Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0179721 Helianthus annuus HOM05D007133 ORTHO05D008954 1.7e-39 165.6 86 100.0
Lsat_1_v5_gn_1_104961 Lactuca sativa HOM05D007133 ORTHO05D008954 1.6e-34 149.1 85 87.1
ECA248G0684 Erigeron canadensis HOM05D007133 ORTHO05D008954 8.8e-33 143.3 86 86.0
vmacro21138 Vaccinium macrocarpon HOM05D007133 ORTHO05D008954 1.4e-30 136.0 89 80.9
Dinv03122 Davidia involucrata HOM05D007133 ORTHO05D008954 3.1e-30 134.8 81 82.7
Dinv09308 Davidia involucrata HOM05D007133 ORTHO05D008954 3.1e-30 134.8 81 82.7
Actinidia21538 Actinidia chinensis HOM05D007133 ORTHO05D008954 5.3e-30 134.0 85 78.8
Potri.001G262000 Populus trichocarpa HOM05D007133 ORTHO05D008954 1.6e-29 132.5 83 81.9
Cc02_g28790 Coffea canephora HOM05D007133 ORTHO05D008954 1.0e-28 129.8 83 78.3
CSS0001581 Camellia sinensis var. sinensis HOM05D007133 ORTHO05D008954 6.5e-28 127.1 87 75.9
PGR031G3629 Punica granatum HOM05D007133 ORTHO05D008954 8.5e-28 126.7 81 76.5
Oeu027371.1 Olea europaea HOM05D007133 ORTHO05D008954 1.5e-27 125.9 83 74.7
Migut.N01798 Erythranthe guttata HOM05D007133 ORTHO05D008954 2.5e-27 125.2 83 74.7
Eucgr.G03322 Eucalyptus grandis HOM05D007133 ORTHO05D008954 2.5e-27 125.2 81 77.8
TAR633G1269 Trochodendron aralioides HOM05D007133 ORTHO05D008954 2.5e-27 125.2 87 75.9
CiPaw.14G003100 Carya illinoinensis HOM05D007133 ORTHO05D008954 3.2e-27 124.8 77 80.5
Manes.10G136200 Manihot esculenta HOM05D007133 ORTHO05D008954 4.2e-27 124.4 84 75.0
FvH4_7g01820 Fragaria vesca HOM05D007133 ORTHO05D008954 7.2e-27 123.6 81 76.5
FAN01G1667 Fragaria x ananassa HOM05D007133 ORTHO05D008954 7.2e-27 123.6 81 76.5
RcHm_v2.0_Chr1g0318451 Rosa chinensis HOM05D007133 ORTHO05D008954 1.2e-26 122.9 81 76.5
Peaxi162Scf01270g00118 Petunia axillaris HOM05D007133 ORTHO05D008954 2.1e-26 122.1 89 71.9
MD02G1300200 Malus domestica HOM05D007133 ORTHO05D008954 2.7e-26 121.7 77 77.9
COL.COLO4_12337 Corchorus olitorius HOM05D007133 ORTHO05D008954 3.6e-26 121.3 85 70.6
Duzib268G0834 Durio zibethinus HOM05D007133 ORTHO05D008954 3.6e-26 121.3 83 69.9
MD07G1024700 Malus domestica HOM05D007133 ORTHO05D008954 3.6e-26 121.3 77 76.6
Prupe.2G024400 Prunus persica HOM05D007133 ORTHO05D008954 3.6e-26 121.3 77 76.6
Nn7g36332 Nelumbo nucifera HOM05D007133 ORTHO05D008954 4.7e-26 120.9 89 70.8
Sed0015487 Sechium edule HOM05D007133 ORTHO05D008954 4.7e-26 120.9 81 72.8
Gohir.A12G100700 Gossypium hirsutum HOM05D007133 ORTHO05D008954 6.1e-26 120.6 83 69.9
Gohir.D12G103551 Gossypium hirsutum HOM05D007133 ORTHO05D008954 6.1e-26 120.6 83 69.9
Gorai.008G112700 Gossypium raimondii HOM05D007133 ORTHO05D008954 6.1e-26 120.6 83 69.9
GSVIVG01032212001 Vitis vinifera HOM05D007133 ORTHO05D008954 6.1e-26 120.6 81 76.5
arahy.Tifrunner.gnm1.ann1.PZX0PK Arachis hypogaea HOM05D007133 ORTHO05D008954 8.0e-26 120.2 85 70.6
CsaV3_7G030730 Cucumis sativus L. HOM05D007133 ORTHO05D008954 8.0e-26 120.2 77 75.3
Sabra09G0041600 Salix brachista HOM05D007133 ORTHO05D008954 8.0e-26 120.2 84 72.6
SGA_v2.0_scaffold5G02955 Striga asiatica HOM05D007133 ORTHO05D008954 8.0e-26 120.2 79 74.7
arahy.Tifrunner.gnm1.ann1.1B9UE2 Arachis hypogaea HOM05D007133 ORTHO05D008954 1.0e-25 119.8 83 72.3
