Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0178811 Helianthus annuus HOM05D005444 ORTHO05D006773 2.0e-192 675.6 341 100.0
Lsat_1_v5_gn_8_73500 Lactuca sativa HOM05D005444 ORTHO05D006773 5.8e-128 461.5 296 77.0
HanXRQChr05g0135061 Helianthus annuus HOM05D005444 ORTHO05D006773 8.6e-124 447.6 301 76.4
ECA236G0569 Erigeron canadensis HOM05D005444 ORTHO05D006773 1.2e-122 443.7 302 74.5
Dinv04178 Davidia involucrata HOM05D005444 ORTHO05D006773 1.4e-110 403.7 299 69.6
Actinidia34411 Actinidia chinensis HOM05D005444 ORTHO05D006773 2.6e-104 382.9 298 67.1
CSS0026048 Camellia sinensis var. sinensis HOM05D005444 ORTHO05D006773 3.2e-102 375.9 298 66.1
Rhsim01G0229400 Rhododendron simsii HOM05D005444 ORTHO05D006773 3.5e-101 372.5 288 64.9
GSVIVG01024939001 Vitis vinifera HOM05D005444 ORTHO05D006773 3.3e-99 365.9 294 65.0
Cfa011517 Carpinus fangiana HOM05D005444 ORTHO05D006773 1.3e-98 364.0 280 66.8
CAN.G394.63 Capsicum annuum HOM05D005444 ORTHO05D006773 1.1e-97 360.9 285 64.6
Haze_24114 Corylus avellana HOM05D005444 ORTHO05D006773 4.0e-97 359.0 280 65.4
Nitab4.5_0000463g0210 Nicotiana tabacum HOM05D005444 ORTHO05D006773 1.5e-96 357.1 282 64.9
Manes.02G131500 Manihot esculenta HOM05D005444 ORTHO05D006773 2.0e-96 356.7 285 62.1
MD11G1099800 Malus domestica HOM05D005444 ORTHO05D006773 2.6e-96 356.3 300 62.7
Migut.D02083 Erythranthe guttata HOM05D005444 ORTHO05D006773 3.4e-96 355.9 279 64.9
CANSAT54G1668 Cannabis sativa HOM05D005444 ORTHO05D006773 5.8e-96 355.1 311 61.4
QL01p031522 Quercus lobata HOM05D005444 ORTHO05D006773 1.0e-95 354.4 291 62.5
Peaxi162Scf00774g00121 Petunia axillaris HOM05D005444 ORTHO05D006773 1.7e-95 353.6 279 66.7
Potri.001G241400 Populus trichocarpa HOM05D005444 ORTHO05D006773 1.7e-95 353.6 236 70.3
MD03G1090200 Malus domestica HOM05D005444 ORTHO05D006773 1.2e-93 347.4 233 71.2
Sc21g0005860 Simmondsia chinensis HOM05D005444 ORTHO05D006773 2.1e-93 346.7 248 66.5
vmacro14541 Vaccinium macrocarpon HOM05D005444 ORTHO05D006773 3.5e-93 345.9 279 64.2
AUR62009560 Chenopodium quinoa HOM05D005444 ORTHO05D006773 6.0e-93 345.1 240 67.9
Ciclev10028946m.g Citrus clementina HOM05D005444 ORTHO05D006773 7.9e-93 344.7 296 60.1
Cc01_g13010 Coffea canephora HOM05D005444 ORTHO05D006773 1.0e-92 344.4 283 61.8
Atru.chr3.3946 Acer truncatum HOM05D005444 ORTHO05D006773 3.0e-92 342.8 304 57.9
Solyc06g076250.4 Solanum lycopersicum HOM05D005444 ORTHO05D006773 3.9e-92 342.4 282 62.8
Sopen06g032680 Solanum pennellii HOM05D005444 ORTHO05D006773 3.9e-92 342.4 282 62.8
