Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0182151 Helianthus annuus HOM05D006169 ORTHO05D007698 2.8e-171 605.1 299 100.0
Lsat_1_v5_gn_7_73300 Lactuca sativa HOM05D006169 ORTHO05D007698 7.8e-121 437.6 266 82.7
ECA236G4200 Erigeron canadensis HOM05D006169 ORTHO05D007698 2.2e-115 419.5 257 79.4
Manes.08G114800 Manihot esculenta HOM05D006169 ORTHO05D007698 8.4e-99 364.4 279 69.2
Medtr1g083600 Medicago truncatula HOM05D006169 ORTHO05D007698 1.4e-98 363.6 263 71.5
Rhsim05G0136600 Rhododendron simsii HOM05D006169 ORTHO05D007698 1.4e-98 363.6 202 82.7
Phvul.007G198500 Phaseolus vulgaris HOM05D006169 ORTHO05D007698 4.2e-98 362.1 276 68.5
CANSAT54G3053 Cannabis sativa HOM05D006169 ORTHO05D007698 5.5e-98 361.7 270 69.3
Lj5g0023338 Lotus japonicus HOM05D006169 ORTHO05D007698 5.5e-98 361.7 256 71.5
Glyma.10G150300 Glycine max HOM05D006169 ORTHO05D007698 9.3e-98 360.9 206 82.0
SalBow3G0569 Salvia bowleyana HOM05D006169 ORTHO05D007698 1.6e-97 360.1 205 81.0
arahy.Tifrunner.gnm1.ann1.NVQ69B Arachis hypogaea HOM05D006169 ORTHO05D007698 7.9e-97 357.8 257 70.8
RcHm_v2.0_Chr3g0456451 Rosa chinensis HOM05D006169 ORTHO05D007698 1.0e-96 357.5 265 69.1
FvH4_6g06920 Fragaria vesca HOM05D006169 ORTHO05D007698 1.3e-96 357.1 276 67.0
Potri.013G012400 Populus trichocarpa HOM05D006169 ORTHO05D007698 1.8e-96 356.7 260 68.1
GSVIVG01031157001 Vitis vinifera HOM05D006169 ORTHO05D007698 2.3e-96 356.3 238 73.5
MD04G1197600 Malus domestica HOM05D006169 ORTHO05D007698 3.0e-96 355.9 249 70.3
QL03p019145 Quercus lobata HOM05D006169 ORTHO05D007698 3.0e-96 355.9 270 67.0
Ciclev10001820m.g Citrus clementina HOM05D006169 ORTHO05D007698 6.7e-96 354.8 282 66.0
Ca_10150_v3 Cicer arietinum L. HOM05D006169 ORTHO05D007698 8.7e-96 354.4 253 70.4
THA.LOC104802790 Tarenaya hassleriana HOM05D006169 ORTHO05D007698 1.9e-95 353.2 246 71.1
COL.COLO4_10563 Corchorus olitorius HOM05D006169 ORTHO05D007698 3.3e-95 352.4 202 82.2
Hma1.2p1_1441F.1_g283670 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 4.3e-95 352.1 205 80.5
CAN.G813.8 Capsicum annuum HOM05D006169 ORTHO05D007698 5.7e-95 351.7 207 77.8
Cc02_g34500 Coffea canephora HOM05D006169 ORTHO05D007698 5.7e-95 351.7 202 81.2
Nitab4.5_0001266g0050 Nicotiana tabacum HOM05D006169 ORTHO05D007698 7.4e-95 351.3 207 78.7
Duzib177G0247 Durio zibethinus HOM05D006169 ORTHO05D007698 9.7e-95 350.9 260 68.5
Aqoxy5G00801 Aquilegia oxysepala HOM05D006169 ORTHO05D007698 1.3e-94 350.5 208 78.8
CsaV3_2G006780 Cucumis sativus L. HOM05D006169 ORTHO05D007698 1.6e-94 350.1 255 69.4
Peaxi162Scf00484g00066 Petunia axillaris HOM05D006169 ORTHO05D007698 1.6e-94 350.1 258 68.2
Eucgr.L02153 Eucalyptus grandis HOM05D006169 ORTHO05D007698 2.2e-94 349.7 277 65.7
Gorai.007G302700 Gossypium raimondii HOM05D006169 ORTHO05D007698 2.2e-94 349.7 262 68.3