Phvul.001G156100 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 1.4e-25 119.4 87 69.0
Ciclev10033166m.g Citrus clementina HOM05D007133 ORTHO05D008954 1.8e-25 119.0 83 72.3
THA.LOC104817576 Tarenaya hassleriana HOM05D007133 ORTHO05D008954 1.8e-25 119.0 85 68.2
TPR.G30180 Trifolium pratense HOM05D007133 ORTHO05D008954 2.3e-25 118.6 83 71.1
Hund26515 Selenicereus undatus HOM05D007133 ORTHO05D008954 3.0e-25 118.2 83 71.1
Lj3g0009786 Lotus japonicus HOM05D007133 ORTHO05D008954 4.0e-25 117.9 83 72.3
Phvul.011G010800 Phaseolus vulgaris HOM05D007133 ORTHO05D008954 4.0e-25 117.9 87 67.8
Potri.009G056800 Populus trichocarpa HOM05D007133 ORTHO05D008954 4.0e-25 117.9 84 72.6
Medtr0512s0010 Medicago truncatula HOM05D007133 ORTHO05D008954 5.2e-25 117.5 83 72.3
Thecc.01G406600 Theobroma cacao HOM05D007133 ORTHO05D008954 6.7e-25 117.1 85 67.1
Glyma.09G226900 Glycine max HOM05D007133 ORTHO05D008954 8.8e-25 116.7 86 67.4
Glyma.12G009900 Glycine max HOM05D007133 ORTHO05D008954 8.8e-25 116.7 86 67.4
Lalb_Chr04g0263851 Lupinus albus HOM05D007133 ORTHO05D008954 1.2e-24 116.3 83 69.9
Atru.chr11.2512 Acer truncatum HOM05D007133 ORTHO05D008954 1.5e-24 115.9 85 69.4
TWI53G1532 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 2.6e-24 115.2 83 68.7
CANSAT80G0888 Cannabis sativa HOM05D007133 ORTHO05D008954 3.3e-24 114.8 77 77.9
Nitab4.5_0008942g0020 Nicotiana tabacum HOM05D007133 ORTHO05D008954 3.3e-24 114.8 89 71.9
TWI09G1631 Tripterygium wilfordii HOM05D007133 ORTHO05D008954 4.4e-24 114.4 83 68.7
Sc10g0000360 Simmondsia chinensis HOM05D007133 ORTHO05D008954 5.7e-24 114.0 77 71.4
CDE08G1151 Ceratophyllum demersum HOM05D007133 ORTHO05D008954 1.3e-23 112.8 81 72.8
MELO3C023583.2 Cucumis melo HOM05D007133 ORTHO05D008954 1.3e-23 112.8 91 64.8
Lalb_Chr25g0282521 Lupinus albus HOM05D007133 ORTHO05D008954 1.3e-23 112.8 81 70.4
Carub.0005s1836 Capsella rubella HOM05D007133 ORTHO05D008954 2.2e-23 112.1 81 69.1
PSO063G0957 Papaver somniferum HOM05D007133 ORTHO05D008954 2.2e-23 112.1 83 72.3
AT3G52040 Arabidopsis thaliana HOM05D007133 ORTHO05D008954 3.7e-23 111.3 81 67.9
Aqoxy1G00141 Aquilegia oxysepala HOM05D007133 ORTHO05D008954 4.8e-23 110.9 77 74.0
PSO170G5856 Papaver somniferum HOM05D007133 ORTHO05D008954 4.8e-23 110.9 83 71.1
AUR62023097 Chenopodium quinoa HOM05D007133 ORTHO05D008954 8.3e-23 110.2 81 66.7
Zm00001eb332910 Zea mays HOM05D007133 ORTHO05D008954 8.3e-23 110.2 84 64.3
EL10Ac2g04374 Beta vulgaris HOM05D007133 ORTHO05D008954 1.1e-22 109.8 83 65.1
FAN10G0509 Fragaria x ananassa HOM05D007133 ORTHO05D008954 1.1e-22 109.8 73 75.3
AL5G32580 Arabidopsis lyrata HOM05D007133 ORTHO05D008954 1.8e-22 109.0 81 66.7
Solyc01g087880.3 Solanum lycopersicum HOM05D007133 ORTHO05D008954 1.8e-22 109.0 85 68.2
Sopen01g034810 Solanum pennellii HOM05D007133 ORTHO05D008954 1.8e-22 109.0 85 68.2
Ah.10g038590 Amaranthus hybridus HOM05D007133 ORTHO05D008954 3.1e-22 108.2 81 64.2
Ca_26645_v3 Cicer arietinum L. HOM05D007133 ORTHO05D008954 3.1e-22 108.2 83 66.3
BcaB01g00452 Brassica carinata HOM05D007133 ORTHO05D008954 4.1e-22 107.8 80 66.2
