Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0171711 Helianthus annuus HOM05D006667 ORTHO05D008387 1.2e-114 417.5 420 100.0
HanXRQChr17g0541041 Helianthus annuus HOM05D006667 ORTHO05D008387 9.2e-67 258.5 394 84.5
Lsat_1_v5_gn_3_34481 Lactuca sativa HOM05D006667 ORTHO05D008387 5.6e-64 249.2 426 79.3
ECA246G5028 Erigeron canadensis HOM05D002605 ORTHO05D002842 3.0e-62 243.4 385 85.2
Actinidia04346 Actinidia chinensis HOM05D006667 ORTHO05D008387 3.5e-58 229.9 390 66.4
Dinv07500 Davidia involucrata HOM05D006667 ORTHO05D008387 7.8e-58 228.8 392 69.6
Lj6A708T61 Lonicera japonica HOM05D006667 ORTHO05D008387 1.1e-56 224.9 392 68.4
Lj6A713T75 Lonicera japonica HOM05D006667 ORTHO05D008387 1.1e-56 224.9 392 68.4
Rhsim12G0089400 Rhododendron simsii HOM05D006667 ORTHO05D008387 1.2e-55 221.5 393 64.1
Thecc.02G154400 Theobroma cacao HOM05D006667 ORTHO05D008387 8.9e-54 215.3 393 73.8
Gorai.008G147100 Gossypium raimondii HOM05D006667 ORTHO05D008387 1.5e-53 214.5 393 73.3
Gohir.D12G135900 Gossypium hirsutum HOM05D006667 ORTHO05D008387 4.4e-53 213.0 393 73.0
Nitab4.5_0004979g0060 Nicotiana tabacum HOM05D006667 ORTHO05D008387 2.2e-52 210.7 392 69.4
PGSC0003DMG400011513 Solanum tuberosum HOM05D006667 ORTHO05D008387 6.4e-52 209.1 391 64.7
QL03p045401 Quercus lobata HOM05D006667 ORTHO05D008387 1.4e-51 208.0 393 67.2
Peaxi162Scf00681g00319 Petunia axillaris HOM05D006667 ORTHO05D008387 2.4e-51 207.2 392 65.8
THA.LOC104819372 Tarenaya hassleriana HOM05D006667 ORTHO05D008387 4.1e-51 206.5 393 67.2
Solyc04g008980.3 Solanum lycopersicum HOM05D006667 ORTHO05D008387 1.2e-50 204.9 391 68.3
Migut.L00803 Erythranthe guttata HOM05D006667 ORTHO05D008387 2.1e-50 204.1 400 64.5
Nitab4.5_0005997g0030 Nicotiana tabacum HOM05D006667 ORTHO05D008387 2.1e-50 204.1 392 69.1
Sopen04g004160 Solanum pennellii HOM05D006667 ORTHO05D008387 2.1e-50 204.1 391 68.5
Sed0011343 Sechium edule HOM05D006667 ORTHO05D008387 2.7e-50 203.8 406 65.8
VMungo0720G1985 Vigna mungo HOM05D006667 ORTHO05D008387 3.5e-50 203.4 393 63.6
CAN.G274.16 Capsicum annuum HOM05D006667 ORTHO05D008387 4.6e-50 203.0 390 69.7
FvH4_4g37160 Fragaria vesca HOM05D006667 ORTHO05D008387 4.6e-50 203.0 390 62.6
FAN12G3199 Fragaria x ananassa HOM05D006667 ORTHO05D008387 4.6e-50 203.0 390 62.6
Prupe.1G349400 Prunus persica HOM05D006667 ORTHO05D008387 4.6e-50 203.0 392 63.0
Sabra05G0073100 Salix brachista HOM05D006667 ORTHO05D008387 6.0e-50 202.6 393 62.8
ClCG02G014160 Citrullus lanatus HOM05D006667 ORTHO05D008387 1.0e-49 201.8 392 67.6
RcHm_v2.0_Chr4g0446961 Rosa chinensis HOM05D006667 ORTHO05D008387 1.3e-49 201.4 391 62.7
CSS0023228 Camellia sinensis var. sinensis HOM05D006667 ORTHO05D008387 3.0e-49 200.3 393 67.7
Manes.04G162700 Manihot esculenta HOM05D006667 ORTHO05D008387 6.6e-49 199.1 395 70.4
Hund24389 Selenicereus undatus HOM05D006667 ORTHO05D008387 1.1e-48 198.4 407 65.4
Lj5g0023243 Lotus japonicus HOM05D006667 ORTHO05D008387 1.5e-48 198.0 392 64.5
DCAR_002607 Daucus carota HOM05D006667 ORTHO05D008387 1.9e-48 197.6 407 60.9
TAR622G0133 Trochodendron aralioides HOM05D006667 ORTHO05D008387 4.3e-48 196.4 395 62.3
CsaV3_5G029020 Cucumis sativus L. HOM05D006667 ORTHO05D008387 5.6e-48 196.1 393 61.6