Gohir.A11G270300 Gossypium hirsutum HOM05D006169 ORTHO05D007698 6.3e-94 348.2 262 68.3
AUR62000726 Chenopodium quinoa HOM05D006169 ORTHO05D007698 1.4e-93 347.1 263 68.1
CARHR080070 Cardamine hirsuta HOM05D006169 ORTHO05D007698 2.4e-93 346.3 232 73.7
Migut.N02103 Erythranthe guttata HOM05D006169 ORTHO05D007698 2.4e-93 346.3 252 68.7
Thhalv10021364m.g Eutrema salsugineum HOM05D006169 ORTHO05D007698 3.1e-93 345.9 222 73.9
DCAR_029375 Daucus carota HOM05D006169 ORTHO05D007698 6.9e-93 344.7 264 67.8
Lj9C200T3 Lonicera japonica HOM05D006169 ORTHO05D007698 9.0e-93 344.4 294 63.6
MELO3C004212.2 Cucumis melo HOM05D006169 ORTHO05D007698 1.2e-92 344.0 253 69.2
Gohir.D11G280500 Gossypium hirsutum HOM05D006169 ORTHO05D007698 1.2e-92 344.0 262 67.6
Thecc.05G316900 Theobroma cacao HOM05D006169 ORTHO05D007698 1.2e-92 344.0 270 66.7
Actinidia02688 Actinidia chinensis HOM05D006169 ORTHO05D007698 1.5e-92 343.6 245 71.8
PSO210G0761 Papaver somniferum HOM05D006169 ORTHO05D007698 2.0e-92 343.2 270 65.9
TWI56G0200 Tripterygium wilfordii HOM05D006169 ORTHO05D007698 2.0e-92 343.2 275 64.4
AT3G05625 Arabidopsis thaliana HOM05D006169 ORTHO05D007698 2.6e-92 342.8 262 67.2
BcaB04g19252 Brassica carinata HOM05D006169 ORTHO05D007698 3.4e-92 342.4 224 73.2
Sopen10g013390 Solanum pennellii HOM05D006169 ORTHO05D007698 4.5e-92 342.0 203 77.3
AL3G16270 Arabidopsis lyrata HOM05D006169 ORTHO05D007698 5.9e-92 341.7 222 74.3
Solyc10g044710.2 Solanum lycopersicum HOM05D006169 ORTHO05D007698 1.0e-91 340.9 203 76.8
BolC3t16445H Brassica oleracea HOM05D006169 ORTHO05D007698 1.3e-91 340.5 224 72.8
Eucgr.H03261 Eucalyptus grandis HOM05D006169 ORTHO05D007698 1.7e-91 340.1 277 64.6
Ah.04g161300 Amaranthus hybridus HOM05D006169 ORTHO05D007698 5.0e-91 338.6 247 66.8
A03p34240 Brassica napus HOM05D006169 ORTHO05D007698 5.0e-91 338.6 224 73.7
BraA03t12598Z Brassica rapa HOM05D006169 ORTHO05D007698 5.0e-91 338.6 224 73.7
Sed0028110 Sechium edule HOM05D006169 ORTHO05D007698 5.0e-91 338.6 268 66.4
PGR031G2380 Punica granatum HOM05D006169 ORTHO05D007698 8.5e-91 337.8 272 65.4
SGA_v2.0_scaffold81G26108 Striga asiatica HOM05D006169 ORTHO05D007698 1.1e-90 337.4 271 64.6
Lalb_Chr06g0167751 Lupinus albus HOM05D006169 ORTHO05D007698 1.4e-90 337.0 246 69.9
Carub.0003s0495 Capsella rubella HOM05D006169 ORTHO05D007698 1.9e-90 336.7 263 67.7
BcaB04g19251 Brassica carinata HOM05D006169 ORTHO05D007698 3.2e-90 335.9 242 69.0
Atru.chr5.1841 Acer truncatum HOM05D006169 ORTHO05D007698 7.2e-90 334.7 254 65.7
Aa31LG5G16050 Aethionema arabicum HOM05D006169 ORTHO05D007698 7.2e-90 334.7 231 70.6
Eucgr.H04522 Eucalyptus grandis HOM05D006169 ORTHO05D007698 9.4e-90 334.3 263 65.0
Sp3g04510 Schrenkiella parvula HOM05D006169 ORTHO05D007698 4.6e-89 332.0 263 65.4
