Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0175191 Helianthus annuus HOM05D004600 ORTHO05D005471 1.6e-53 212.6 114 100.0
ECA234G0066 Erigeron canadensis HOM05D004600 ORTHO05D005471 3.3e-51 204.9 114 94.7
HanXRQChr17g0540501 Helianthus annuus HOM05D004600 ORTHO05D005471 1.6e-50 202.6 114 93.9
Lsat_1_v5_gn_3_31540 Lactuca sativa HOM05D004600 ORTHO05D005471 3.4e-48 194.9 114 91.2
QL02p099100 Quercus lobata HOM05D004600 ORTHO05D005471 4.1e-46 188.0 113 84.1
Thecc.05G234100 Theobroma cacao HOM05D004600 ORTHO05D005471 9.2e-46 186.8 114 83.3
Cfa003694 Carpinus fangiana HOM05D004600 ORTHO05D005471 1.2e-45 186.4 114 81.6
Gohir.D11G317800 Gossypium hirsutum HOM05D004600 ORTHO05D005471 4.6e-45 184.5 114 81.6
Gorai.007G347600 Gossypium raimondii HOM05D004600 ORTHO05D005471 4.6e-45 184.5 114 81.6
DCAR_002257 Daucus carota HOM05D004600 ORTHO05D005471 6.0e-45 184.1 114 82.5
GSVIVG01018312001 Vitis vinifera HOM05D004600 ORTHO05D005471 1.3e-44 183.0 114 80.7
CiPaw.11G057300 Carya illinoinensis HOM05D004600 ORTHO05D005471 1.7e-44 182.6 114 80.7
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 3.0e-44 181.8 110 83.6
Duzib177G1065 Durio zibethinus HOM05D004600 ORTHO05D005471 3.0e-44 181.8 114 82.5
Hma1.2p1_2581F.1_g324750 Hydrangea macrophylla HOM05D004600 ORTHO05D005471 3.0e-44 181.8 112 81.2
Eucgr.E01748 Eucalyptus grandis HOM05D004600 ORTHO05D005471 3.9e-44 181.4 114 79.8
Gohir.A11G302200 Gossypium hirsutum HOM05D004600 ORTHO05D005471 5.0e-44 181.0 114 79.8
MD07G1080900 Malus domestica HOM05D004600 ORTHO05D005471 5.0e-44 181.0 115 82.6
Prupe.2G105900 Prunus persica HOM05D004600 ORTHO05D005471 6.6e-44 180.6 115 81.7
EL10Ac2g03665 Beta vulgaris HOM05D004600 ORTHO05D005471 8.6e-44 180.3 114 80.7
FvH4_7g07840 Fragaria vesca HOM05D004600 ORTHO05D005471 8.6e-44 180.3 115 80.9
FvH4_7g08250 Fragaria vesca HOM05D004600 ORTHO05D005471 8.6e-44 180.3 115 80.9
FAN01G2185 Fragaria x ananassa HOM05D004600 ORTHO05D005471 8.6e-44 180.3 115 80.9
FAN06G4779 Fragaria x ananassa HOM05D004600 ORTHO05D005471 8.6e-44 180.3 115 80.9
MD02G1232800 Malus domestica HOM05D004600 ORTHO05D005471 8.6e-44 180.3 115 80.9
CSS0000756 Camellia sinensis var. sinensis HOM05D004600 ORTHO05D005471 1.1e-43 179.9 111 81.1
Glyma.12G219600 Glycine max HOM05D004600 ORTHO05D005471 1.5e-43 179.5 112 80.4
arahy.Tifrunner.gnm1.ann1.FL4BP3 Arachis hypogaea HOM05D004600 ORTHO05D005471 2.5e-43 178.7 114 78.9
Ca_06414_v3 Cicer arietinum L. HOM05D004600 ORTHO05D005471 2.5e-43 178.7 115 80.0
Phvul.008G274500 Phaseolus vulgaris HOM05D004600 ORTHO05D005471 2.5e-43 178.7 114 78.9
Lalb_Chr10g0107261 Lupinus albus HOM05D004600 ORTHO05D005471 4.3e-43 177.9 114 78.1
THA.LOC104821611 Tarenaya hassleriana HOM05D004600 ORTHO05D005471 4.3e-43 177.9 114 79.8
