Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 1.3e-180 636.3 327 100.0
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 2.8e-103 379.4 312 66.3
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 3.0e-97 359.4 342 58.8
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 2.6e-77 293.1 317 53.6
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 4.6e-74 282.3 341 45.7
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 7.9e-74 281.6 333 49.2
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 1.3e-73 280.8 337 46.9
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 1.3e-73 280.8 339 46.9
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 3.9e-73 279.3 352 46.0
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 6.7e-73 278.5 334 45.8
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 4.3e-72 275.8 350 48.0
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 5.6e-72 275.4 350 47.7
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 5.6e-72 275.4 353 47.6
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.3e-71 274.2 352 47.2
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 1.3e-71 274.2 336 47.3
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 2.1e-71 273.5 359 44.0
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 6.2e-71 271.9 319 50.2
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 4.0e-70 269.2 350 46.9
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 6.9e-70 268.5 337 46.3
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 2.6e-69 266.5 352 45.7
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 4.5e-69 265.8 345 43.8
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 5.8e-69 265.4 349 43.0
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 7.6e-69 265.0 340 44.4
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 2.9e-68 263.1 346 44.5
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 4.9e-68 262.3 321 45.5
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 6.5e-68 261.9 343 43.1
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 1.1e-67 261.2 331 46.5
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 1.4e-67 260.8 331 45.0
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 3.2e-67 259.6 326 44.8
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 2.7e-66 256.5 337 45.7
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 4.6e-66 255.8 334 47.3
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 1.3e-65 254.2 341 43.1
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.8e-65 253.8 321 46.1
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 2.3e-65 253.4 321 46.1
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 2.3e-65 253.4 321 46.1
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 6.7e-65 251.9 356 41.9
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 2.5e-64 250.0 347 42.7
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 3.3e-64 249.6 326 43.9
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 9.6e-64 248.1 319 45.8
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 1.6e-63 247.3 333 44.1
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 2.1e-63 246.9 348 42.2
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 1.8e-62 243.8 304 46.7
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 1.8e-62 243.8 341 43.7
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 2.4e-62 243.4 341 41.9
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 3.1e-62 243.0 316 45.3
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 3.1e-62 243.0 303 46.9
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 5.3e-62 242.3 336 42.6
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 6.9e-62 241.9 326 47.2
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 1.2e-61 241.1 303 49.2
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 1.5e-61 240.7 333 44.1
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 2.0e-61 240.4 330 43.9
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 2.6e-61 240.0 347 42.4
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 5.8e-61 238.8 345 42.0
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 2.2e-60 236.9 346 42.8
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 1.9e-59 233.8 342 40.6
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 4.2e-59 232.6 330 42.4
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 3.5e-58 229.6 315 45.1
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 1.0e-57 228.0 344 39.8
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 3.0e-57 226.5 265 51.3
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 3.9e-57 226.1 338 39.3
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 3.9e-57 226.1 341 41.1
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 1.1e-56 224.6 344 39.5
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 1.5e-56 224.2 319 42.3
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 9.7e-56 221.5 324 40.7
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 4.8e-55 219.2 288 47.2
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 1.8e-54 217.2 305 43.0
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 4.1e-54 216.1 294 43.9
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 9.0e-54 214.9 327 42.5
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 2.9e-52 209.9 300 42.3
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 1.1e-51 208.0 261 49.4
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 8.8e-49 198.4 314 41.1
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 8.8e-49 198.4 314 41.1
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 1.7e-47 194.1 308 41.6
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 1.7e-47 194.1 253 47.0
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 6.3e-47 192.2 239 46.9
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 8.2e-47 191.8 235 49.4
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 4.5e-45 186.0 314 39.8
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 5.9e-45 185.7 311 38.9
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 3.8e-44 183.0 202 52.5
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 6.5e-44 182.2 265 44.2
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 1.0e-41 174.9 314 38.9
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 5.1e-41 172.6 296 40.2
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 6.7e-41 172.2 319 39.2
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.1e-40 171.4 314 36.6
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 4.4e-40 169.5 314 36.3
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 7.4e-40 168.7 330 36.4
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 7.4e-40 168.7 290 39.7
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 2.2e-39 167.2 341 34.6
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 2.8e-39 166.8 315 38.7
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 8.2e-39 165.2 314 37.3
HanXRQChr04g0096591 Helianthus annuus HOM05D006619 ORTHO05D008351 1.1e-38 164.9 93 88.2
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 1.8e-38 164.1 314 37.9
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 3.1e-38 163.3 314 35.4
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 5.3e-38 162.5 213 47.4
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 7.0e-38 162.2 269 37.5
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 4.5e-37 159.5 321 37.7
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 4.5e-37 159.5 313 37.4
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 4.5e-37 159.5 321 37.7
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 1.0e-36 158.3 321 37.4
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 2.2e-36 157.1 196 49.5
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 2.6e-32 143.7 264 39.0
Zm00001eb140380 Zea mays HOM05D006619 ORTHO05D008351 1.7e-28 131.0 264 34.8
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 8.5e-28 128.6 262 34.7
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 1.1e-27 128.3 267 34.1
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 5.5e-27 125.9 103 63.1
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 1.2e-24 118.2 162 40.1
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 3.7e-23 113.2 252 33.3
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 3.1e-22 110.2 254 31.5
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 1.6e-21 107.8 266 31.2
Os01g0962100 Oryza sativa ssp. japonica HOM05D006619 ORTHO05D008351 2.2e-20 104.0 302 29.8
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 3.6e-18 96.7 301 26.2
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.8e-17 94.4 112 42.0
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 1.8e-17 94.4 112 42.0
COL.COLO4_16514 Corchorus olitorius HOM05D006619 ORTHO05D008351 2.6e-16 90.5 235 31.1
Nn1g09286 Nelumbo nucifera HOM05D006619 ORTHO05D008351 2.0e-08 64.3 70 41.4


User provided reference genes

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