Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0184631 Helianthus annuus HOM05D000256 ORTHO05D000119 1.3e-87 326.2 152 100.0
HanXRQChr12g0374561 Helianthus annuus HOM05D000256 ORTHO05D000119 2.3e-52 209.1 150 62.0
HanXRQChr10g0295941 Helianthus annuus HOM05D000256 ORTHO05D000119 5.3e-33 144.8 126 51.6
HanXRQChr10g0281411 Helianthus annuus HOM05D000256 ORTHO05D000119 7.2e-30 134.4 139 46.0
HanXRQChr17g0541971 Helianthus annuus HOM05D010440 ORTHO05D000119 1.1e-14 84.0 145 31.0
Lsat_1_v5_gn_5_89960 Lactuca sativa HOM05D000256 ORTHO05D000119 5.6e-14 81.6 128 36.7
Lsat_1_v5_gn_5_76220 Lactuca sativa HOM05D010440 ORTHO05D000119 9.5e-14 80.9 109 36.7
Lsat_1_v5_gn_5_82000 Lactuca sativa HOM05D010440 ORTHO05D000119 2.8e-13 79.3 131 35.9
HanXRQChr17g0542011 Helianthus annuus HOM05D010440 ORTHO05D000119 4.7e-13 78.6 123 31.7
Sopen09g035010 Solanum pennellii HOM05D000256 ORTHO05D000119 1.8e-12 76.6 94 39.4
HanXRQChr17g0542021 Helianthus annuus HOM05D010440 ORTHO05D000119 8.9e-12 74.3 121 29.8
Lsat_1_v5_gn_5_76600 Lactuca sativa HOM05D010440 ORTHO05D000119 7.5e-11 71.2 135 30.4
unitig_899.g15048 Utricularia gibba HOM05D000256 ORTHO05D000119 6.4e-10 68.2 151 33.8
Oeu009572.1 Olea europaea HOM05D000256 ORTHO05D000119 8.3e-10 67.8 128 36.7
SGA_v2.0_scaffold114G31929 Striga asiatica HOM05D000256 ORTHO05D000119 8.3e-10 67.8 103 34.0
unitig_899.g15047 Utricularia gibba HOM05D000256 ORTHO05D000119 8.3e-10 67.8 147 31.3
HanXRQChr07g0197701 Helianthus annuus HOM05D000256 ORTHO05D000119 1.1e-09 67.4 121 33.9
Lsat_1_v5_gn_5_76320 Lactuca sativa HOM05D010440 ORTHO05D000119 1.4e-09 67.0 101 32.7
CAN.G194.33 Capsicum annuum HOM05D000256 ORTHO05D000119 1.8e-09 66.6 123 30.9
HanXRQChr10g0309341 Helianthus annuus HOM05D000256 ORTHO05D000119 2.4e-09 66.2 103 35.0
Lsat_1_v5_gn_3_37180 Lactuca sativa HOM05D010440 ORTHO05D000119 2.4e-09 66.2 95 31.6
Lsat_1_v5_gn_3_37240 Lactuca sativa HOM05D010440 ORTHO05D000119 2.4e-09 66.2 101 34.7
SGA_v2.0_scaffold329G48834 Striga asiatica HOM05D000256 ORTHO05D000119 2.4e-09 66.2 121 32.2
HanXRQChr07g0197691 Helianthus annuus HOM05D000256 ORTHO05D000119 3.2e-09 65.9 121 33.1
Peaxi162Scf00047g01539 Petunia axillaris HOM05D000256 ORTHO05D000119 4.1e-09 65.5 112 32.1
CAN.G194.30 Capsicum annuum HOM05D000256 ORTHO05D000119 5.4e-09 65.1 125 30.4
HanXRQChr10g0311181 Helianthus annuus HOM05D000256 ORTHO05D000119 5.4e-09 65.1 139 32.4
Nitab4.5_0000401g0200 Nicotiana tabacum HOM05D000256 ORTHO05D000119 5.4e-09 65.1 132 28.8
SalBow7G2914 Salvia bowleyana HOM05D000256 ORTHO05D000119 5.4e-09 65.1 104 36.5
Migut.C00644 Erythranthe guttata HOM05D000256 ORTHO05D000119 7.0e-09 64.7 124 32.3
HanXRQChr07g0197601 Helianthus annuus HOM05D000256 ORTHO05D000119 7.0e-09 64.7 139 32.4
HanXRQChr17g0542001 Helianthus annuus HOM05D010440 ORTHO05D000119 7.0e-09 64.7 99 30.3
DCAR_002288 Daucus carota HOM05D000256 ORTHO05D000119 9.2e-09 64.3 137 31.4