THA.LOC104805733 Tarenaya hassleriana HOM05D004600 ORTHO05D005471 5.6e-43 177.6 114 80.7
arahy.Tifrunner.gnm1.ann1.8V97K8 Arachis hypogaea HOM05D004600 ORTHO05D005471 7.3e-43 177.2 114 78.1
TPR.G31719 Trifolium pratense HOM05D004600 ORTHO05D005471 9.5e-43 176.8 115 79.1
Actinidia30941 Actinidia chinensis HOM05D004600 ORTHO05D005471 1.2e-42 176.4 114 78.9
RcHm_v2.0_Chr1g0341631 Rosa chinensis HOM05D004600 ORTHO05D005471 1.2e-42 176.4 115 79.1
CSS0047927 Camellia sinensis var. sinensis HOM05D004600 ORTHO05D005471 1.6e-42 176.0 111 80.2
Ciclev10033122m.g Citrus clementina HOM05D004600 ORTHO05D005471 1.6e-42 176.0 114 79.8
Glyma.13G281700 Glycine max HOM05D004600 ORTHO05D005471 1.6e-42 176.0 114 78.9
Nitab4.5_0006200g0020 Nicotiana tabacum HOM05D004600 ORTHO05D005471 1.6e-42 176.0 112 78.6
TWI32G0106 Tripterygium wilfordii HOM05D004600 ORTHO05D005471 1.6e-42 176.0 114 78.9
TWI34G1465 Tripterygium wilfordii HOM05D004600 ORTHO05D005471 1.6e-42 176.0 114 78.9
AT2G30410 Arabidopsis thaliana HOM05D004600 ORTHO05D005471 2.1e-42 175.6 114 79.8
Sopen01g030360 Solanum pennellii HOM05D004600 ORTHO05D005471 2.8e-42 175.3 112 77.7
Solyc01g068400.3 Solanum lycopersicum HOM05D004600 ORTHO05D005471 3.6e-42 174.9 112 77.7
PGR042G2124 Punica granatum HOM05D004600 ORTHO05D005471 8.1e-42 173.7 114 76.3
Hund03244 Selenicereus undatus HOM05D004600 ORTHO05D005471 8.1e-42 173.7 110 80.0
PGSC0003DMG400017954 Solanum tuberosum HOM05D004600 ORTHO05D005471 8.1e-42 173.7 112 76.8
Manes.08G156800 Manihot esculenta HOM05D004600 ORTHO05D005471 1.1e-41 173.3 114 75.4
Carub.0004s1157 Capsella rubella HOM05D004600 ORTHO05D005471 1.4e-41 172.9 114 77.2
VMungo0647G0484 Vigna mungo HOM05D004600 ORTHO05D005471 1.4e-41 172.9 114 76.3
Oeu011239.1 Olea europaea HOM05D004600 ORTHO05D005471 1.8e-41 172.6 114 77.2
ClCG06G000640 Citrullus lanatus HOM05D004600 ORTHO05D005471 2.3e-41 172.2 114 77.2
Thhalv10017954m.g Eutrema salsugineum HOM05D004600 ORTHO05D005471 4.0e-41 171.4 114 78.9
Cpa.g.sc73.56 Carica papaya HOM05D004600 ORTHO05D005471 5.2e-41 171.0 114 77.2
DCAR_002240 Daucus carota HOM05D000064 ORTHO05D001307 5.2e-41 171.0 106 82.1
Ciclev10017245m.g Citrus clementina HOM05D004600 ORTHO05D005471 6.8e-41 170.6 114 78.1
CANSAT56G0524 Cannabis sativa HOM05D004600 ORTHO05D005471 8.9e-41 170.2 113 77.9
LjContig00272g0018481 Lotus japonicus HOM05D004600 ORTHO05D005471 8.9e-41 170.2 112 77.7
Sed0013640 Sechium edule HOM05D004600 ORTHO05D005471 8.9e-41 170.2 114 74.6
PSO782G3599 Papaver somniferum HOM05D004600 ORTHO05D005471 2.0e-40 169.1 114 74.6
MBI04_g38566_MAGBIO Magnolia biondii HOM05D004600 ORTHO05D005471 2.6e-40 168.7 114 74.6
SalBow5G2739 Salvia bowleyana HOM05D004600 ORTHO05D005471 2.6e-40 168.7 114 72.8
SalBow5G4978 Salvia bowleyana HOM05D004600 ORTHO05D005471 2.6e-40 168.7 114 72.8
