HOM05D000653 ORTHO05D002177 6.7e-35 152.9 430 30.7
Lsat_1_v5_gn_5_62941 Lactuca sativa HOM05D000041 ORTHO05D000452 1.5e-34 151.8 439 30.1
HanXRQChr11g0351471 Helianthus annuus HOM05D000041 ORTHO05D000452 7.4e-34 149.4 447 30.0
HanXRQChr11g0351481 Helianthus annuus HOM05D000041 ORTHO05D000452 9.7e-34 149.1 446 29.4
HanXRQChr15g0488531 Helianthus annuus HOM05D000041 ORTHO05D019105 2.8e-33 147.5 413 30.5
Lsat_1_v5_gn_5_58101 Lactuca sativa HOM05D000041 ORTHO05D000452 8.2e-33 146.0 425 30.1
HanXRQChr13g0412391 Helianthus annuus HOM05D000041 ORTHO05D019105 7.0e-32 142.9 429 30.3
HanXRQChr03g0082621 Helianthus annuus HOM05D000041 ORTHO05D000452 2.6e-31 141.0 426 29.3
Lsat_1_v5_gn_5_62501 Lactuca sativa HOM05D000041 ORTHO05D000452 3.5e-31 140.6 494 30.0
ECA247G0243 Erigeron canadensis HOM05D000041 ORTHO05D000452 4.5e-31 140.2 438 30.1
HanXRQChr13g0412321 Helianthus annuus HOM05D000041 ORTHO05D000452 4.5e-31 140.2 488 27.9
Lsat_1_v5_gn_5_58161 Lactuca sativa HOM05D000041 ORTHO05D000452 4.5e-31 140.2 422 30.8
ECA234G0168 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.8e-30 137.1 421 31.1
Lsat_1_v5_gn_3_25621 Lactuca sativa HOM05D000041 ORTHO05D000452 3.8e-30 137.1 465 27.7
HanXRQChr03g0084761 Helianthus annuus HOM05D000041 ORTHO05D045244 8.5e-30 136.0 466 28.8
Lsat_1_v5_gn_6_74981 Lactuca sativa HOM05D000041 ORTHO05D000452 8.5e-30 136.0 444 30.6
Lsat_1_v5_gn_5_54000 Lactuca sativa HOM05D000041 ORTHO05D000452 1.9e-29 134.8 373 31.4
Lsat_1_v5_gn_5_61781 Lactuca sativa HOM05D000041 ORTHO05D000452 7.2e-29 132.9 457 30.0
ECA233G3668 Erigeron canadensis HOM05D000041 ORTHO05D035163 2.7e-28 131.0 432 28.7
Lsat_1_v5_gn_6_77540 Lactuca sativa HOM05D000041 ORTHO05D000452 1.0e-27 129.0 448 27.7
HanXRQChr01g0001411 Helianthus annuus HOM05D000041 ORTHO05D000452 1.4e-27 128.6 445 28.1
HanXRQChr10g0317381 Helianthus annuus HOM05D000041 ORTHO05D000452 1.8e-27 128.3 451 28.2
ECA240G1761 Erigeron canadensis HOM05D000041 ORTHO05D045244 2.3e-27 127.9 464 28.2
HanXRQChr01g0030061 Helianthus annuus HOM05D000041 ORTHO05D000452 2.3e-27 127.9 465 25.4
ECA240G2299 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.0e-27 127.5 497 26.0
Lsat_1_v5_gn_3_38200 Lactuca sativa HOM05D000041 ORTHO05D000452 3.0e-27 127.5 455 27.7
Lsat_1_v5_gn_5_32001 Lactuca sativa HOM05D000041 ORTHO05D000452 1.5e-26 125.2 442 26.7
HanXRQChr13g0404621 Helianthus annuus HOM05D000041 ORTHO05D019105 3.3e-26 124.0 453 28.7
ECA240G1369 Erigeron canadensis HOM05D000041 ORTHO05D022526 1.3e-25 122.1 461 26.0
HanXRQChr01g0030301 Helianthus annuus HOM05D000041 ORTHO05D000452 8.2e-25 119.4 460 28.0
ECA233G5236 Erigeron canadensis HOM05D000006 ORTHO05D022526 1.8e-24 118.2 378 26.7