Potri.009G032300 Populus trichocarpa HOM05D005444 ORTHO05D006773 8.7e-92 341.3 284 60.2
Nitab4.5_0001326g0170 Nicotiana tabacum HOM05D005444 ORTHO05D006773 1.1e-91 340.9 307 59.0
Sed0025445 Sechium edule HOM05D005444 ORTHO05D006773 2.5e-91 339.7 291 58.8
PGSC0003DMG401030323 Solanum tuberosum HOM05D005444 ORTHO05D006773 2.5e-91 339.7 282 61.3
FvH4_3g36480 Fragaria vesca HOM05D005444 ORTHO05D006773 4.3e-91 339.0 236 67.8
Lj1A150T42 Lonicera japonica HOM05D005444 ORTHO05D006773 5.7e-91 338.6 261 67.4
Eucgr.B02353 Eucalyptus grandis HOM05D005444 ORTHO05D006773 1.3e-90 337.4 245 66.1
Gohir.D07G103400 Gossypium hirsutum HOM05D005444 ORTHO05D006773 6.3e-90 335.1 284 57.7
Sabra09G0022900 Salix brachista HOM05D005444 ORTHO05D006773 1.1e-89 334.3 274 60.2
Gorai.001G111300 Gossypium raimondii HOM05D005444 ORTHO05D006773 1.8e-89 333.6 284 57.7
FAN21G3395 Fragaria x ananassa HOM05D005444 ORTHO05D006773 3.1e-89 332.8 281 58.7
Glyma.12G062600 Glycine max HOM05D005444 ORTHO05D006773 2.0e-88 330.1 287 59.6
THA.LOC104810774 Tarenaya hassleriana HOM05D005444 ORTHO05D006773 3.4e-88 329.3 237 65.4
SalBow3G1488 Salvia bowleyana HOM05D005444 ORTHO05D006773 7.6e-88 328.2 311 55.9
Gohir.A07G098900 Gossypium hirsutum HOM05D005444 ORTHO05D006773 1.0e-87 327.8 284 57.0
BraA10t43744Z Brassica rapa HOM05D005444 ORTHO05D006773 1.7e-87 327.0 240 65.4
COL.COLO4_18527 Corchorus olitorius HOM05D005444 ORTHO05D006773 1.7e-87 327.0 237 64.1
RcHm_v2.0_Chr5g0065341 Rosa chinensis HOM05D005444 ORTHO05D006773 1.7e-87 327.0 281 59.1
Actinidia23933 Actinidia chinensis HOM05D000001 ORTHO05D000003 3.8e-87 325.9 315 58.1
Sp6g21080 Schrenkiella parvula HOM05D005444 ORTHO05D006773 3.8e-87 325.9 289 58.1
ATR0559G091 Amborella trichopoda HOM05D005444 ORTHO05D006773 5.0e-87 325.5 293 58.7
BcaC04g19778 Brassica carinata HOM05D005444 ORTHO05D006773 5.0e-87 325.5 240 65.0
A10p16600 Brassica napus HOM05D005444 ORTHO05D006773 5.0e-87 325.5 240 65.0
C09p51810 Brassica napus HOM05D005444 ORTHO05D006773 5.0e-87 325.5 240 65.0
BolC9t58042H Brassica oleracea HOM05D005444 ORTHO05D006773 5.0e-87 325.5 240 65.0
Glyma.13G336800 Glycine max HOM05D005444 ORTHO05D006773 1.4e-86 323.9 279 56.6
Phvul.011G063700 Phaseolus vulgaris HOM05D005444 ORTHO05D006773 1.4e-86 323.9 287 58.5
BcaB08g36261 Brassica carinata HOM05D005444 ORTHO05D006773 1.9e-86 323.6 240 65.4
Carub.0008s2007 Capsella rubella HOM05D005444 ORTHO05D006773 1.9e-86 323.6 286 57.7
Lj3g0017515 Lotus japonicus HOM05D005444 ORTHO05D006773 1.9e-86 323.6 291 57.0