CARHR123850 Cardamine hirsuta HOM05D004600 ORTHO05D005471 3.4e-40 168.3 112 76.8
Medtr5g094290 Medicago truncatula HOM05D004600 ORTHO05D005471 3.4e-40 168.3 115 75.7
PSO063G0817 Papaver somniferum HOM05D004600 ORTHO05D005471 3.4e-40 168.3 114 74.6
CANSAT80G0198 Cannabis sativa HOM05D004600 ORTHO05D005471 4.4e-40 167.9 113 77.0
AUR62010214 Chenopodium quinoa HOM05D004600 ORTHO05D005471 4.4e-40 167.9 110 75.5
AUR62023888 Chenopodium quinoa HOM05D004600 ORTHO05D005471 4.4e-40 167.9 110 75.5
SpUn0968_0010 Schrenkiella parvula HOM05D004600 ORTHO05D005471 4.4e-40 167.9 115 78.3
TAR374G1537 Trochodendron aralioides HOM05D004600 ORTHO05D005471 5.8e-40 167.5 114 76.3
Actinidia05778 Actinidia chinensis HOM05D000441 ORTHO05D005471 7.5e-40 167.2 104 81.7
Potri.013G071100 Populus trichocarpa HOM05D004600 ORTHO05D005471 7.5e-40 167.2 113 74.3
Sabra13G0062000 Salix brachista HOM05D004600 ORTHO05D005471 9.8e-40 166.8 113 74.3
Migut.N01726 Erythranthe guttata HOM05D004600 ORTHO05D005471 1.3e-39 166.4 111 74.8
Rhsim07G0038000 Rhododendron simsii HOM05D004600 ORTHO05D005471 1.3e-39 166.4 111 75.7
Sed0004677 Sechium edule HOM05D004600 ORTHO05D005471 1.3e-39 166.4 114 74.6
Manes.09G132900 Manihot esculenta HOM05D004600 ORTHO05D005471 1.7e-39 166.0 112 72.3
CAN.G179.37 Capsicum annuum HOM05D004600 ORTHO05D005471 2.2e-39 165.6 112 75.0
Aqoxy3G02625 Aquilegia oxysepala HOM05D004600 ORTHO05D005471 2.9e-39 165.2 114 74.6
Aqoxy4G01604 Aquilegia oxysepala HOM05D004600 ORTHO05D005471 2.9e-39 165.2 114 74.6
AL136U10020 Arabidopsis lyrata HOM05D004600 ORTHO05D005471 3.7e-39 164.9 114 75.4
AL4G25280 Arabidopsis lyrata HOM05D004600 ORTHO05D005471 3.7e-39 164.9 114 75.4
Carub.0004s0600 Capsella rubella HOM05D004600 ORTHO05D005471 4.9e-39 164.5 110 79.1
Cc10_g08750 Coffea canephora HOM05D004600 ORTHO05D005471 4.9e-39 164.5 108 75.9
Medtr5g094860 Medicago truncatula HOM05D004600 ORTHO05D005471 4.9e-39 164.5 115 73.9
FAN10G3323 Fragaria x ananassa HOM05D004600 ORTHO05D005471 6.4e-39 164.1 146 63.7
Peaxi162Scf00309g00111 Petunia axillaris HOM05D004600 ORTHO05D005471 6.4e-39 164.1 112 74.1
MSTRG.28140 Avicennia marina HOM05D004600 ORTHO05D005471 8.3e-39 163.7 110 74.5
Nn6g33746 Nelumbo nucifera HOM05D004600 ORTHO05D005471 1.1e-38 163.3 114 75.4
SalBow2G1105 Salvia bowleyana HOM05D004600 ORTHO05D005471 2.4e-38 162.2 114 71.1
ATR0594G180 Amborella trichopoda HOM05D004600 ORTHO05D005471 7.1e-38 160.6 114 72.8
MBI14_g39049_MAGBIO Magnolia biondii HOM05D004600 ORTHO05D005471 7.1e-38 160.6 114 72.8
CDE02G3136 Ceratophyllum demersum HOM05D004600 ORTHO05D005471 9.2e-38 160.2 114 75.4
A05p15020 Brassica napus HOM05D004600 ORTHO05D005471 1.6e-37 159.5 114 76.3
BolC4t23549H Brassica oleracea HOM05D004600 ORTHO05D005471 1.6e-37 159.5 114 76.3