Potri.005G088800 Populus trichocarpa HOM05D006667 ORTHO05D008387 5.6e-48 196.1 393 63.9
MBI06_g27487_MAGBIO Magnolia biondii HOM05D006667 ORTHO05D008387 9.5e-48 195.3 392 65.3
Hma1.2p1_0044F.1_g026320 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 1.2e-47 194.9 392 66.1
Sed0022119 Sechium edule HOM05D006667 ORTHO05D008387 1.2e-47 194.9 392 66.8
TPR.G4129 Trifolium pratense HOM05D006667 ORTHO05D008387 1.6e-47 194.5 395 67.6
TWI53G1716 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 2.1e-47 194.1 402 74.6
Aqoxy3G04313 Aquilegia oxysepala HOM05D006667 ORTHO05D008387 2.8e-47 193.7 392 58.4
C02p60910 Brassica napus HOM05D006667 ORTHO05D008387 2.8e-47 193.7 393 61.3
MELO3C011757.2 Cucumis melo HOM05D006667 ORTHO05D008387 2.8e-47 193.7 393 61.3
BcaC03g18029 Brassica carinata HOM05D006667 ORTHO05D008387 3.6e-47 193.4 393 61.3
EL10Ac9g22983 Beta vulgaris HOM05D006667 ORTHO05D008387 4.7e-47 193.0 392 66.1
Medtr1g114610 Medicago truncatula HOM05D006667 ORTHO05D008387 2.3e-46 190.7 402 60.7
BraA06t26360Z Brassica rapa HOM05D006667 ORTHO05D008387 3.1e-46 190.3 393 64.6
CiPaw.05G172300 Carya illinoinensis HOM05D006667 ORTHO05D008387 5.2e-46 189.5 396 64.6
Thhalv10004329m.g Eutrema salsugineum HOM05D006667 ORTHO05D008387 5.2e-46 189.5 393 65.4
A02p41020 Brassica napus HOM05D006667 ORTHO05D008387 6.8e-46 189.1 393 62.1
Cpa.g.sc60.94 Carica papaya HOM05D006667 ORTHO05D008387 1.2e-45 188.3 393 64.1
TWI74G1436 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 3.4e-45 186.8 402 63.2
Oeu027930.1 Olea europaea HOM05D006667 ORTHO05D008387 4.4e-45 186.4 390 76.2
BraA02t09050Z Brassica rapa HOM05D006667 ORTHO05D008387 9.9e-45 185.3 393 61.8
PGR142G2507 Punica granatum HOM05D006667 ORTHO05D008387 1.3e-44 184.9 392 65.3
BcaB07g29860 Brassica carinata HOM05D006667 ORTHO05D008387 2.9e-44 183.7 391 69.8
AL6G34600 Arabidopsis lyrata HOM05D006667 ORTHO05D008387 3.7e-44 183.3 393 64.6
Psat6g234200 Pisum sativum HOM05D006667 ORTHO05D008387 3.7e-44 183.3 392 60.2
unitig_749.g13342 Utricularia gibba HOM05D006667 ORTHO05D008387 4.9e-44 183.0 391 62.9
Sabra07G0063900 Salix brachista HOM05D006667 ORTHO05D008387 6.4e-44 182.6 454 48.7
Carub.0006s2112 Capsella rubella HOM05D006667 ORTHO05D008387 3.2e-43 180.3 393 66.7
SalBow2G2931 Salvia bowleyana HOM05D006667 ORTHO05D008387 7.1e-43 179.1 390 61.0
Glyma.20G102500 Glycine max HOM05D006667 ORTHO05D008387 2.7e-42 177.2 401 64.8
Glyma.10G286600 Glycine max HOM05D006667 ORTHO05D008387 1.3e-41 174.9 413 58.4
arahy.Tifrunner.gnm1.ann1.F8B6JQ Arachis hypogaea HOM05D006667 ORTHO05D008387 2.3e-41 174.1 403 59.1
arahy.Tifrunner.gnm1.ann1.IH6UK4 Arachis hypogaea HOM05D006667 ORTHO05D008387 8.6e-41 172.2 393 59.8
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 8.6e-41 172.2 393 59.8
BolC7t44948H Brassica oleracea HOM05D006667 ORTHO05D008387 1.1e-40 171.8 393 63.4
Ca_11261_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 1.1e-40 171.8 392 65.8
Eucgr.G02589 Eucalyptus grandis HOM05D006667 ORTHO05D008387 3.3e-40 170.2 397 67.3
Sp2g23820 Schrenkiella parvula HOM05D006667 ORTHO05D008387 4.3e-40 169.9 393 62.1
A06p34280 Brassica napus HOM05D006667 ORTHO05D008387 7.3e-40 169.1 393 63.1
Lalb_Chr02g0143651 Lupinus albus HOM05D006667 ORTHO05D008387 7.3e-40 169.1 391 59.3