HanXRQChr13g0412521 Helianthus annuus HOM05D000041 ORTHO05D019105 1.8e-24 118.2 312 31.4
Lsat_1_v5_gn_5_61840 Lactuca sativa HOM05D000041 ORTHO05D000452 3.1e-24 117.5 460 26.3
ECA247G1154 Erigeron canadensis HOM05D000041 ORTHO05D022526 4.1e-24 117.1 356 27.0
HanXRQChr01g0001421 Helianthus annuus HOM05D000041 ORTHO05D000452 5.3e-24 116.7 444 26.4
Lsat_1_v5_gn_6_75361 Lactuca sativa HOM05D000041 ORTHO05D000452 1.6e-23 115.2 310 32.9
Lsat_1_v5_gn_1_44000 Lactuca sativa HOM05D000041 ORTHO05D000452 2.7e-23 114.4 439 25.5
ECA238G4845 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.5e-23 114.0 449 25.4
Lsat_1_v5_gn_9_122720 Lactuca sativa HOM05D000041 ORTHO05D022526 3.5e-23 114.0 429 25.9
ECA234G3463 Erigeron canadensis HOM05D000041 ORTHO05D015639 2.2e-22 111.3 446 27.1
ECA246G4484 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.2e-22 111.3 449 26.3
HanXRQChr11g0347381 Helianthus annuus HOM05D000041 ORTHO05D000452 3.8e-22 110.5 438 26.9
ECA240G2224 Erigeron canadensis HOM05D000041 ORTHO05D000452 5.0e-22 110.2 412 26.5
HanXRQChr11g0347721 Helianthus annuus HOM05D000041 ORTHO05D000452 6.5e-22 109.8 470 25.1
Lsat_1_v5_gn_5_61540 Lactuca sativa HOM05D000041 ORTHO05D000452 8.5e-22 109.4 296 30.4
HanXRQChr14g0439681 Helianthus annuus HOM05D000041 ORTHO05D045248 1.5e-21 108.6 451 25.5
ECA236G3795 Erigeron canadensis HOM05D000006 ORTHO05D000452 1.9e-21 108.2 456 25.9
ECA238G3405 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.9e-21 108.2 405 24.0
Lsat_1_v5_gn_5_58120 Lactuca sativa HOM05D000041 ORTHO05D000452 2.5e-21 107.8 268 30.6
HanXRQChr13g0404731 Helianthus annuus HOM05D000041 ORTHO05D000452 5.5e-21 106.7 215 32.6
Lsat_1_v5_gn_3_25601 Lactuca sativa HOM05D000248 ORTHO05D000146 9.4e-21 105.9 380 27.9
ECA248G2291 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.6e-20 105.1 453 26.9
Lsat_1_v5_gn_1_42841 Lactuca sativa HOM05D000041 ORTHO05D000452 2.1e-20 104.8 418 27.0
HanXRQChr11g0347871 Helianthus annuus HOM05D000248 ORTHO05D015639 4.7e-20 103.6 472 25.8
Lsat_1_v5_gn_5_54260 Lactuca sativa HOM05D000041 ORTHO05D000452 4.7e-20 103.6 448 25.2
ECA248G2777 Erigeron canadensis HOM05D004140 ORTHO05D000452 6.1e-20 103.2 431 26.5
ECA248G1289 Erigeron canadensis HOM05D000041 ORTHO05D015639 1.0e-19 102.4 381 28.3
HanXRQChr06g0179481 Helianthus annuus HOM05D000041 ORTHO05D000452 1.8e-19 101.7 268 31.3
Lsat_1_v5_gn_9_120221 Lactuca sativa HOM05D000041 ORTHO05D000452 2.3e-19 101.3 290 29.7
ECA238G0060 Erigeron canadensis HOM05D000041 ORTHO05D045248 5.2e-19 100.1 436 25.7
HanXRQChr03g0078601 Helianthus annuus HOM05D000248 ORTHO05D000146 5.2e-19 100.1 353 24.9