Hund04946 Selenicereus undatus HOM05D005444 ORTHO05D006773 1.9e-86 323.6 334 53.6
AL8G35870 Arabidopsis lyrata HOM05D005444 ORTHO05D006773 2.5e-86 323.2 290 57.6
Aa31sc23G420 Aethionema arabicum HOM05D005444 ORTHO05D006773 4.2e-86 322.4 289 57.1
CsaV3_1G034350 Cucumis sativus L. HOM05D005444 ORTHO05D006773 4.2e-86 322.4 319 53.6
AT5G59400 Arabidopsis thaliana HOM05D005444 ORTHO05D006773 5.5e-86 322.0 290 56.6
PSO339G5422 Papaver somniferum HOM05D005444 ORTHO05D006773 5.5e-86 322.0 276 58.0
Sabra16G0145900 Salix brachista HOM05D005444 ORTHO05D006773 7.2e-86 321.6 269 61.7
PSO063G3487 Papaver somniferum HOM05D005444 ORTHO05D006773 1.2e-85 320.9 295 55.9
arahy.Tifrunner.gnm1.ann1.XH3YCC Arachis hypogaea HOM05D005444 ORTHO05D006773 1.6e-85 320.5 291 54.6
FAN16G3284 Fragaria x ananassa HOM05D005444 ORTHO05D006773 1.6e-85 320.5 267 59.2
TPR.G34263 Trifolium pratense HOM05D005444 ORTHO05D006773 2.1e-85 320.1 236 63.1
arahy.Tifrunner.gnm1.ann1.3F7RX4 Arachis hypogaea HOM05D005444 ORTHO05D006773 2.3e-84 316.6 291 54.3
Glyma.15G037500 Glycine max HOM05D005444 ORTHO05D006773 2.3e-84 316.6 240 62.1
TWI79G0937 Tripterygium wilfordii HOM05D005444 ORTHO05D006773 2.3e-84 316.6 281 57.7
TAR633G2200 Trochodendron aralioides HOM05D005444 ORTHO05D006773 8.7e-84 314.7 268 63.1
Ca_01319_v3 Cicer arietinum L. HOM05D005444 ORTHO05D006773 1.9e-83 313.5 287 55.4
VMungo1127G0766 Vigna mungo HOM05D005444 ORTHO05D006773 3.3e-83 312.8 287 57.1
Phvul.L006243 Phaseolus vulgaris HOM05D005444 ORTHO05D006773 7.4e-83 311.6 236 61.0
Medtr2g097230 Medicago truncatula HOM05D005444 ORTHO05D006773 3.7e-82 309.3 296 53.0
FAN11G0832 Fragaria x ananassa HOM05D005444 ORTHO05D006773 4.8e-82 308.9 283 56.2
ClCG03G001420 Citrullus lanatus HOM05D005444 ORTHO05D006773 1.4e-81 307.4 344 49.4
EL10Ac7g16033 Beta vulgaris HOM05D005444 ORTHO05D006773 5.3e-81 305.4 215 67.4
Dinv17019 Davidia involucrata HOM05D005444 ORTHO05D006773 4.5e-80 302.4 272 59.2
Dinv42967 Davidia involucrata HOM05D005444 ORTHO05D006773 4.5e-80 302.4 272 59.2
Dinv43132 Davidia involucrata HOM05D005444 ORTHO05D006773 4.5e-80 302.4 272 59.2
Oeu017397.1 Olea europaea HOM05D005444 ORTHO05D006773 1.3e-79 300.8 318 53.1
Lalb_Chr01g0003631 Lupinus albus HOM05D005444 ORTHO05D006773 2.9e-79 299.7 287 54.7
VMungo1080G1107 Vigna mungo HOM05D000758 ORTHO05D002867 7.2e-78 295.0 237 59.1
SEGI_38540 Sequoiadendron giganteum HOM05D005444 ORTHO05D006773 1.6e-77 293.9 239 59.0
arahy.Tifrunner.gnm1.ann1.T6ZDSA Arachis hypogaea HOM05D005444 ORTHO05D006773 1.0e-76 291.2 231 62.3
