Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0183281 Helianthus annuus HOM05D006507 ORTHO05D007296 0.0e+00 1751.9 926 100.0
ECA238G2561 Erigeron canadensis HOM05D006507 ORTHO05D007296 3.9e-62 244.2 536 38.4
Lsat_1_v5_gn_2_25380 Lactuca sativa HOM05D006507 ORTHO05D007296 2.1e-39 168.7 927 27.0
Dinv32808 Davidia involucrata HOM05D006507 ORTHO05D007296 4.4e-29 134.4 133 50.4
Nitab4.5_0000270g0010 Nicotiana tabacum HOM05D006507 ORTHO05D007296 4.4e-29 134.4 166 42.8
Thecc.09G262500 Theobroma cacao HOM05D006507 ORTHO05D007296 1.7e-28 132.5 361 30.5
TWI79G0725 Tripterygium wilfordii HOM05D006507 ORTHO05D007296 2.2e-28 132.1 101 62.4
CSS0009997 Camellia sinensis var. sinensis HOM05D006507 ORTHO05D007296 2.4e-27 128.6 107 57.0
COL.COLO4_25271 Corchorus olitorius HOM05D006507 ORTHO05D007296 4.1e-27 127.9 263 37.6
Cc01_g11720 Coffea canephora HOM05D006507 ORTHO05D007296 7.0e-27 127.1 93 64.5
Thhalv10012478m.g Eutrema salsugineum HOM05D006507 ORTHO05D007296 9.2e-27 126.7 77 72.7
Manes.11G139900 Manihot esculenta HOM05D006507 ORTHO05D007296 1.2e-26 126.3 90 71.1
SalBow3G2105 Salvia bowleyana HOM05D006507 ORTHO05D007296 1.2e-26 126.3 132 48.5
Migut.N02633 Erythranthe guttata HOM05D006507 ORTHO05D007296 2.0e-26 125.6 74 77.0
QL01p036413 Quercus lobata HOM05D006507 ORTHO05D007296 2.7e-26 125.2 79 72.2
Ciclev10027733m.g Citrus clementina HOM05D006507 ORTHO05D007296 5.9e-26 124.0 74 77.0
Sp6g21800 Schrenkiella parvula HOM05D006507 ORTHO05D007296 5.9e-26 124.0 77 71.4
vmacro03159 Vaccinium macrocarpon HOM05D006507 ORTHO05D007296 7.8e-26 123.6 114 58.8
PGSC0003DMG400007499 Solanum tuberosum HOM05D006507 ORTHO05D007296 1.0e-25 123.2 286 33.6
Gohir.D07G120101 Gossypium hirsutum HOM05D006507 ORTHO05D007296 1.7e-25 122.5 259 38.2
Gorai.001G129300 Gossypium raimondii HOM05D006507 ORTHO05D007296 1.7e-25 122.5 259 38.2
Sopen06g031820 Solanum pennellii HOM05D006507 ORTHO05D007296 1.7e-25 122.5 126 50.0
CAN.G1001.2 Capsicum annuum HOM05D006507 ORTHO05D007296 2.3e-25 122.1 156 42.9
Solyc06g075420.1 Solanum lycopersicum HOM05D006507 ORTHO05D007296 2.3e-25 122.1 126 50.0
Gohir.A07G115600 Gossypium hirsutum HOM05D006507 ORTHO05D007296 3.9e-25 121.3 260 37.3
Atru.chr3.3727 Acer truncatum HOM05D006507 ORTHO05D007296 6.6e-25 120.6 448 30.6
MSTRG.12615 Avicennia marina HOM05D006507 ORTHO05D007296 8.6e-25 120.2 74 71.6
CANSAT54G2524 Cannabis sativa HOM05D006507 ORTHO05D007296 8.6e-25 120.2 89 66.3
Prupe.6G092200 Prunus persica HOM05D006507 ORTHO05D007296 8.6e-25 120.2 128 53.1
TAR633G2802 Trochodendron aralioides HOM05D006507 ORTHO05D007296 1.1e-24 119.8 816 26.7
AL8G36760 Arabidopsis lyrata HOM05D006507 ORTHO05D007296 1.5e-24 119.4 77 67.5
AT5G60150 Arabidopsis thaliana HOM05D006507 ORTHO05D007296 1.9e-24 119.0 76 65.8
