Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0173711 Helianthus annuus HOM05D000651 ORTHO05D001126 1.3e-35 152.5 80 100.0
HanXRQChr14g0455731 Helianthus annuus HOM05D000651 ORTHO05D001126 5.5e-13 77.4 41 92.7
HanXRQChr05g0161301 Helianthus annuus HOM05D000651 ORTHO05D001126 1.5e-10 69.3 41 82.9
HanXRQChr08g0207971 Helianthus annuus HOM05D000651 ORTHO05D001126 3.3e-10 68.2 41 80.5
ECA238G4584 Erigeron canadensis HOM05D000651 ORTHO05D001126 1.3e-09 66.2 41 80.5
Rhsim09G0147200 Rhododendron simsii HOM05D000651 ORTHO05D001126 2.2e-09 65.5 41 78.0
VMungo0720G2831 Vigna mungo HOM05D000651 ORTHO05D001126 3.7e-09 64.7 40 72.5
FvH4_7g18691 Fragaria vesca HOM05D000651 ORTHO05D001126 6.3e-09 63.9 40 72.5
Glyma.10G207300 Glycine max HOM05D000651 ORTHO05D001126 8.2e-09 63.5 40 70.0
Phvul.007G099400 Phaseolus vulgaris HOM05D000651 ORTHO05D001126 8.2e-09 63.5 40 70.0
Lsat_1_v5_gn_2_113081 Lactuca sativa HOM05D000651 ORTHO05D001126 1.1e-08 63.2 39 74.4
Lalb_Chr02g0152051 Lupinus albus HOM05D000651 ORTHO05D001126 1.1e-08 63.2 40 70.0
DCAR_006406 Daucus carota HOM05D000651 ORTHO05D001126 1.4e-08 62.8 41 70.7
FAN03G1696 Fragaria x ananassa HOM05D000651 ORTHO05D001126 1.4e-08 62.8 40 70.0
FAN06G1796 Fragaria x ananassa HOM05D000651 ORTHO05D001126 1.4e-08 62.8 40 70.0
FAN10G0458 Fragaria x ananassa HOM05D000651 ORTHO05D001126 1.4e-08 62.8 40 70.0
FAN10G1324 Fragaria x ananassa HOM05D000651 ORTHO05D001126 1.4e-08 62.8 40 70.0
HanXRQChr12g0376901 Helianthus annuus HOM05D000651 ORTHO05D001126 1.8e-08 62.4 41 70.7
Lj5g0004289 Lotus japonicus HOM05D000651 ORTHO05D001126 1.8e-08 62.4 40 72.5
CSS0003298 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D001126 2.4e-08 62.0 41 70.7
CSS0028190 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D001126 2.4e-08 62.0 41 70.7
Lj2C21T6 Lonicera japonica HOM05D000651 ORTHO05D001126 2.4e-08 62.0 41 73.2
Solyc11g008280.3 Solanum lycopersicum HOM05D000651 ORTHO05D001126 2.4e-08 62.0 41 68.3
Sopen11g004090 Solanum pennellii HOM05D000651 ORTHO05D001126 2.4e-08 62.0 41 68.3
vmacro04832 Vaccinium macrocarpon HOM05D000651 ORTHO05D001126 2.4e-08 62.0 41 73.2
vmacro10249 Vaccinium macrocarpon HOM05D000651 ORTHO05D001126 2.4e-08 62.0 41 73.2
CSS0002849 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D001126 3.1e-08 61.6 41 70.7
RcHm_v2.0_Chr1g0362481 Rosa chinensis HOM05D000651 ORTHO05D001126 3.1e-08 61.6 40 70.0
Ca_10537_v3 Cicer arietinum L. HOM05D000651 ORTHO05D001126 5.3e-08 60.8 40 67.5
FAN01G1722 Fragaria x ananassa HOM05D000651 ORTHO05D001126 5.3e-08 60.8 40 67.5
FAN06G3799 Fragaria x ananassa HOM05D000651 ORTHO05D001126 5.3e-08 60.8 38 71.1
Lalb_Chr03g0036241 Lupinus albus HOM05D000651 ORTHO05D001126 5.3e-08 60.8 40 67.5
MD07G1169500 Malus domestica HOM05D000651 ORTHO05D001126 5.3e-08 60.8 40 67.5
Manes.07G133132 Manihot esculenta HOM05D000651 ORTHO05D001126 5.3e-08 60.8 40 67.5
arahy.Tifrunner.gnm1.ann1.RHLQ3D Arachis hypogaea HOM05D000651 ORTHO05D001126 7.0e-08 60.5 40 67.5