Aa31LG11G2790 Aethionema arabicum HOM05D006667 ORTHO05D008387 3.6e-39 166.8 393 59.3
Ciclev10033734m.g Citrus clementina HOM05D006667 ORTHO05D008387 3.6e-39 166.8 393 57.5
Hma1.2p1_0044F.1_g026310 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 3.6e-39 166.8 438 39.3
Atru.chr11.1242 Acer truncatum HOM05D006667 ORTHO05D008387 6.2e-39 166.0 393 59.5
AT5G23340 Arabidopsis thaliana HOM05D006667 ORTHO05D008387 1.8e-38 164.5 393 62.6
Cfa008778 Carpinus fangiana HOM05D006667 ORTHO05D008387 2.4e-38 164.1 402 59.2
AUR62032948 Chenopodium quinoa HOM05D006667 ORTHO05D008387 8.9e-38 162.2 395 58.0
CARHR190200 Cardamine hirsuta HOM05D006667 ORTHO05D008387 4.4e-37 159.8 393 58.8
MSTRG.8092 Avicennia marina HOM05D006667 ORTHO05D008387 5.8e-37 159.5 392 60.2
CANSAT78G2402 Cannabis sativa HOM05D006667 ORTHO05D008387 7.6e-37 159.1 394 59.4
CDE04G2906 Ceratophyllum demersum HOM05D006667 ORTHO05D008387 9.9e-37 158.7 107 71.0
COL.COLO4_33111 Corchorus olitorius HOM05D006667 ORTHO05D008387 1.7e-36 157.9 253 80.6
Sc10g0006700 Simmondsia chinensis HOM05D006667 ORTHO05D008387 1.7e-36 157.9 398 57.5
Zm00001eb185570 Zea mays HOM05D006667 ORTHO05D008387 4.9e-36 156.4 394 53.3
Nn3g18579 Nelumbo nucifera HOM05D006667 ORTHO05D008387 1.9e-35 154.5 109 68.8
SGA_v2.0_scaffold80G25957 Striga asiatica HOM05D006667 ORTHO05D008387 1.9e-35 154.5 392 58.2
Haze_11790 Corylus avellana HOM05D006667 ORTHO05D008387 1.2e-34 151.8 107 69.2
Ah.03g147880 Amaranthus hybridus HOM05D006667 ORTHO05D008387 4.6e-34 149.8 116 61.2
arahy.Tifrunner.gnm1.ann1.6XP1A8 Arachis hypogaea HOM05D006667 ORTHO05D008387 4.6e-34 149.8 107 68.2
arahy.Tifrunner.gnm1.ann1.RI7T4X Arachis hypogaea HOM05D006667 ORTHO05D008387 4.6e-34 149.8 107 68.2
vmacro15997 Vaccinium macrocarpon HOM05D006667 ORTHO05D008387 1.3e-33 148.3 107 68.2
PSO017G3027 Papaver somniferum HOM05D006667 ORTHO05D008387 3.9e-33 146.7 108 63.9
PSO170G5099 Papaver somniferum HOM05D006667 ORTHO05D008387 3.9e-33 146.7 108 64.8
arahy.Tifrunner.gnm1.ann1.ALJ85P Arachis hypogaea HOM05D006667 ORTHO05D008387 2.8e-31 140.6 95 72.6
SEGI_01489 Sequoiadendron giganteum HOM05D006667 ORTHO05D008387 4.4e-29 133.3 107 59.8
arahy.Tifrunner.gnm1.ann1.L6WSTP Arachis hypogaea HOM05D006667 ORTHO05D008387 4.9e-28 129.8 91 70.3
ATR0618G066 Amborella trichopoda HOM05D006667 ORTHO05D008387 1.4e-27 128.3 109 55.0
HPP92_025485 Vanilla planifolia HOM05D006667 ORTHO05D008387 3.2e-27 127.1 106 60.4
SMO116G0353 Selaginella moellendorffii HOM05D006667 ORTHO05D008387 9.3e-27 125.6 107 57.0
AUR62017733 Chenopodium quinoa HOM05D006667 ORTHO05D008387 3.5e-26 123.6 408 49.3
Gohir.A12G132300 Gossypium hirsutum HOM05D006667 ORTHO05D008387 2.9e-20 104.0 174 61.5
Potri.007G075600 Populus trichocarpa HOM05D006667 ORTHO05D008387 1.2e-18 98.6 386 35.2
Os02g0636400 Oryza sativa ssp. japonica HOM05D006667 ORTHO05D008387 9.6e-16 89.0 175 41.1
Dinv17648 Davidia involucrata HOM05D006667 ORTHO05D008387 1.4e-14 85.1 68 63.2
Phvul.007G014200 Phaseolus vulgaris HOM05D006667 ORTHO05D008387 1.8e-09 68.2 175 42.9
Ca_11262_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 3.0e-09 67.4 171 42.1


User provided reference genes

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