BcaC06g33021 Brassica carinata HOM05D007133 ORTHO05D008954 4.1e-22 107.8 81 66.7
C08p27290 Brassica napus HOM05D007133 ORTHO05D008954 4.1e-22 107.8 80 66.2
BolC8t50346H Brassica oleracea HOM05D007133 ORTHO05D008954 4.1e-22 107.8 80 66.2
Thhalv10010861m.g Eutrema salsugineum HOM05D007133 ORTHO05D008954 4.1e-22 107.8 81 67.9
PGSC0003DMG400006836 Solanum tuberosum HOM05D007133 ORTHO05D008954 7.0e-22 107.1 85 67.1
A09p45100 Brassica napus HOM05D007133 ORTHO05D008954 1.6e-21 105.9 80 65.0
BraA09t39971Z Brassica rapa HOM05D007133 ORTHO05D008954 1.6e-21 105.9 80 65.0
ClCG09G004410 Citrullus lanatus HOM05D007133 ORTHO05D008954 2.0e-21 105.5 112 53.6
Aa31LG10G7080 Aethionema arabicum HOM05D007133 ORTHO05D008954 3.5e-21 104.8 84 65.5
Eucgr.G03325 Eucalyptus grandis HOM05D007133 ORTHO05D008954 4.5e-21 104.4 81 65.4
C07p46740 Brassica napus HOM05D007133 ORTHO05D008954 1.0e-20 103.2 81 63.0
BolC7t45192H Brassica oleracea HOM05D007133 ORTHO05D008954 1.0e-20 103.2 81 63.0
BcaC06g33378 Brassica carinata HOM05D007133 ORTHO05D008954 1.3e-20 102.8 81 63.0
Haze_03143 Corylus avellana HOM05D007133 ORTHO05D008954 6.5e-20 100.5 155 43.2
Haze_03146 Corylus avellana HOM05D007133 ORTHO05D008954 6.5e-20 100.5 155 43.2
Nitab4.5_0001244g0090 Nicotiana tabacum HOM05D007133 ORTHO05D008954 6.5e-20 100.5 115 55.7
A03p48620 Brassica napus HOM05D007133 ORTHO05D008954 1.5e-19 99.4 81 60.5
CARHR161670 Cardamine hirsuta HOM05D007133 ORTHO05D008954 1.5e-19 99.4 81 64.2
BraA03t13967Z Brassica rapa HOM05D007133 ORTHO05D008954 2.5e-19 98.6 81 60.5
Cc00_g19310 Coffea canephora HOM05D004771 ORTHO05D005565 2.5e-19 98.6 83 66.3
SalBow6G3002 Salvia bowleyana HOM05D007133 ORTHO05D008954 6.1e-18 94.0 124 47.6
unitig_8.g3622 Utricularia gibba HOM05D007133 ORTHO05D008954 6.1e-18 94.0 71 66.2
Dinv09304 Davidia involucrata HOM05D007133 ORTHO05D008954 4.0e-17 91.3 52 86.5
Medtr4g101060 Medicago truncatula HOM05D007133 ORTHO05D008954 5.4e-14 80.9 59 66.1
MBI19_g09240_MAGBIO Magnolia biondii HOM05D007133 ORTHO05D008954 9.1e-14 80.1 185 33.0
Rhsim01G0126300 Rhododendron simsii HOM05D007133 ORTHO05D008954 2.7e-13 78.6 48 81.2
AagrBONN_evm.TU.Sc2ySwM_344.2738 Anthoceros agrestis HOM05D007133 ORTHO05D008954 1.5e-11 72.8 84 50.0
Hma1.2p1_0685F.1_g203210 Hydrangea macrophylla HOM05D007133 ORTHO05D008954 1.9e-11 72.4 49 73.5
Pp3c9_17680 Physcomitrium patens HOM05D007133 ORTHO05D008954 1.9e-11 72.4 77 54.5
Psat7g197280 Pisum sativum HOM05D007133 ORTHO05D008954 1.9e-11 72.4 58 63.8
QL04p010011 Quercus lobata HOM05D007133 ORTHO05D008954 1.9e-11 72.4 48 77.1
HPP92_001020 Vanilla planifolia HOM05D007133 ORTHO05D008954 1.9e-11 72.4 58 58.6
Mapoly0049s0103 Marchantia polymorpha HOM05D007133 ORTHO05D008954 5.5e-11 70.9 77 51.9
Duzib133G0944 Durio zibethinus HOM05D007133 ORTHO05D008954 4.7e-10 67.8 48 66.7
Os01g0271700 Oryza sativa ssp. japonica HOM05D007133 ORTHO05D008954 1.2e-08 63.2 48 62.5
Rhsim01G0126100 Rhododendron simsii HOM05D007133 ORTHO05D008954 2.6e-08 62.0 42 78.6
Cc00_g26940 Coffea canephora HOM05D007133 ORTHO05D008954 2.2e-07 58.9 54 63.0


User provided reference genes

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