Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0175371 Helianthus annuus HOM05D007261 ORTHO05D009163 4.8e-132 474.6 248 100.0
ECA246G1741 Erigeron canadensis HOM05D007261 ORTHO05D009163 1.3e-105 386.7 245 80.8
Lsat_1_v5_gn_3_33201 Lactuca sativa HOM05D007261 ORTHO05D009163 6.5e-105 384.4 249 79.9
Rhsim12G0015700 Rhododendron simsii HOM05D007261 ORTHO05D009163 2.0e-90 336.3 227 74.4
vmacro01006 Vaccinium macrocarpon HOM05D007261 ORTHO05D009163 5.9e-90 334.7 235 71.9
PGSC0003DMG400002189 Solanum tuberosum HOM05D007261 ORTHO05D009163 6.6e-89 331.3 227 75.3
Nitab4.5_0005286g0010 Nicotiana tabacum HOM05D007261 ORTHO05D009163 9.5e-88 327.4 227 74.0
Peaxi162Scf01167g00120 Petunia axillaris HOM05D007261 ORTHO05D009163 1.2e-87 327.0 226 73.9
Solyc11g040130.2 Solanum lycopersicum HOM05D007261 ORTHO05D009163 2.1e-87 326.2 227 73.1
Sopen11g017340 Solanum pennellii HOM05D007261 ORTHO05D009163 2.1e-87 326.2 227 73.6
Dinv04437 Davidia involucrata HOM05D007261 ORTHO05D009163 6.1e-87 324.7 238 70.6
CAN.G624.13 Capsicum annuum HOM05D007261 ORTHO05D009163 8.0e-87 324.3 228 73.2
GSVIVG01001121001 Vitis vinifera HOM05D007261 ORTHO05D009163 8.0e-87 324.3 206 79.1
Manes.09G172600 Manihot esculenta HOM05D007261 ORTHO05D009163 1.8e-86 323.2 223 74.0
PGR119G1620 Punica granatum HOM05D007261 ORTHO05D009163 1.8e-86 323.2 208 77.4
FAN07G0598 Fragaria x ananassa HOM05D007261 ORTHO05D009163 4.0e-86 322.0 229 70.3
Prupe.1G211100 Prunus persica HOM05D007261 ORTHO05D009163 4.0e-86 322.0 213 74.6
AT1G44960 Arabidopsis thaliana HOM05D007261 ORTHO05D009163 6.8e-86 321.2 224 71.4
AL1G52610 Arabidopsis lyrata HOM05D007261 ORTHO05D009163 1.2e-85 320.5 224 71.4
Gorai.007G068700 Gossypium raimondii HOM05D007261 ORTHO05D009163 1.2e-85 320.5 233 70.0
Hund12712 Selenicereus undatus HOM05D007261 ORTHO05D009163 1.2e-85 320.5 234 68.8
Aa31LG7G10040 Aethionema arabicum HOM05D007261 ORTHO05D009163 1.5e-85 320.1 224 70.5
AUR62003485 Chenopodium quinoa HOM05D007261 ORTHO05D009163 2.0e-85 319.7 231 67.1
Gohir.D11G063500 Gossypium hirsutum HOM05D007261 ORTHO05D009163 2.0e-85 319.7 233 69.5
Potri.001G070800 Populus trichocarpa HOM05D007261 ORTHO05D009163 2.0e-85 319.7 225 73.8
Migut.K01136 Erythranthe guttata HOM05D007261 ORTHO05D009163 2.6e-85 319.3 229 70.7
FAN12G3746 Fragaria x ananassa HOM05D007261 ORTHO05D009163 2.6e-85 319.3 220 73.2
RcHm_v2.0_Chr4g0428371 Rosa chinensis HOM05D007261 ORTHO05D009163 2.6e-85 319.3 220 72.7
Gohir.A11G059400 Gossypium hirsutum HOM05D007261 ORTHO05D009163 3.4e-85 318.9 233 69.5