HanXRQChr03g0067601 Helianthus annuus HOM05D000256 ORTHO05D000119 9.2e-09 64.3 120 32.5
SalBow4G2587 Salvia bowleyana HOM05D000256 ORTHO05D000119 9.2e-09 64.3 87 35.6
CAN.G1155.35 Capsicum annuum HOM05D000256 ORTHO05D000119 1.2e-08 63.9 142 31.0
unitig_899.g15051 Utricularia gibba HOM05D000256 ORTHO05D000119 1.2e-08 63.9 143 26.6
Lsat_1_v5_gn_9_62781 Lactuca sativa HOM05D010440 ORTHO05D000119 1.6e-08 63.5 122 28.7
HanXRQChr02g0059401 Helianthus annuus HOM05D000256 ORTHO05D000119 2.0e-08 63.2 95 30.5
HanXRQChr08g0222081 Helianthus annuus HOM05D000256 ORTHO05D000119 2.0e-08 63.2 117 34.2
Hma1.2p1_0146F.1_g065590 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 2.0e-08 63.2 111 34.2
Lsat_1_v5_gn_5_81281 Lactuca sativa HOM05D010440 ORTHO05D000119 2.0e-08 63.2 129 32.6
CAN.G194.35 Capsicum annuum HOM05D000256 ORTHO05D000119 2.7e-08 62.8 103 32.0
Nn1g03102 Nelumbo nucifera HOM05D000256 ORTHO05D000119 2.7e-08 62.8 93 32.3
Hma1.2p1_1359F.1_g278050 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 3.5e-08 62.4 120 33.3
SalBow4G1538 Salvia bowleyana HOM05D000256 ORTHO05D000119 3.5e-08 62.4 113 38.1
Hma1.2p1_0453F.1_g156140 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 4.6e-08 62.0 150 28.0
Lsat_1_v5_gn_5_86860 Lactuca sativa HOM05D010440 ORTHO05D000119 4.6e-08 62.0 101 33.7
SalBow1G3274 Salvia bowleyana HOM05D000256 ORTHO05D000119 4.6e-08 62.0 113 29.2
Oeu008822.1 Olea europaea HOM05D000256 ORTHO05D000119 7.8e-08 61.2 82 35.4
SalBow4G3236 Salvia bowleyana HOM05D000256 ORTHO05D000119 7.8e-08 61.2 121 36.4
Sopen08g001640 Solanum pennellii HOM05D000256 ORTHO05D000119 7.8e-08 61.2 96 35.4
SalBow1G1335 Salvia bowleyana HOM05D000256 ORTHO05D000119 1.0e-07 60.8 113 29.2
SGA_v2.0_scaffold13G06375 Striga asiatica HOM05D000256 ORTHO05D000119 1.0e-07 60.8 123 31.7
SalBow7G0504 Salvia bowleyana HOM05D000256 ORTHO05D000119 1.3e-07 60.5 130 29.2
SalBow7G1990 Salvia bowleyana HOM05D000256 ORTHO05D000119 1.3e-07 60.5 130 29.2
CsaV3_3G028160 Cucumis sativus L. HOM05D000256 ORTHO05D000119 1.7e-07 60.1 96 37.5
Oeu028457.1 Olea europaea HOM05D000256 ORTHO05D000119 1.7e-07 60.1 125 30.4
PGSC0003DMG400038419 Solanum tuberosum HOM05D000256 ORTHO05D000119 1.7e-07 60.1 97 37.1
CAN.G250.1 Capsicum annuum HOM05D000256 ORTHO05D000119 2.3e-07 59.7 105 26.7
Hma1.2p1_1359F.1_g278080 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 2.3e-07 59.7 132 28.8
Oeu031136.1 Olea europaea HOM05D000256 ORTHO05D000119 2.3e-07 59.7 144 27.8
Migut.F01927 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.0e-07 59.3 128 25.8
Migut.F01941 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.0e-07 59.3 82 35.4
Lsat_1_v5_gn_7_65441 Lactuca sativa HOM05D000256 ORTHO05D000119 3.0e-07 59.3 109 28.4
SalBow1G3303 Salvia bowleyana HOM05D000256 ORTHO05D000119 3.0e-07 59.3 116 31.0
SalBow7G2474 Salvia bowleyana HOM05D000256 ORTHO05D000119 3.0e-07 59.3 116 31.0