Eucgr.G02873 Eucalyptus grandis HOM05D000651 ORTHO05D001126 7.0e-08 60.5 40 62.5
MD01G1102600 Malus domestica HOM05D000651 ORTHO05D001126 7.0e-08 60.5 40 67.5
Prupe.2G208200 Prunus persica HOM05D000651 ORTHO05D001126 7.0e-08 60.5 38 71.1
PGSC0003DMG400031068 Solanum tuberosum HOM05D000651 ORTHO05D001126 7.0e-08 60.5 41 65.9
Lsat_1_v5_gn_9_70180 Lactuca sativa HOM05D000651 ORTHO05D001126 9.1e-08 60.1 41 70.7
Manes.10G050700 Manihot esculenta HOM05D000651 ORTHO05D001126 9.1e-08 60.1 36 75.0
Dinv31239 Davidia involucrata HOM05D000651 ORTHO05D001126 1.2e-07 59.7 41 68.3
Lj5g0009503 Lotus japonicus HOM05D000651 ORTHO05D001126 1.2e-07 59.7 40 67.5
Psat6g181160 Pisum sativum HOM05D000651 ORTHO05D001126 1.2e-07 59.7 40 65.0
Actinidia34802 Actinidia chinensis HOM05D000651 ORTHO05D001126 1.6e-07 59.3 41 68.3
Actinidia38872 Actinidia chinensis HOM05D000651 ORTHO05D001126 1.6e-07 59.3 41 68.3
Medtr1g094155 Medicago truncatula HOM05D000651 ORTHO05D001126 2.0e-07 58.9 40 65.0
Nitab4.5_0001450g0220 Nicotiana tabacum HOM05D000651 ORTHO05D001126 2.7e-07 58.5 41 65.9
COL.COLO4_36175 Corchorus olitorius HOM05D000651 ORTHO05D001126 3.5e-07 58.2 38 68.4
ECA232G1050 Erigeron canadensis HOM05D000651 ORTHO05D001126 3.5e-07 58.2 78 44.9
Gohir.A05G411000 Gossypium hirsutum HOM05D000651 ORTHO05D001126 3.5e-07 58.2 32 78.1
Gohir.D04G005000 Gossypium hirsutum HOM05D000651 ORTHO05D001126 3.5e-07 58.2 32 78.1
Gorai.012G006300 Gossypium raimondii HOM05D000651 ORTHO05D001126 3.5e-07 58.2 32 78.1
Thecc.10G085200 Theobroma cacao HOM05D000651 ORTHO05D001126 3.5e-07 58.2 40 67.5
Hma1.2p1_0145F.1_g065290 Hydrangea macrophylla HOM05D000651 ORTHO05D001126 4.5e-07 57.8 41 65.9
Oeu033871.1 Olea europaea HOM05D000651 ORTHO05D001126 4.5e-07 57.8 43 67.4
Phvul.007G245800 Phaseolus vulgaris HOM05D000651 ORTHO05D001126 4.5e-07 57.8 40 62.5
Potri.008G034800 Populus trichocarpa HOM05D000651 ORTHO05D001126 4.5e-07 57.8 40 62.5
SalBow4G1644 Salvia bowleyana HOM05D000651 ORTHO05D001126 4.5e-07 57.8 41 65.9
arahy.Tifrunner.gnm1.ann1.7PSI4R Arachis hypogaea HOM05D000651 ORTHO05D001126 5.9e-07 57.4 40 65.0
MELO3C019830.2 Cucumis melo HOM05D000651 ORTHO05D001126 5.9e-07 57.4 40 60.0
Medtr1g050545 Medicago truncatula HOM05D000651 ORTHO05D001126 5.9e-07 57.4 40 65.0
Sabra08G0023200 Salix brachista HOM05D000651 ORTHO05D001126 5.9e-07 57.4 40 62.5
TAR633G2081 Trochodendron aralioides HOM05D000651 ORTHO05D001126 5.9e-07 57.4 40 62.5
Cpa.g.sc53.140 Carica papaya HOM05D000651 ORTHO05D001126 7.7e-07 57.0 40 62.5
Duzib114G0434 Durio zibethinus HOM05D000651 ORTHO05D001126 7.7e-07 57.0 35 77.1
Duzib128G1575 Durio zibethinus HOM05D000651 ORTHO05D001126 7.7e-07 57.0 40 65.0
Cc02_g10850 Coffea canephora HOM05D000651 ORTHO05D001126 1.0e-06 56.6 78 43.6
Peaxi162Scf00145g01112 Petunia axillaris HOM05D000651 ORTHO05D001126 1.0e-06 56.6 42 64.3
TWI15G1057 Tripterygium wilfordii HOM05D000651 ORTHO05D001126 1.0e-06 56.6 43 60.5
Oeu013847.1 Olea europaea HOM05D000651 ORTHO05D001126 1.3e-06 56.2 41 63.4