PSO832G1922 Papaver somniferum HOM05D006169 ORTHO05D007698 1.0e-88 330.9 266 65.4
Sc14g0006600 Simmondsia chinensis HOM05D006169 ORTHO05D007698 1.4e-88 330.5 264 65.2
TPR.G17714 Trifolium pratense HOM05D006169 ORTHO05D007698 2.3e-88 329.7 178 86.0
Sabra13G0011000 Salix brachista HOM05D006169 ORTHO05D007698 1.9e-87 326.6 299 58.5
FAN14G4015 Fragaria x ananassa HOM05D006169 ORTHO05D007698 4.1e-85 318.9 184 79.3
C03p41640 Brassica napus HOM05D006169 ORTHO05D007698 5.9e-84 315.1 255 65.5
HPP92_016950 Vanilla planifolia HOM05D006169 ORTHO05D007698 7.7e-84 314.7 208 69.7
HPP92_016954 Vanilla planifolia HOM05D006169 ORTHO05D007698 1.7e-83 313.5 242 63.2
ATR0693G261 Amborella trichopoda HOM05D006169 ORTHO05D007698 8.5e-83 311.2 204 72.5
CDE05G1145 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 1.4e-82 310.5 205 71.2
Haze_04109 Corylus avellana HOM05D006169 ORTHO05D007698 1.4e-82 310.5 251 65.7
BcaB04g19253 Brassica carinata HOM05D006169 ORTHO05D007698 3.2e-82 309.3 222 67.6
EL10Ac4g09881 Beta vulgaris HOM05D006169 ORTHO05D007698 8.8e-80 301.2 234 65.8
unitig_0.g2320 Utricularia gibba HOM05D006169 ORTHO05D007698 1.1e-79 300.8 209 69.9
Prupe.6G318000 Prunus persica HOM05D006169 ORTHO05D007698 1.3e-78 297.4 253 61.3
AUR62005238 Chenopodium quinoa HOM05D006169 ORTHO05D007698 2.8e-78 296.2 168 78.6
CiPaw.08G158800 Carya illinoinensis HOM05D006169 ORTHO05D007698 1.1e-77 294.3 271 57.9
ClCG02G015230 Citrullus lanatus HOM05D006169 ORTHO05D007698 2.4e-77 293.1 271 61.6
Hund07115 Selenicereus undatus HOM05D006169 ORTHO05D007698 2.4e-77 293.1 247 63.6
Cfa006660 Carpinus fangiana HOM05D006169 ORTHO05D007698 1.2e-76 290.8 263 60.1
FAN09G1827 Fragaria x ananassa HOM05D006169 ORTHO05D007698 1.5e-76 290.4 279 58.4
Hma1.2p1_1441F.1_g283680 Hydrangea macrophylla HOM05D006169 ORTHO05D007698 6.5e-75 285.0 166 81.3
SEGI_23594 Sequoiadendron giganteum HOM05D006169 ORTHO05D007698 9.4e-74 281.2 202 65.8
Cpa.g.sc48.120 Carica papaya HOM05D006169 ORTHO05D007698 1.6e-73 280.4 323 49.8
MBI18_g25080_MAGBIO Magnolia biondii HOM05D006169 ORTHO05D007698 2.3e-72 276.6 180 75.0
CDE11G0042 Ceratophyllum demersum HOM05D006169 ORTHO05D007698 4.4e-71 272.3 225 58.7
Nn3g21567 Nelumbo nucifera HOM05D006169 ORTHO05D007698 4.8e-70 268.9 275 56.0
Pp3c1_33190 Physcomitrium patens HOM05D006169 ORTHO05D007698 4.5e-68 262.3 195 64.6
Zm00001eb340780 Zea mays HOM05D006169 ORTHO05D007698 4.5e-68 262.3 162 75.9
Mapoly0065s0090 Marchantia polymorpha HOM05D006169 ORTHO05D007698 1.0e-67 261.2 198 63.6
ClCG00G004550 Citrullus lanatus HOM05D006169 ORTHO05D007698 1.1e-66 257.7 352 47.4
Dinv24403 Davidia involucrata HOM05D006169 ORTHO05D007698 2.3e-64 250.0 207 65.7
Psat6g151520 Pisum sativum HOM05D006169 ORTHO05D007698 8.8e-64 248.1 189 67.2