Migut.F01744 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.9e-07 58.9 98 36.7
Nitab4.5_0000401g0130 Nicotiana tabacum HOM05D000256 ORTHO05D000119 3.9e-07 58.9 69 40.6
Hma1.2p1_0903F.1_g234940 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 5.0e-07 58.5 133 27.8
Lsat_1_v5_gn_0_4660 Lactuca sativa HOM05D000256 ORTHO05D000119 5.0e-07 58.5 126 30.2
THA.LOC104816675 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 5.0e-07 58.5 103 29.1
Hma1.2p1_0218F.1_g092320 Hydrangea macrophylla HOM05D000256 ORTHO05D000119 6.6e-07 58.2 142 26.8
Lsat_1_v5_gn_6_61461 Lactuca sativa HOM05D000256 ORTHO05D000119 6.6e-07 58.2 114 27.2
Nitab4.5_0000401g0140 Nicotiana tabacum HOM05D000256 ORTHO05D000119 6.6e-07 58.2 101 32.7
SGA_v2.0_scaffold1G00732 Striga asiatica HOM05D000256 ORTHO05D000119 6.6e-07 58.2 120 28.3
SGA_v2.0_scaffold57G20177 Striga asiatica HOM05D005430 ORTHO05D000119 6.6e-07 58.2 137 29.2
Thecc.04G215700 Theobroma cacao HOM05D005430 ORTHO05D007814 6.6e-07 58.2 98 34.7
Oeu022154.1 Olea europaea HOM05D000256 ORTHO05D000119 8.6e-07 57.8 122 26.2
Oeu062945.1 Olea europaea HOM05D000256 ORTHO05D000119 8.6e-07 57.8 85 34.1
Solyc09g011100.1 Solanum lycopersicum HOM05D000256 ORTHO05D000119 8.6e-07 57.8 130 26.9
TWI59G0765 Tripterygium wilfordii HOM05D000256 ORTHO05D000119 8.6e-07 57.8 114 31.6
Migut.F01939 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.1e-06 57.4 107 29.9
Migut.F01940 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.1e-06 57.4 96 31.2
Hma1.2p1_0146F.1_g065570 Hydrangea macrophylla HOM05D005430 ORTHO05D000119 1.1e-06 57.4 141 29.8
Sed0027955 Sechium edule HOM05D000256 ORTHO05D000119 1.1e-06 57.4 104 32.7
Sopen10g036010 Solanum pennellii HOM05D000256 ORTHO05D000119 1.1e-06 57.4 123 26.0
Migut.F01649 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.5e-06 57.0 105 31.4
Gohir.A08G193448 Gossypium hirsutum HOM05D000256 ORTHO05D000119 1.5e-06 57.0 124 29.8
Gorai.004G224600 Gossypium raimondii HOM05D000256 ORTHO05D000119 1.5e-06 57.0 117 29.9
Sc05g0002240 Simmondsia chinensis HOM05D000256 ORTHO05D000119 1.5e-06 57.0 100 31.0
Migut.F01934 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.9e-06 56.6 102 28.4
Lsat_1_v5_gn_5_38501 Lactuca sativa HOM05D010440 ORTHO05D000119 1.9e-06 56.6 120 24.2
Prupe.8G208400 Prunus persica HOM05D000256 ORTHO05D000119 1.9e-06 56.6 101 34.7
PGSC0003DMG400041390 Solanum tuberosum HOM05D000256 ORTHO05D000119 1.9e-06 56.6 93 32.3
MSTRG.3399 Avicennia marina HOM05D000256 ORTHO05D000119 2.5e-06 56.2 109 28.4
CAN.G1648.5 Capsicum annuum HOM05D000256 ORTHO05D000119 2.5e-06 56.2 132 27.3
CAN.G812.47 Capsicum annuum HOM05D000256 ORTHO05D000119 2.5e-06 56.2 104 35.6
ECA234G4325 Erigeron canadensis HOM05D020961 ORTHO05D025294 2.5e-06 56.2 158 27.2
Migut.C00643 Erythranthe guttata HOM05D000256 ORTHO05D000119 2.5e-06 56.2 122 31.1
Migut.F01928 Erythranthe guttata HOM05D000256 ORTHO05D000119 2.5e-06 56.2 92 32.6