ECA248G3439 Erigeron canadensis HOM05D000191 ORTHO05D000452 6.8e-19 99.8 384 25.0
ECA248G2373 Erigeron canadensis HOM05D000041 ORTHO05D015639 8.8e-19 99.4 445 26.3
HanXRQChr14g0437671 Helianthus annuus HOM05D000041 ORTHO05D000452 1.2e-18 99.0 456 24.8
ECA233G1671 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.4e-18 97.4 301 29.9
ECA246G2684 Erigeron canadensis HOM05D000041 ORTHO05D000452 7.5e-18 96.3 374 26.2
ECA247G4136 Erigeron canadensis HOM05D000041 ORTHO05D000452 9.8e-18 95.9 385 27.3
HanXRQChr02g0057341 Helianthus annuus HOM05D000041 ORTHO05D000452 9.8e-18 95.9 437 25.4
ECA240G4507 Erigeron canadensis HOM05D000041 ORTHO05D000452 6.3e-17 93.2 368 26.6
Cfa006659 Carpinus fangiana HOM05D000248 ORTHO05D000146 1.1e-16 92.4 462 24.9
HanXRQChr11g0347731 Helianthus annuus HOM05D000248 ORTHO05D015639 1.1e-16 92.4 388 25.8
HanXRQChr01g0001391 Helianthus annuus HOM05D000041 ORTHO05D000452 1.4e-16 92.0 361 26.0
Lsat_1_v5_gn_6_17600 Lactuca sativa HOM05D000041 ORTHO05D035163 3.1e-16 90.9 272 30.1
HanXRQChr14g0437841 Helianthus annuus HOM05D000041 ORTHO05D000452 7.7e-15 86.3 532 23.7
ECA240G0245 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.0e-14 85.9 356 26.4
ECA240G1740 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.0e-14 85.9 445 25.6
ECA240G2724 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.0e-14 85.9 289 26.3
HanXRQChr05g0136981 Helianthus annuus HOM05D000041 ORTHO05D000452 1.5e-13 82.0 215 32.6
Cc03_g07480 Coffea canephora HOM05D000248 ORTHO05D000146 5.5e-13 80.1 261 27.6
Lsat_1_v5_gn_6_77361 Lactuca sativa HOM05D000041 ORTHO05D000452 5.5e-13 80.1 213 32.4
ECA248G3842 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.2e-12 79.0 497 25.2
ECA248G3832 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.4e-11 75.5 218 29.4
Aqoxy2G02884 Aquilegia oxysepala HOM05D000248 ORTHO05D000146 1.8e-11 75.1 230 29.6
Ciclev10002074m.g Citrus clementina HOM05D000248 ORTHO05D000146 1.8e-11 75.1 225 28.0
Actinidia11401 Actinidia chinensis HOM05D000248 ORTHO05D000146 2.3e-11 74.7 391 24.3
ECA238G2692 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.3e-11 74.7 439 23.7
Lj3A551T30 Lonicera japonica HOM05D000248 ORTHO05D000146 4.0e-11 73.9 228 27.6
CAN.G500.53 Capsicum annuum HOM05D000248 ORTHO05D000146 5.2e-11 73.6 228 26.8
ECA233G0265 Erigeron canadensis HOM05D000006 ORTHO05D001423 8.8e-11 72.8 309 22.3
QL09p029398 Quercus lobata HOM05D000248 ORTHO05D000146 1.2e-10 72.4 238 27.3
vmacro15739 Vaccinium macrocarpon HOM05D000248 ORTHO05D000146 1.2e-10 72.4 238 25.6
ECA234G2515 Erigeron canadensis HOM05D000041 ORTHO05D015639 1.5e-10 72.0 333 25.8
vmacro15737 Vaccinium macrocarpon HOM05D000248 ORTHO05D000146 2.0e-10 71.6 218 28.0