BraA05t20428Z Brassica rapa HOM05D004600 ORTHO05D005471 1.6e-37 159.5 114 76.3
CsaV3_6G006410 Cucumis sativus L. HOM05D004600 ORTHO05D005471 1.6e-37 159.5 109 74.3
C04p20100 Brassica napus HOM05D004600 ORTHO05D005471 3.5e-37 158.3 114 75.4
MELO3C022478.2 Cucumis melo HOM05D004600 ORTHO05D005471 3.5e-37 158.3 114 71.1
HPP92_003331 Vanilla planifolia HOM05D004600 ORTHO05D005471 3.5e-37 158.3 114 72.8
Nitab4.5_0002801g0010 Nicotiana tabacum HOM05D004600 ORTHO05D005471 4.6e-37 157.9 143 60.1
BcaC02g11135 Brassica carinata HOM05D004600 ORTHO05D005471 7.8e-37 157.1 114 75.4
BcaB02g10324 Brassica carinata HOM05D004600 ORTHO05D005471 1.7e-36 156.0 114 74.6
vmacro13519 Vaccinium macrocarpon HOM05D004600 ORTHO05D005471 6.6e-36 154.1 139 61.2
BcaB01g04106 Brassica carinata HOM05D004600 ORTHO05D005471 1.5e-35 152.9 114 73.7
Peaxi162Scf00519g00014 Petunia axillaris HOM05D004600 ORTHO05D005471 1.2e-34 149.8 97 79.4
SEGI_02498 Sequoiadendron giganteum HOM05D004600 ORTHO05D005471 4.7e-34 147.9 114 68.4
Aa31LG2G2070 Aethionema arabicum HOM05D004600 ORTHO05D005471 8.1e-34 147.1 109 69.7
COL.COLO4_33093 Corchorus olitorius HOM05D004600 ORTHO05D005471 3.1e-33 145.2 91 80.2
SEGI_10368 Sequoiadendron giganteum HOM05D004600 ORTHO05D005471 1.5e-32 142.9 114 66.7
Atru.chr2.1648 Acer truncatum HOM05D004600 ORTHO05D005471 2.6e-32 142.1 80 88.8
Haze_15791 Corylus avellana HOM05D004600 ORTHO05D005471 4.4e-32 141.4 80 90.0
Duzib106G0868 Durio zibethinus HOM05D004600 ORTHO05D005471 3.8e-31 138.3 77 92.2
Aa31LG5G6310 Aethionema arabicum HOM05D004600 ORTHO05D005471 4.9e-31 137.9 77 90.9
Os02g0816500 Oryza sativa ssp. japonica HOM05D004600 ORTHO05D005471 8.4e-31 137.1 84 83.3
BcaNung06780 Brassica carinata HOM05D004600 ORTHO05D005471 1.2e-29 133.3 100 73.0
Zm00001eb258870 Zea mays HOM05D004600 ORTHO05D005471 1.2e-29 133.3 77 87.0
arahy.Tifrunner.gnm1.ann1.AN2C62 Arachis hypogaea HOM05D004600 ORTHO05D005471 1.6e-29 132.9 94 73.4
unitig_22.g5795 Utricularia gibba HOM05D004600 ORTHO05D005471 1.7e-28 129.4 107 60.7
Psat2g010800 Pisum sativum HOM05D004600 ORTHO05D005471 6.6e-28 127.5 83 77.1
Psat6g223560 Pisum sativum HOM05D004600 ORTHO05D005471 6.6e-28 127.5 83 77.1
COL.COLO4_34174 Corchorus olitorius HOM05D004600 ORTHO05D005471 4.3e-27 124.8 72 88.9
arahy.Tifrunner.gnm1.ann1.TEM6YH Arachis hypogaea HOM05D004600 ORTHO05D005471 3.6e-26 121.7 77 80.5
RcHm_v2.0_Chr1g0341741 Rosa chinensis HOM05D004600 ORTHO05D005471 4.0e-25 118.2 65 90.8
SMO140G0024 Selaginella moellendorffii HOM05D004600 ORTHO05D005471 3.8e-23 111.7 77 70.1
Mapoly0038s0031 Marchantia polymorpha HOM05D004600 ORTHO05D005471 1.1e-22 110.2 107 55.1
CBR_g52286 Chara braunii HOM05D004600 ORTHO05D005471 1.2e-21 106.7 99 59.6
arahy.Tifrunner.gnm1.ann1.M3PSJH Arachis hypogaea HOM05D004254 ORTHO05D005184 4.6e-21 104.8 72 70.8