Hma1.2p1_0738F.1_g210990 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 3.4e-85 318.9 245 68.2
Sabra01G0049700 Salix brachista HOM05D007261 ORTHO05D009163 4.4e-85 318.5 225 72.0
SalBow2G2703 Salvia bowleyana HOM05D007261 ORTHO05D009163 4.4e-85 318.5 252 65.9
FvH4_4g22120 Fragaria vesca HOM05D007261 ORTHO05D009163 5.8e-85 318.2 220 72.7
Aqoxy5G04229 Aquilegia oxysepala HOM05D007261 ORTHO05D009163 7.5e-85 317.8 231 68.0
Carub.0001s3543 Capsella rubella HOM05D007261 ORTHO05D009163 9.8e-85 317.4 224 71.0
CARHR036160 Cardamine hirsuta HOM05D007261 ORTHO05D009163 9.8e-85 317.4 224 68.8
Eucgr.J01661 Eucalyptus grandis HOM05D007261 ORTHO05D009163 9.8e-85 317.4 231 70.6
EL10Ac6g15388 Beta vulgaris HOM05D007261 ORTHO05D009163 1.3e-84 317.0 217 71.4
FAN17G2458 Fragaria x ananassa HOM05D007261 ORTHO05D009163 1.3e-84 317.0 230 70.0
Cc11_g14850 Coffea canephora HOM05D007261 ORTHO05D009163 1.7e-84 316.6 238 68.9
AUR62017794 Chenopodium quinoa HOM05D007261 ORTHO05D009163 2.2e-84 316.2 230 67.8
CsaV3_3G043490 Cucumis sativus L. HOM05D007261 ORTHO05D009163 2.2e-84 316.2 226 70.8
Thecc.01G239300 Theobroma cacao HOM05D007261 ORTHO05D009163 4.9e-84 315.1 205 76.6
MD16G1145000 Malus domestica HOM05D007261 ORTHO05D009163 6.4e-84 314.7 224 72.3
MD13G1134400 Malus domestica HOM05D007261 ORTHO05D009163 8.3e-84 314.3 201 77.1
Cpa.g.sc38.54 Carica papaya HOM05D007261 ORTHO05D009163 1.1e-83 313.9 226 68.6
MELO3C026753.2 Cucumis melo HOM05D007261 ORTHO05D009163 1.1e-83 313.9 235 70.2
BcaB07g33898 Brassica carinata HOM05D007261 ORTHO05D009163 1.9e-83 313.2 227 68.7
Thhalv10011722m.g Eutrema salsugineum HOM05D007261 ORTHO05D009163 2.4e-83 312.8 225 69.3
Ah.03g147240 Amaranthus hybridus HOM05D007261 ORTHO05D009163 4.1e-83 312.0 226 70.8
Sp1g33800 Schrenkiella parvula HOM05D007261 ORTHO05D009163 4.1e-83 312.0 227 67.8
BraA10t42964Z Brassica rapa HOM05D007261 ORTHO05D009163 7.0e-83 311.2 227 67.8
Sed0025955 Sechium edule HOM05D007261 ORTHO05D009163 7.0e-83 311.2 227 71.8
A10p07140 Brassica napus HOM05D007261 ORTHO05D009163 9.2e-83 310.8 227 67.8
BolC6t35245H Brassica oleracea HOM05D007261 ORTHO05D009163 1.2e-82 310.5 224 68.8
Lj3A1078G18 Lonicera japonica HOM05D007261 ORTHO05D009163 1.2e-82 310.5 204 74.0
QL03p048277 Quercus lobata HOM05D007261 ORTHO05D009163 1.2e-82 310.5 206 73.3
TAR629G2200 Trochodendron aralioides HOM05D007261 ORTHO05D009163 1.2e-82 310.5 231 69.7
C06p01120 Brassica napus HOM05D007261 ORTHO05D009163 1.6e-82 310.1 224 68.8
Nn4g22065 Nelumbo nucifera HOM05D007261 ORTHO05D009163 1.6e-82 310.1 229 70.3