BcaB07g30345 Brassica carinata HOM05D000248 ORTHO05D000146 3.4e-10 70.9 249 25.7
vmacro15738 Vaccinium macrocarpon HOM05D000248 ORTHO05D000146 4.4e-10 70.5 238 26.5
AT2G02250 Arabidopsis thaliana HOM05D000248 ORTHO05D000146 1.7e-09 68.6 227 26.9
ECA248G3694 Erigeron canadensis HOM05D000041 ORTHO05D045257 2.2e-09 68.2 437 23.6
QL09p029313 Quercus lobata HOM05D000248 ORTHO05D000146 3.7e-09 67.4 300 25.3
TPR.G1604 Trifolium pratense HOM05D000248 ORTHO05D000146 6.3e-09 66.6 232 25.0
HanXRQChr14g0433781 Helianthus annuus HOM05D000041 ORTHO05D045257 1.1e-08 65.9 178 33.1
ECA240G0401 Erigeron canadensis HOM05D000041 ORTHO05D025303 1.4e-08 65.5 164 31.1
ECA240G2908 Erigeron canadensis HOM05D000041 ORTHO05D000452 1.4e-08 65.5 285 23.9
Lsat_1_v5_gn_1_42681 Lactuca sativa HOM05D000041 ORTHO05D015639 1.4e-08 65.5 402 24.9
Lsat_1_v5_gn_9_112541 Lactuca sativa HOM05D000716 ORTHO05D002658 1.4e-08 65.5 223 27.4
Duzib106G1323 Durio zibethinus HOM05D000248 ORTHO05D000146 1.8e-08 65.1 232 27.2
ECA236G3738 Erigeron canadensis HOM05D000248 ORTHO05D000146 1.8e-08 65.1 239 25.5
Peaxi162Scf00047g00921 Petunia axillaris HOM05D000248 ORTHO05D000146 1.8e-08 65.1 245 24.5
Rhsim09G0053400 Rhododendron simsii HOM05D000248 ORTHO05D000146 1.8e-08 65.1 236 25.8
BraA06t27249Z Brassica rapa HOM05D000248 ORTHO05D000146 2.4e-08 64.7 221 24.9
ECA234G3860 Erigeron canadensis HOM05D000041 ORTHO05D015639 2.4e-08 64.7 363 23.1
HanXRQChr07g0201141 Helianthus annuus HOM05D063110 ORTHO05D225272 2.4e-08 64.7 150 33.3
ECA240G3064 Erigeron canadensis HOM05D000041 ORTHO05D000452 3.1e-08 64.3 342 24.3
Migut.G00461 Erythranthe guttata HOM05D000248 ORTHO05D000146 3.1e-08 64.3 232 28.4
Hma1.2p1_0691F.1_g204090 Hydrangea macrophylla HOM05D000248 ORTHO05D000146 4.1e-08 63.9 238 23.5
CAN.G706.7 Capsicum annuum HOM05D000248 ORTHO05D000146 5.4e-08 63.5 223 26.5
Gohir.D04G026800 Gossypium hirsutum HOM05D000248 ORTHO05D000146 5.4e-08 63.5 459 23.7
AT2G02360 Arabidopsis thaliana HOM05D000248 ORTHO05D000146 9.2e-08 62.8 222 24.8
MELO3C029518.2 Cucumis melo HOM05D000248 ORTHO05D000146 9.2e-08 62.8 224 28.1
ECA247G1207 Erigeron canadensis HOM05D000041 ORTHO05D000452 9.2e-08 62.8 299 24.7
Lj3C557T1 Lonicera japonica HOM05D000248 ORTHO05D000146 1.2e-07 62.4 226 23.5
Oeu013971.2 Olea europaea HOM05D000248 ORTHO05D000146 1.2e-07 62.4 246 23.6
HanXRQChr17g0546281 Helianthus annuus HOM05D000041 ORTHO05D000146 1.6e-07 62.0 311 24.1
Lsat_1_v5_gn_1_42621 Lactuca sativa HOM05D000041 ORTHO05D000452 1.6e-07 62.0 139 29.5
Lj3A568T35 Lonicera japonica HOM05D000248 ORTHO05D000146 1.6e-07 62.0 229 24.9