DCAR_006032 Daucus carota HOM05D006507 ORTHO05D007296 1.9e-24 119.0 187 39.6
PSO339G6510 Papaver somniferum HOM05D006507 ORTHO05D007296 1.9e-24 119.0 106 55.7
PSO384G3963 Papaver somniferum HOM05D006507 ORTHO05D007296 1.9e-24 119.0 184 41.8
Potri.005G131500 Populus trichocarpa HOM05D006507 ORTHO05D007296 1.9e-24 119.0 112 54.5
Carub.0008s2088 Capsella rubella HOM05D006507 ORTHO05D007296 3.3e-24 118.2 77 67.5
Sabra05G0106900 Salix brachista HOM05D006507 ORTHO05D007296 3.3e-24 118.2 106 54.7
Aqoxy2G01879 Aquilegia oxysepala HOM05D006507 ORTHO05D007296 5.6e-24 117.5 84 67.9
C09p52640 Brassica napus HOM05D006507 ORTHO05D007296 1.2e-23 116.3 245 33.5
BraA10t43814Z Brassica rapa HOM05D006507 ORTHO05D007296 1.2e-23 116.3 245 33.5
MD03G1109500 Malus domestica HOM05D006507 ORTHO05D007296 1.2e-23 116.3 107 57.0
A10p17300 Brassica napus HOM05D006507 ORTHO05D007296 1.6e-23 115.9 245 33.5
SGA_v2.0_scaffold80G25739 Striga asiatica HOM05D006507 ORTHO05D007296 1.6e-23 115.9 67 73.1
GSVIVG01025113001 Vitis vinifera HOM05D038408 ORTHO05D007296 1.6e-23 115.9 127 50.4
Atru.chr3.3722 Acer truncatum HOM05D006507 ORTHO05D007296 3.6e-23 114.8 105 58.1
BolC9t58131H Brassica oleracea HOM05D006507 ORTHO05D007296 3.6e-23 114.8 439 27.8
Cpa.g.sc139.57 Carica papaya HOM05D006507 ORTHO05D007296 3.6e-23 114.8 82 64.6
VMungo1127G1622 Vigna mungo HOM05D006507 ORTHO05D007296 4.7e-23 114.4 203 37.9
Actinidia08403 Actinidia chinensis HOM05D006507 ORTHO05D007296 8.0e-23 113.6 69 78.3
Cfa011382 Carpinus fangiana HOM05D006507 ORTHO05D007296 1.4e-22 112.8 412 29.4
PGR102G3212 Punica granatum HOM05D006507 ORTHO05D007296 1.4e-22 112.8 173 39.9
Rhsim13G0091300 Rhododendron simsii HOM05D006507 ORTHO05D007296 1.4e-22 112.8 132 50.0
CARHR273800 Cardamine hirsuta HOM05D006507 ORTHO05D007296 1.8e-22 112.5 69 72.5
Lalb_Chr19g0137501 Lupinus albus HOM05D006507 ORTHO05D007296 1.8e-22 112.5 103 50.5
Glyma.11G150661 Glycine max HOM05D006507 ORTHO05D007296 3.1e-22 111.7 197 38.6
Sc21g0000130 Simmondsia chinensis HOM05D006507 ORTHO05D007296 3.1e-22 111.7 82 65.9
THA.LOC104810833 Tarenaya hassleriana HOM05D006507 ORTHO05D007296 4.0e-22 111.3 76 67.1
Duzib170G0831 Durio zibethinus HOM05D006507 ORTHO05D007296 5.2e-22 110.9 272 32.0
RcHm_v2.0_Chr5g0061361 Rosa chinensis HOM05D006507 ORTHO05D007296 2.6e-21 108.6 107 55.1
FAN11G1966 Fragaria x ananassa HOM05D006507 ORTHO05D007296 3.4e-21 108.2 285 32.6
AUR62025040 Chenopodium quinoa HOM05D006507 ORTHO05D007296 5.8e-21 107.5 68 72.1
Glyma.12G072900 Glycine max HOM05D006507 ORTHO05D007296 7.5e-21 107.1 71 69.0
Os12g0102700 Oryza sativa ssp. japonica HOM05D006507 ORTHO05D007296 9.8e-21 106.7 110 46.4
SEGI_16529 Sequoiadendron giganteum HOM05D006507 ORTHO05D007296 9.8e-21 106.7 130 41.5