arahy.Tifrunner.gnm1.ann1.X8FEVW Arachis hypogaea HOM05D006169 ORTHO05D007698 2.0e-63 246.9 182 69.2
Actinidia19770 Actinidia chinensis HOM05D006169 ORTHO05D007698 3.3e-63 246.1 169 71.6
Oeu048884.1 Olea europaea HOM05D006169 ORTHO05D007698 2.2e-62 243.4 179 68.2
Nitab4.5_0000005g0540 Nicotiana tabacum HOM05D006169 ORTHO05D007698 1.2e-55 221.1 141 74.5
CBR_g8203 Chara braunii HOM05D006169 ORTHO05D007698 2.0e-55 220.3 206 52.4
VMungo0720G2022 Vigna mungo HOM05D006169 ORTHO05D007698 9.8e-55 218.0 268 50.7
Cre12.g508350 Chlamydomonas reinhardtii HOM05D006169 ORTHO05D007698 1.3e-54 217.6 181 56.4
AagrBONN_evm.TU.Sc2ySwM_344.2014 Anthoceros agrestis HOM05D006169 ORTHO05D007698 1.6e-52 210.7 152 65.8
Glyma.20G237950 Glycine max HOM05D006169 ORTHO05D007698 7.7e-52 208.4 117 82.9
FAN05G4461 Fragaria x ananassa HOM05D006169 ORTHO05D007698 4.2e-50 202.6 190 60.5
SMO358G0244 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 9.5e-50 201.4 181 52.5
MCO01G635 Micromonas commoda HOM05D006169 ORTHO05D007698 6.1e-41 172.2 181 49.2
TAR365G0132 Trochodendron aralioides HOM05D002548 ORTHO05D003031 3.4e-39 166.4 205 45.9
arahy.Tifrunner.gnm1.ann1.91HID7 Arachis hypogaea HOM05D006169 ORTHO05D007698 3.0e-35 153.3 81 85.2
arahy.Tifrunner.gnm1.ann1.Z5NCG3 Arachis hypogaea HOM05D006169 ORTHO05D007698 3.3e-34 149.8 81 84.0
PGSC0003DMG400043741 Solanum tuberosum HOM05D006169 ORTHO05D007698 1.8e-32 144.1 117 61.5
arahy.Tifrunner.gnm1.ann1.W0CMT4 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.5e-31 141.0 76 84.2
PRCOL_00000586 Prasinoderma coloniale HOM05D006169 ORTHO05D007698 9.2e-29 131.7 182 40.1
RcHm_v2.0_Chr1g0332671 Rosa chinensis HOM05D006169 ORTHO05D007698 2.1e-28 130.6 69 85.5
SMO117G0309 Selaginella moellendorffii HOM05D006169 ORTHO05D007698 5.6e-26 122.5 118 41.5
arahy.Tifrunner.gnm1.ann1.CWA5R2 Arachis hypogaea HOM05D006169 ORTHO05D007698 1.7e-22 110.9 58 86.2
CSS0040457 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 6.6e-19 99.0 51 90.2
Sabra13G0011100 Salix brachista HOM05D006169 ORTHO05D007698 1.8e-16 90.9 150 41.3
MSTRG.5122 Avicennia marina HOM05D006169 ORTHO05D007698 2.0e-15 87.4 97 51.5
arahy.Tifrunner.gnm1.ann1.4I5A07 Arachis hypogaea HOM05D000158 ORTHO05D003614 9.9e-15 85.1 45 82.2
arahy.Tifrunner.gnm1.ann1.C5NY6B Arachis hypogaea HOM05D006169 ORTHO05D007698 2.2e-14 84.0 64 62.5
CSS0014495 Camellia sinensis var. sinensis HOM05D006169 ORTHO05D007698 2.9e-14 83.6 123 48.0
arahy.Tifrunner.gnm1.ann1.GNZ56J Arachis hypogaea HOM05D006169 ORTHO05D007698 4.6e-12 76.3 44 75.0
Os01g0343500 Oryza sativa ssp. japonica HOM05D006169 ORTHO05D007698 4.8e-09 66.2 92 44.6


User provided reference genes

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