arahy.Tifrunner.gnm1.ann1.9NI65Y Arachis hypogaea HOM05D005444 ORTHO05D006773 1.8e-76 290.4 231 61.9
PGR102G1676 Punica granatum HOM05D005444 ORTHO05D006773 3.0e-76 289.7 233 62.2
CDE04G2637 Ceratophyllum demersum HOM05D005444 ORTHO05D006773 3.3e-75 286.2 239 57.7
CDE09G1090 Ceratophyllum demersum HOM05D005444 ORTHO05D006773 4.4e-75 285.8 298 51.7
CiPaw.13G092700 Carya illinoinensis HOM05D005444 ORTHO05D006773 5.7e-75 285.4 240 64.2
AUR62001772 Chenopodium quinoa HOM05D005444 ORTHO05D006773 2.4e-73 280.0 264 54.9
Cpa.g.sc81.131 Carica papaya HOM05D005444 ORTHO05D006773 4.1e-73 279.3 291 54.6
Prupe.6G074400 Prunus persica HOM05D005444 ORTHO05D006773 7.7e-72 275.0 234 62.4
MELO3C020623.2 Cucumis melo HOM05D005444 ORTHO05D006773 1.0e-71 274.6 304 49.7
FAN25G3546 Fragaria x ananassa HOM05D005444 ORTHO05D006773 2.1e-69 266.9 229 58.1
Thecc.09G320000 Theobroma cacao HOM05D005444 ORTHO05D006773 2.1e-69 266.9 288 51.4
Duzib168G1171 Durio zibethinus HOM05D005444 ORTHO05D006773 2.6e-67 260.0 279 50.5
Mapoly0050s0097 Marchantia polymorpha HOM05D005444 ORTHO05D006773 3.3e-67 259.6 264 48.1
Psat5g286680 Pisum sativum HOM05D005444 ORTHO05D006773 3.3e-67 259.6 266 50.8
Hund18899 Selenicereus undatus HOM05D005444 ORTHO05D006773 8.5e-63 245.0 182 66.5
Thhalv10014435m.g Eutrema salsugineum HOM05D005444 ORTHO05D006773 2.5e-62 243.4 235 54.9
Oeu002422.1 Olea europaea HOM05D005444 ORTHO05D006773 2.5e-62 243.4 451 35.9
Ca_19148_v3 Cicer arietinum L. HOM05D005444 ORTHO05D006773 4.2e-62 242.7 182 63.7
HPP92_009462 Vanilla planifolia HOM05D005444 ORTHO05D006773 4.2e-62 242.7 219 55.7
AagrBONN_evm.TU.Sc2ySwM_368.577 Anthoceros agrestis HOM05D005444 ORTHO05D006773 1.2e-59 234.6 238 49.6
Pp3c1_24530 Physcomitrium patens HOM05D005444 ORTHO05D006773 2.4e-57 226.9 232 48.7
TPR.G1035 Trifolium pratense HOM05D005444 ORTHO05D006773 1.6e-53 214.2 191 56.5
PGSC0003DMG402030323 Solanum tuberosum HOM05D005444 ORTHO05D006773 3.4e-51 206.5 158 62.7
Pp3c14_5400 Physcomitrium patens HOM05D005444 ORTHO05D006773 1.7e-50 204.1 229 45.9
SGA_v2.0_scaffold203G41537 Striga asiatica HOM05D005444 ORTHO05D006773 4.1e-49 199.5 166 60.8
CARHR285770 Cardamine hirsuta HOM05D005444 ORTHO05D006773 1.6e-48 197.6 169 56.2
DCAR_005353 Daucus carota HOM05D005444 ORTHO05D006773 5.4e-41 172.6 120 66.7
Zm00001eb355820 Zea mays HOM05D005444 ORTHO05D006773 3.5e-40 169.9 149 51.7
HanXRQChr06g0167871 Helianthus annuus HOM05D000219 ORTHO05D006773 1.6e-37 161.0 90 88.9
HanXRQChr10g0291051 Helianthus annuus HOM05D005444 ORTHO05D006773 2.8e-37 160.2 121 69.4