Ciclev10029098m.g Citrus clementina HOM05D007261 ORTHO05D009163 2.0e-82 309.7 227 67.8
Atru.chr12.1480 Acer truncatum HOM05D007261 ORTHO05D009163 3.5e-82 308.9 236 66.5
Duzib264G0686 Durio zibethinus HOM05D007261 ORTHO05D009163 3.5e-82 308.9 234 68.4
PSO017G6922 Papaver somniferum HOM05D007261 ORTHO05D009163 3.5e-82 308.9 225 70.2
CSS0010700 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 4.6e-82 308.5 225 69.3
Lj1g0023925 Lotus japonicus HOM05D007261 ORTHO05D009163 7.8e-82 307.8 226 67.3
Oeu021934.1 Olea europaea HOM05D007261 ORTHO05D009163 1.0e-81 307.4 241 66.4
PSO478G2703 Papaver somniferum HOM05D007261 ORTHO05D009163 1.0e-81 307.4 230 69.1
Cfa009475 Carpinus fangiana HOM05D007261 ORTHO05D009163 1.3e-81 307.0 223 71.7
ClCG10G013090 Citrullus lanatus HOM05D007261 ORTHO05D009163 1.3e-81 307.0 235 70.6
HPP92_020118 Vanilla planifolia HOM05D007261 ORTHO05D009163 1.7e-81 306.6 233 66.1
CSS0041929 Camellia sinensis var. sinensis HOM05D007261 ORTHO05D009163 2.3e-81 306.2 225 68.9
Lalb_Chr04g0257321 Lupinus albus HOM05D007261 ORTHO05D009163 2.3e-81 306.2 245 65.3
arahy.Tifrunner.gnm1.ann1.EWZS38 Arachis hypogaea HOM05D007261 ORTHO05D009163 3.9e-81 305.4 237 65.4
arahy.Tifrunner.gnm1.ann1.X3R9N8 Arachis hypogaea HOM05D007261 ORTHO05D009163 3.9e-81 305.4 237 65.4
TWI18G1332 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 5.0e-81 305.1 226 68.6
Ca_04086_v3 Cicer arietinum L. HOM05D007261 ORTHO05D009163 8.6e-81 304.3 233 65.2
CANSAT01G0240 Cannabis sativa HOM05D007261 ORTHO05D009163 1.1e-80 303.9 225 69.3
Psat3g206640 Pisum sativum HOM05D007261 ORTHO05D009163 7.3e-80 301.2 236 65.3
Phvul.008G004000 Phaseolus vulgaris HOM05D007261 ORTHO05D009163 9.5e-80 300.8 231 64.9
Glyma.18G298600 Glycine max HOM05D007261 ORTHO05D009163 1.6e-79 300.1 226 65.9
TWI36G0866 Tripterygium wilfordii HOM05D007261 ORTHO05D009163 1.8e-78 296.6 234 66.7
ATR0582G128 Amborella trichopoda HOM05D007261 ORTHO05D009163 3.1e-78 295.8 243 63.8
Medtr7g006790 Medicago truncatula HOM05D007261 ORTHO05D009163 8.9e-78 294.3 236 63.1
Medtr7g006800 Medicago truncatula HOM05D007261 ORTHO05D009163 8.9e-78 294.3 236 63.1
Glyma.08G363400 Glycine max HOM05D007261 ORTHO05D009163 1.5e-77 293.5 228 63.6
TPR.G9720 Trifolium pratense HOM05D007261 ORTHO05D009163 1.5e-77 293.5 213 68.5
unitig_26.g10437 Utricularia gibba HOM05D000361 ORTHO05D007482 7.5e-77 291.2 228 64.0
THA.LOC104801410 Tarenaya hassleriana HOM05D007261 ORTHO05D009163 5.4e-75 285.0 232 63.8
Sc17g0001500 Simmondsia chinensis HOM05D007261 ORTHO05D009163 9.2e-75 284.3 204 70.6
Zm00001eb197910 Zea mays HOM05D007261 ORTHO05D009163 2.7e-74 282.7 209 67.0