PSO017G3083 Papaver somniferum HOM05D004600 ORTHO05D005471 7.8e-21 104.0 114 51.8
RhsimUnG0214300 Rhododendron simsii HOM05D004600 ORTHO05D005471 1.3e-20 103.2 112 50.0
AagrBONN_evm.TU.Sc2ySwM_368.563 Anthoceros agrestis HOM05D001974 ORTHO05D001995 8.7e-20 100.5 103 54.4
BcaNung05668 Brassica carinata HOM05D004600 ORTHO05D005471 1.9e-19 99.4 77 68.8
BcaNung05666 Brassica carinata HOM05D004600 ORTHO05D005471 7.3e-19 97.4 77 68.8
Pp3c8_15900 Physcomitrium patens HOM05D004600 ORTHO05D005471 2.8e-18 95.5 109 45.0
COL.COLO4_33692 Corchorus olitorius HOM05D004600 ORTHO05D005471 6.2e-18 94.4 100 55.0
AUR62013210 Chenopodium quinoa HOM05D004600 ORTHO05D005471 2.4e-17 92.4 59 74.6
Sc01g0008330 Simmondsia chinensis HOM05D004600 ORTHO05D005471 9.0e-17 90.5 62 69.4
Cre16.g670800 Chlamydomonas reinhardtii HOM05D004600 ORTHO05D005471 9.9e-16 87.0 106 49.1
FAN01G1805 Fragaria x ananassa HOM05D004600 ORTHO05D005471 2.9e-15 85.5 57 77.2
Pp3c5_8620 Physcomitrium patens HOM05D004600 ORTHO05D005471 6.4e-15 84.3 82 51.2
HanXRQChr10g0286821 Helianthus annuus HOM05D004600 ORTHO05D005471 1.4e-14 83.2 43 97.7
RcHm_v2.0_Chr1g0341961 Rosa chinensis HOM05D004600 ORTHO05D005471 5.4e-14 81.3 51 82.4
HanXRQChr02g0044381 Helianthus annuus HOM05D004600 ORTHO05D005471 1.2e-13 80.1 43 93.0
MBI18_g40062_MAGBIO Magnolia biondii HOM05D004600 ORTHO05D005471 2.7e-13 79.0 45 86.7
Pp3c15_6440 Physcomitrium patens HOM05D004600 ORTHO05D005471 2.7e-13 79.0 104 44.2
RcHm_v2.0_Chr4g0446751 Rosa chinensis HOM05D004600 ORTHO05D005471 3.5e-13 78.6 50 82.0
MCO15G208 Micromonas commoda HOM05D004600 ORTHO05D005471 3.0e-12 75.5 101 47.5
RcHm_v2.0_Chr3g0457191 Rosa chinensis HOM05D004600 ORTHO05D005471 3.9e-12 75.1 51 76.5
RcHm_v2.0_Chr1g0342531 Rosa chinensis HOM05D004600 ORTHO05D005471 6.7e-12 74.3 43 86.0
SGA_v2.0_scaffold77G25264 Striga asiatica HOM05D000763 ORTHO05D000599 8.7e-12 73.9 95 48.4
COL.COLO4_33704 Corchorus olitorius HOM05D004600 ORTHO05D005471 1.1e-11 73.6 92 52.2
Oeu019263.1 Olea europaea HOM05D004600 ORTHO05D005471 2.5e-11 72.4 55 63.6
COL.COLO4_28352 Corchorus olitorius HOM05D004600 ORTHO05D005471 4.3e-11 71.6 65 56.9
C03p20070 Brassica napus HOM05D004600 ORTHO05D005471 2.1e-10 69.3 109 47.7
arahy.Tifrunner.gnm1.ann1.3LH6CZ Arachis hypogaea HOM05D004600 ORTHO05D021519 4.8e-10 68.2 92 42.4
PRCOL_00002235 Prasinoderma coloniale HOM05D004600 ORTHO05D005471 8.1e-10 67.4 95 43.2
BcaC01g05996 Brassica carinata HOM05D004600 ORTHO05D005471 2.4e-09 65.9 95 49.5
A03p17010 Brassica napus HOM05D004600 ORTHO05D005471 6.9e-09 64.3 60 60.0
Pp3c12_22810 Physcomitrium patens HOM05D004600 ORTHO05D005471 3.4e-08 62.0 59 49.2


User provided reference genes

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