HanXRQChr10g0291061 Helianthus annuus HOM05D005444 ORTHO05D006773 2.8e-37 160.2 121 69.4
Aqoxy1G00926 Aquilegia oxysepala HOM05D005444 ORTHO05D006773 1.0e-36 158.3 146 53.4
Duzib170G0057 Durio zibethinus HOM05D005444 ORTHO05D006773 6.8e-36 155.6 135 56.3
MCO07G449 Micromonas commoda HOM05D005444 ORTHO05D006773 3.4e-35 153.3 233 39.5
SGA_v2.0_scaffold203G41535 Striga asiatica HOM05D005444 ORTHO05D006773 2.7e-32 143.7 126 61.9
Aqoxy1G00927 Aquilegia oxysepala HOM05D005444 ORTHO05D006773 3.5e-32 143.3 124 60.5
Nn2g13370 Nelumbo nucifera HOM05D005444 ORTHO05D006773 1.0e-31 141.7 86 72.1
Ah.15g097630 Amaranthus hybridus HOM05D005444 ORTHO05D006773 3.9e-31 139.8 84 72.6
unitig_747.g22036 Utricularia gibba HOM05D005444 ORTHO05D006773 3.3e-30 136.7 91 69.2
TPR.G3768 Trifolium pratense HOM05D005444 ORTHO05D006773 5.6e-30 136.0 125 57.6
unitig_747.g22037 Utricularia gibba HOM05D005444 ORTHO05D006773 8.6e-23 112.1 113 50.4
Os05g0110800 Oryza sativa ssp. japonica HOM05D005444 ORTHO05D006773 7.3e-22 109.0 67 76.1
Medtr4g064030 Medicago truncatula HOM05D005444 ORTHO05D006773 3.4e-19 100.1 130 43.8
TAR636G2897 Trochodendron aralioides HOM05D005444 ORTHO05D006773 8.6e-15 85.5 80 57.5
TPR.G27554 Trifolium pratense HOM05D005444 ORTHO05D006773 2.5e-14 84.0 73 53.4
AUR62031662 Chenopodium quinoa HOM05D001050 ORTHO05D001270 7.3e-14 82.4 49 75.5
TPR.G27777 Trifolium pratense HOM05D005444 ORTHO05D006773 2.8e-13 80.5 59 59.3
TPR.G376 Trifolium pratense HOM05D025391 ORTHO05D030167 6.2e-13 79.3 54 61.1
Ah.15g097620 Amaranthus hybridus HOM05D005444 ORTHO05D006773 1.4e-12 78.2 44 75.0
Psat5g007960 Pisum sativum HOM05D005444 ORTHO05D006773 5.2e-12 76.3 72 52.8
Nitab4.5_0003274g0090 Nicotiana tabacum HOM05D003763 ORTHO05D004315 1.5e-11 74.7 246 25.6
Psat4g229040 Pisum sativum HOM05D005444 ORTHO05D006773 3.8e-10 70.1 46 65.2
BcaB01g04587 Brassica carinata HOM05D000021 ORTHO05D000010 3.2e-09 67.0 142 32.4
CBR_g23735 Chara braunii HOM05D003763 ORTHO05D004315 3.2e-09 67.0 217 25.3
COL.COLO4_35627 Corchorus olitorius HOM05D005444 ORTHO05D001950 5.4e-09 66.2 84 45.2
Glyma.11G138967 Glycine max HOM05D005444 ORTHO05D006773 1.1e-06 58.5 73 42.5
C03p13750 Brassica napus HOM05D005444 ORTHO05D042479 1.5e-06 58.2 38 68.4
BolC3t13825H Brassica oleracea HOM05D005444 ORTHO05D042479 1.5e-06 58.2 38 68.4
Phvul.005G077000 Phaseolus vulgaris HOM05D005444 ORTHO05D006773 4.3e-06 56.6 36 61.1
Atru.chr9.1500 Acer truncatum HOM05D003763 ORTHO05D004315 9.6e-06 55.5 238 25.2


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