Psat6g092800 Pisum sativum HOM05D000651 ORTHO05D001126 1.3e-06 56.2 40 65.0
SGA_v2.0_scaffold62G21380 Striga asiatica HOM05D000651 ORTHO05D001126 1.3e-06 56.2 41 63.4
Cfa001804 Carpinus fangiana HOM05D000651 ORTHO05D001126 1.7e-06 55.8 40 60.0
Gohir.A05G293600 Gossypium hirsutum HOM05D000651 ORTHO05D001126 1.7e-06 55.8 40 62.5
Gohir.D05G294300 Gossypium hirsutum HOM05D000651 ORTHO05D001126 1.7e-06 55.8 40 62.5
Gorai.009G310800 Gossypium raimondii HOM05D000651 ORTHO05D001126 1.7e-06 55.8 40 62.5
Lsat_1_v5_gn_9_70241 Lactuca sativa HOM05D000651 ORTHO05D001126 1.7e-06 55.8 43 60.5
Actinidia07177 Actinidia chinensis HOM05D000651 ORTHO05D001126 2.2e-06 55.5 34 70.6
TPR.G22705 Trifolium pratense HOM05D000651 ORTHO05D001126 2.2e-06 55.5 40 62.5
TWI38G2104 Tripterygium wilfordii HOM05D000651 ORTHO05D001126 2.2e-06 55.5 40 62.5
Zm00001eb321330 Zea mays HOM05D000651 ORTHO05D001126 2.2e-06 55.5 36 66.7
EL10Ac6g14135 Beta vulgaris HOM05D000651 ORTHO05D001126 2.9e-06 55.1 41 63.4
Ca_27286_v3 Cicer arietinum L. HOM05D000651 ORTHO05D001126 2.9e-06 55.1 40 62.5
MBI18_g42729_MAGBIO Magnolia biondii HOM05D000651 ORTHO05D001126 2.9e-06 55.1 40 60.0
MBI18_g48058_MAGBIO Magnolia biondii HOM05D000651 ORTHO05D001126 2.9e-06 55.1 40 60.0
PGR142G2749 Punica granatum HOM05D000651 ORTHO05D001126 2.9e-06 55.1 40 60.0
ClCG08G007760 Citrullus lanatus HOM05D000651 ORTHO05D001126 3.8e-06 54.7 77 41.6
Hma1.2p1_0838F.1_g226280 Hydrangea macrophylla HOM05D000651 ORTHO05D001126 3.8e-06 54.7 41 61.0
Sed0014081 Sechium edule HOM05D000651 ORTHO05D001126 3.8e-06 54.7 77 40.3
CANSAT56G1256 Cannabis sativa HOM05D000651 ORTHO05D001126 5.0e-06 54.3 77 41.6
CAN.G321.57 Capsicum annuum HOM05D000651 ORTHO05D001126 5.0e-06 54.3 41 61.0
AUR62040621 Chenopodium quinoa HOM05D000651 ORTHO05D001126 5.0e-06 54.3 41 61.0
Oeu027952.2 Olea europaea HOM05D000651 ORTHO05D001126 5.0e-06 54.3 43 65.1
Psat7g130160 Pisum sativum HOM05D000651 ORTHO05D001126 5.0e-06 54.3 40 60.0
Aqoxy2G01730 Aquilegia oxysepala HOM05D000651 ORTHO05D001126 6.5e-06 53.9 40 57.5
CiPaw.01G268100 Carya illinoinensis HOM05D000651 ORTHO05D001126 6.5e-06 53.9 30 76.7
PSO801G0370 Papaver somniferum HOM05D000651 ORTHO05D001126 6.5e-06 53.9 35 68.6
arahy.Tifrunner.gnm1.ann1.9M9DE9 Arachis hypogaea HOM05D000651 ORTHO05D001126 8.5e-06 53.5 77 41.6
arahy.Tifrunner.gnm1.ann1.YAWL8X Arachis hypogaea HOM05D000651 ORTHO05D001126 8.5e-06 53.5 77 41.6
Duzib106G0396 Durio zibethinus HOM05D000651 ORTHO05D001126 8.5e-06 53.5 80 46.2
Migut.F01951 Erythranthe guttata HOM05D000651 ORTHO05D001126 8.5e-06 53.5 34 70.6
PSO063G6249 Papaver somniferum HOM05D000651 ORTHO05D001126 8.5e-06 53.5 36 66.7
Peaxi162Scf00160g00713 Petunia axillaris HOM05D000651 ORTHO05D001126 8.5e-06 53.5 30 76.7
Thecc.10G085500 Theobroma cacao HOM05D000651 ORTHO05D001126 8.5e-06 53.5 45 57.8
unitig_46.g18606 Utricularia gibba HOM05D000651 ORTHO05D001126 8.5e-06 53.5 44 61.4


User provided reference genes

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