Lalb_Chr23g0277321 Lupinus albus HOM05D000256 ORTHO05D000119 2.5e-06 56.2 92 34.8
Lalb_Chr23g0277461 Lupinus albus HOM05D000256 ORTHO05D000119 2.5e-06 56.2 69 40.6
unitig_899.g15049 Utricularia gibba HOM05D000256 ORTHO05D000119 2.5e-06 56.2 107 30.8
Carub.0006s0330 Capsella rubella HOM05D003012 ORTHO05D002833 3.3e-06 55.8 125 32.0
Migut.F01742 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.3e-06 55.8 119 31.9
Solyc09g091320.1 Solanum lycopersicum HOM05D000256 ORTHO05D000119 3.3e-06 55.8 145 26.9
Sopen05g019280 Solanum pennellii HOM05D000256 ORTHO05D000119 3.3e-06 55.8 112 30.4
SGA_v2.0_scaffold13G06369 Striga asiatica HOM05D000256 ORTHO05D000119 3.3e-06 55.8 70 32.9
Migut.F01937 Erythranthe guttata HOM05D000256 ORTHO05D000119 4.3e-06 55.5 107 29.0
Lalb_Chr23g0277431 Lupinus albus HOM05D000256 ORTHO05D000119 4.3e-06 55.5 66 40.9
THA.LOC104816435 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 4.3e-06 55.5 120 27.5
VMungo0720G0216 Vigna mungo HOM05D000256 ORTHO05D000119 4.3e-06 55.5 133 26.3
A08p36790 Brassica napus HOM05D000256 ORTHO05D000119 5.6e-06 55.1 123 33.3
Ciclev10024159m.g Citrus clementina HOM05D000256 ORTHO05D000119 5.6e-06 55.1 139 30.9
CsaV3_3G020600 Cucumis sativus L. HOM05D000256 ORTHO05D000119 5.6e-06 55.1 116 30.2
Gohir.A08G193464 Gossypium hirsutum HOM05D000256 ORTHO05D000119 5.6e-06 55.1 97 34.0
MD05G1181700 Malus domestica HOM05D000256 ORTHO05D000119 5.6e-06 55.1 121 29.8
SalBow1G1412 Salvia bowleyana HOM05D000256 ORTHO05D000119 5.6e-06 55.1 106 28.3
SalBow1G6082 Salvia bowleyana HOM05D000256 ORTHO05D000119 5.6e-06 55.1 106 28.3
SalBow4G1675 Salvia bowleyana HOM05D000256 ORTHO05D000119 5.6e-06 55.1 111 33.3
PGSC0003DMG400037544 Solanum tuberosum HOM05D000256 ORTHO05D000119 5.6e-06 55.1 96 33.3
THA.LOC104816681 Tarenaya hassleriana HOM05D003012 ORTHO05D002833 5.6e-06 55.1 87 34.5
FAN06G4947 Fragaria x ananassa HOM05D000256 ORTHO05D000119 7.3e-06 54.7 118 29.7
Medtr1g057310 Medicago truncatula HOM05D000256 ORTHO05D000119 7.3e-06 54.7 79 38.0
Prupe.8G208500 Prunus persica HOM05D000256 ORTHO05D000119 7.3e-06 54.7 98 30.6
RhsimUnG0181400 Rhododendron simsii HOM05D000256 ORTHO05D000119 7.3e-06 54.7 98 29.6
TAR362G0888 Trochodendron aralioides HOM05D000256 ORTHO05D000119 7.3e-06 54.7 68 38.2
CANSAT78G0605 Cannabis sativa HOM05D000256 ORTHO05D000119 9.5e-06 54.3 102 31.4
CAN.G194.26 Capsicum annuum HOM05D000256 ORTHO05D000119 9.5e-06 54.3 106 30.2
Migut.F01895 Erythranthe guttata HOM05D000256 ORTHO05D000119 9.5e-06 54.3 134 27.6
Gorai.004G224300 Gossypium raimondii HOM05D000256 ORTHO05D000119 9.5e-06 54.3 97 35.1
Lalb_Chr15g0076181 Lupinus albus HOM05D000256 ORTHO05D000119 9.5e-06 54.3 90 37.8
Sc05g0002230 Simmondsia chinensis HOM05D000256 ORTHO05D000119 9.5e-06 54.3 100 30.0


User provided reference genes

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