Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 1.7e-103 379.4 199 100.0
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 2.0e-88 329.3 198 86.9
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 3.4e-80 302.0 202 78.7
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 5.5e-78 294.7 202 77.2
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 1.4e-73 280.0 207 72.9
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 1.4e-73 280.0 211 70.6
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 2.0e-72 276.2 205 72.7
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 2.6e-72 275.8 212 70.8
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 7.6e-72 274.2 205 71.2
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 7.6e-72 274.2 207 70.5
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.0e-71 273.9 205 69.8
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.3e-71 273.5 205 69.8
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 1.7e-71 273.1 216 68.1
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 2.2e-71 272.7 205 69.8
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 1.1e-70 270.4 206 70.4
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 2.5e-70 269.2 204 72.5
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 7.2e-70 267.7 202 71.8
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 6.1e-69 264.6 206 69.9
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 2.3e-68 262.7 204 67.6
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 2.3e-68 262.7 219 68.0
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 3.0e-68 262.3 204 69.1
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 3.9e-68 261.9 204 69.1
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 5.1e-68 261.5 189 72.5
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 1.1e-67 260.4 205 69.3
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 1.1e-67 260.4 200 70.5
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 1.9e-67 259.6 228 65.8
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 3.3e-67 258.8 200 70.0
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 3.3e-67 258.8 212 65.6
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 4.3e-67 258.5 210 67.1
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 4.3e-67 258.5 206 67.0
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 5.7e-67 258.1 205 68.3
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 5.7e-67 258.1 204 69.6
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 9.7e-67 257.3 231 64.5
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 9.7e-67 257.3 213 66.7
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 1.3e-66 256.9 200 69.0
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 2.8e-66 255.8 207 68.1
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 3.7e-66 255.4 219 63.9
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 6.3e-66 254.6 200 68.0
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 8.2e-66 254.2 184 72.8
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 1.4e-65 253.4 208 65.9
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 1.8e-65 253.1 210 65.7
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 3.1e-65 252.3 214 65.0
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 1.2e-64 250.4 200 66.5
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 2.0e-64 249.6 200 69.0
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 3.4e-64 248.8 224 62.9
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 5.9e-64 248.1 207 65.7
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 5.9e-64 248.1 200 69.0
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 1.0e-63 247.3 207 66.7
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 2.2e-63 246.1 208 63.5
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 2.9e-63 245.7 213 61.0
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 2.9e-63 245.7 182 70.9
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 6.5e-63 244.6 180 71.7
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 6.5e-63 244.6 204 64.7
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 1.1e-62 243.8 209 64.6
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.1e-62 243.8 214 61.7
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 1.4e-62 243.4 182 70.3
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 4.2e-62 241.9 216 60.6
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 9.4e-62 240.7 214 61.2
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 1.2e-61 240.4 214 60.7
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 1.2e-61 240.4 219 59.8
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 1.2e-61 240.4 214 59.8
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 1.2e-61 240.4 200 67.0
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 1.6e-61 240.0 214 60.7
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 1.6e-61 240.0 213 61.0
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 2.7e-61 239.2 220 59.1
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 2.7e-61 239.2 220 58.6
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 2.7e-61 239.2 214 60.7
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 2.7e-61 239.2 216 58.8
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 1.8e-60 236.5 168 75.6
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 2.3e-60 236.1 204 64.7
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 2.3e-60 236.1 198 65.7
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 5.1e-60 235.0 198 65.2
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 2.0e-59 233.0 187 67.9
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 2.0e-59 233.0 189 64.0
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 2.0e-59 233.0 156 76.3
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 4.4e-59 231.9 146 81.5
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 5.7e-59 231.5 156 75.0
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 5.7e-59 231.5 153 77.1
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 7.4e-59 231.1 210 61.9
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 1.3e-58 230.3 207 62.3
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 1.3e-58 230.3 205 63.9
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 4.8e-58 228.4 191 62.8
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 1.4e-57 226.9 144 79.9
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 1.4e-57 226.9 188 64.9
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.0e-55 220.7 152 73.0
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 2.2e-55 219.5 218 56.9
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 8.5e-55 217.6 154 73.4
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 1.9e-54 216.5 155 73.5
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 4.2e-54 215.3 144 77.1
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 2.7e-53 212.6 205 61.0
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 4.7e-53 211.8 144 72.2
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 7.9e-53 211.1 144 76.4
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 5.2e-52 208.4 143 72.0
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 7.0e-49 198.0 206 55.8
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 2.6e-48 196.1 166 63.9
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 2.6e-48 196.1 155 63.9
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.6e-45 186.8 160 63.1
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 2.7e-45 186.0 205 53.7
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 1.4e-44 183.7 119 79.8
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 1.1e-41 174.1 184 54.3
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 4.1e-41 172.2 193 55.4
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 5.7e-35 151.8 170 48.8
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 2.2e-34 149.8 143 60.8
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 1.7e-31 140.2 90 77.8
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 1.7e-31 140.2 124 65.3
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 5.0e-31 138.7 180 47.2
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 3.0e-28 129.4 81 80.2
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 8.8e-28 127.9 79 81.0
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 8.3e-26 121.3 113 58.4
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 1.6e-24 117.1 179 41.9
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 8.0e-21 104.8 72 75.0
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 1.5e-19 100.5 170 40.6
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 2.9e-18 96.3 97 55.7
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 3.7e-18 95.9 72 66.7
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 1.6e-16 90.5 238 31.5
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 2.3e-15 86.7 64 68.8
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 5.0e-15 85.5 99 52.5
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 7.3e-14 81.6 56 71.4
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 3.2e-09 66.2 140 33.6
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 1.2e-08 64.3 75 53.3
MCO03G486 Micromonas commoda HOM05D006789 ORTHO05D008460 6.0e-08 62.0 98 39.8
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 1.3e-07 60.8 59 50.8
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 2.3e-07 60.1 54 61.1


User provided reference genes

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