Os11g0537300 Oryza sativa ssp. japonica HOM05D007261 ORTHO05D009163 1.3e-73 280.4 239 62.3
VMungo1383G1401 Vigna mungo HOM05D007261 ORTHO05D009163 2.3e-73 279.6 226 64.6
CDE05G0176 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 6.6e-73 278.1 238 59.7
Haze_12532 Corylus avellana HOM05D007261 ORTHO05D009163 5.1e-65 251.9 365 43.3
SEGI_21849 Sequoiadendron giganteum HOM05D007261 ORTHO05D009163 9.5e-64 247.7 198 62.6
SMO351G0136 Selaginella moellendorffii HOM05D007261 ORTHO05D009163 1.5e-61 240.4 201 59.7
Pp3c19_21680 Physcomitrium patens HOM05D007261 ORTHO05D009163 8.4e-60 234.6 201 58.2
CiPaw.05G097700 Carya illinoinensis HOM05D007261 ORTHO05D009163 1.4e-59 233.8 238 55.9
AagrBONN_evm.TU.Sc2ySwM_228.5286 Anthoceros agrestis HOM05D007261 ORTHO05D009163 2.4e-59 233.0 212 59.0
Mapoly0073s0041 Marchantia polymorpha HOM05D007261 ORTHO05D009163 4.2e-59 232.3 212 53.8
HPP92_020128 Vanilla planifolia HOM05D007261 ORTHO05D009163 3.3e-56 222.6 196 60.7
Nitab4.5_0002113g0010 Nicotiana tabacum HOM05D000361 ORTHO05D007482 4.3e-48 195.7 164 65.9
BcaC08g42890 Brassica carinata HOM05D007261 ORTHO05D009163 2.1e-47 193.4 133 71.4
CBR_g44525 Chara braunii HOM05D007261 ORTHO05D009163 1.2e-45 187.6 245 44.1
Potri.003G159901 Populus trichocarpa HOM05D007261 ORTHO05D009163 1.2e-37 161.0 98 78.6
Actinidia30573 Actinidia chinensis HOM05D007261 ORTHO05D009163 6.4e-36 155.2 111 67.6
CDE05G1764 Ceratophyllum demersum HOM05D007261 ORTHO05D009163 6.2e-31 138.7 114 57.9
PRCOL_00004129 Prasinoderma coloniale HOM05D007261 ORTHO05D009163 9.0e-22 108.2 227 34.8
Hma1.2p1_0738F.1_g211000 Hydrangea macrophylla HOM05D007261 ORTHO05D009163 2.5e-19 100.1 80 67.5
PRCOL_00001953 Prasinoderma coloniale HOM05D005243 ORTHO05D006670 2.1e-10 70.5 210 28.1
HanXRQChr01g0002331 Helianthus annuus HOM05D001530 ORTHO05D003676 3.7e-07 59.7 235 26.8
Cre06.g262000 Chlamydomonas reinhardtii HOM05D001530 ORTHO05D003676 1.8e-06 57.4 146 28.1
Lalb_Chr13g0304101 Lupinus albus HOM05D001530 ORTHO05D003676 3.1e-06 56.6 193 25.9
Cre01.g043050 Chlamydomonas reinhardtii HOM05D005243 ORTHO05D006670 4.1e-06 56.2 165 27.9
FAN27G3491 Fragaria x ananassa HOM05D001530 ORTHO05D003676 5.3e-06 55.8 194 27.8
RcHm_v2.0_Chr6g0291411 Rosa chinensis HOM05D001530 ORTHO05D003676 5.3e-06 55.8 188 27.7
Cfa006116 Carpinus fangiana HOM05D001530 ORTHO05D003676 7.0e-06 55.5 199 27.1
MD03G1267800 Malus domestica HOM05D001530 ORTHO05D003676 7.0e-06 55.5 199 27.6


User provided reference genes

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