arahy.Tifrunner.gnm1.ann1.NP2AMW Arachis hypogaea HOM05D006507 ORTHO05D007296 1.7e-20 105.9 95 56.8
TPR.G2995 Trifolium pratense HOM05D006507 ORTHO05D007296 1.7e-20 105.9 454 26.7
arahy.Tifrunner.gnm1.ann1.M2HQ4Q Arachis hypogaea HOM05D006507 ORTHO05D007296 2.2e-20 105.5 95 56.8
Lj3g0018374 Lotus japonicus HOM05D006507 ORTHO05D007296 2.2e-20 105.5 64 75.0
Ca_19235_v3 Cicer arietinum L. HOM05D006507 ORTHO05D007296 3.7e-20 104.8 63 76.2
Medtr4g061110 Medicago truncatula HOM05D006507 ORTHO05D007296 2.4e-19 102.1 253 32.0
AUR62006495 Chenopodium quinoa HOM05D006507 ORTHO05D007296 3.2e-19 101.7 278 30.6
FAN16G3496 Fragaria x ananassa HOM05D006507 ORTHO05D007296 3.2e-19 101.7 291 32.6
Psat7g223080 Pisum sativum HOM05D006507 ORTHO05D007296 7.0e-19 100.5 262 31.3
MELO3C025723.2 Cucumis melo HOM05D006507 ORTHO05D007296 3.5e-18 98.2 105 50.5
ClCG02G020740 Citrullus lanatus HOM05D006507 ORTHO05D007296 2.3e-17 95.5 410 28.0
HPP92_026984 Vanilla planifolia HOM05D006507 ORTHO05D007296 8.6e-17 93.6 65 63.1
EL10Ac9g22402 Beta vulgaris HOM05D006507 ORTHO05D007296 1.5e-16 92.8 61 67.2
HPP92_015411 Vanilla planifolia HOM05D006507 ORTHO05D007296 1.5e-16 92.8 65 63.1
Actinidia07103 Actinidia chinensis HOM05D006507 ORTHO05D007296 2.8e-15 88.6 59 71.2
CiPaw.13G105600 Carya illinoinensis HOM05D006507 ORTHO05D007296 3.6e-15 88.2 99 47.5
Haze_23947 Corylus avellana HOM05D006507 ORTHO05D007296 6.2e-15 87.4 97 49.5
Sed0026220 Sechium edule HOM05D006507 ORTHO05D007296 1.4e-14 86.3 66 65.2
Oeu022272.1 Olea europaea HOM05D006507 ORTHO05D007296 1.8e-14 85.9 52 75.0
CsaV3_6G021880 Cucumis sativus L. HOM05D006507 ORTHO05D007296 1.2e-13 83.2 80 52.5
Actinidia24071 Actinidia chinensis HOM05D006507 ORTHO05D007296 4.4e-13 81.3 82 57.3
Hma1.2p1_0840F.1_g226520 Hydrangea macrophylla HOM05D006507 ORTHO05D007296 4.9e-12 77.8 49 71.4
Pp3c16_7200 Physcomitrium patens HOM05D034648 ORTHO05D007296 1.4e-11 76.3 68 50.0
AagrBONN_evm.TU.Sc2ySwM_368.2680 Anthoceros agrestis HOM05D006507 ORTHO05D007296 2.4e-11 75.5 57 57.9
Mapoly0001s0188 Marchantia polymorpha HOM05D006507 ORTHO05D007296 5.4e-11 74.3 62 58.1
Sc24g0004230 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.0e-09 70.1 66 57.6
Nitab4.5_0001698g0050 Nicotiana tabacum HOM05D006507 ORTHO05D007296 1.3e-09 69.7 231 27.7
ATR1159G075 Amborella trichopoda HOM05D006507 ORTHO05D007296 2.3e-09 68.9 72 48.6
Sopen02g037960 Solanum pennellii HOM05D006507 ORTHO05D007296 1.5e-08 66.2 97 40.2
Peaxi162Scf00072g00226 Petunia axillaris HOM05D006507 ORTHO05D007296 7.3e-08 63.9 85 42.4
Hma1.2p1_0660F.1_g197490 Hydrangea macrophylla HOM05D006507 ORTHO05D007296 4.7e-07 61.2 66 50.0


User provided reference genes

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