ECA240G0449 Erigeron canadensis HOM05D000041 ORTHO05D000452 2.0e-07 61.6 176 25.6
Lsat_1_v5_gn_2_44341 Lactuca sativa HOM05D000248 ORTHO05D000146 2.0e-07 61.6 225 24.9
QL09p029257 Quercus lobata HOM05D000248 ORTHO05D000146 2.0e-07 61.6 219 27.4
QL09p029368 Quercus lobata HOM05D000248 ORTHO05D000146 2.0e-07 61.6 169 26.6
CsaV3_1G031350 Cucumis sativus L. HOM05D000248 ORTHO05D000146 2.7e-07 61.2 231 24.7
Lsat_1_v5_gn_6_77500 Lactuca sativa HOM05D000041 ORTHO05D000452 3.5e-07 60.8 135 31.1
DCAR_006827 Daucus carota HOM05D000248 ORTHO05D000146 4.5e-07 60.5 294 25.9
THA.LOC104805903 Tarenaya hassleriana HOM05D000248 ORTHO05D000146 4.5e-07 60.5 226 27.0
Lsat_1_v5_gn_1_42641 Lactuca sativa HOM05D000041 ORTHO05D000452 5.9e-07 60.1 156 28.8
Os12g0129700 Oryza sativa ssp. japonica HOM05D000248 ORTHO05D000146 5.9e-07 60.1 236 25.8
ECA240G0330 Erigeron canadensis HOM05D000041 ORTHO05D000452 7.7e-07 59.7 127 33.9
Hma1.2p1_0691F.1_g204080 Hydrangea macrophylla HOM05D000248 ORTHO05D000146 7.7e-07 59.7 228 25.0
Rhsim09G0053000 Rhododendron simsii HOM05D000248 ORTHO05D000146 7.7e-07 59.7 221 25.8
CAN.G1273.32 Capsicum annuum HOM05D000248 ORTHO05D000146 1.0e-06 59.3 211 26.5
Nitab4.5_0006355g0030 Nicotiana tabacum HOM05D000248 ORTHO05D000146 1.0e-06 59.3 233 26.2
PGSC0003DMG400016861 Solanum tuberosum HOM05D000248 ORTHO05D000146 1.0e-06 59.3 223 26.0
Lj3A557T51 Lonicera japonica HOM05D000248 ORTHO05D000146 1.3e-06 58.9 227 24.2
AT2G02340 Arabidopsis thaliana HOM05D000248 ORTHO05D000146 1.7e-06 58.5 232 22.8
Carub.0005s0139 Capsella rubella HOM05D000248 ORTHO05D000146 1.7e-06 58.5 232 23.7
AL5G11560 Arabidopsis lyrata HOM05D000248 ORTHO05D000146 2.3e-06 58.2 227 25.1
arahy.Tifrunner.gnm1.ann1.IM6RX7 Arachis hypogaea HOM05D000248 ORTHO05D000146 2.3e-06 58.2 246 25.2
EL10Ac4g09807 Beta vulgaris HOM05D000248 ORTHO05D000146 2.3e-06 58.2 221 26.2
DCAR_024332 Daucus carota HOM05D000248 ORTHO05D000146 2.9e-06 57.8 241 22.8
HanXRQChr01g0022731 Helianthus annuus HOM05D000248 ORTHO05D000146 2.9e-06 57.8 243 26.3
Nitab4.5_0000676g0270 Nicotiana tabacum HOM05D000248 ORTHO05D000146 2.9e-06 57.8 227 25.1
FvH4_6g06890 Fragaria vesca HOM05D000248 ORTHO05D000146 3.8e-06 57.4 249 26.5
Migut.G00464 Erythranthe guttata HOM05D000248 ORTHO05D000146 5.0e-06 57.0 228 27.2
Lj3A569T40 Lonicera japonica HOM05D000248 ORTHO05D000146 5.0e-06 57.0 227 24.2
Migut.G00666 Erythranthe guttata HOM05D000248 ORTHO05D000146 6.6e-06 56.6 289 21.1
Psat6g151440 Pisum sativum HOM05D000248 ORTHO05D000146 8.6e-06 56.2 257 24.5
QL03p019080 Quercus lobata HOM05D000248 ORTHO05D000146 8.6e-06 56.2 241 24.1


User provided reference genes

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