Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0171431 Helianthus annuus HOM05D001277 ORTHO05D000950 3.1e-96 355.1 180 100.0
HanXRQChr06g0171301 Helianthus annuus HOM05D001277 ORTHO05D000950 2.0e-58 229.6 161 77.0
ECA246G0285 Erigeron canadensis HOM05D001277 ORTHO05D000950 5.9e-47 191.4 154 63.6
HanXRQChr17g0541581 Helianthus annuus HOM05D001277 ORTHO05D000950 2.3e-43 179.5 156 60.9
Lsat_1_v5_gn_3_37760 Lactuca sativa HOM05D001277 ORTHO05D000950 9.8e-34 147.5 170 51.8
Lsat_1_v5_gn_8_136380 Lactuca sativa HOM05D001277 ORTHO05D000950 1.0e-19 100.9 112 49.1
Hma1.2p1_0002F.1_g001990 Hydrangea macrophylla HOM05D001277 ORTHO05D000950 1.0e-14 84.3 152 35.5
DCAR_021251 Daucus carota HOM05D001277 ORTHO05D000950 8.0e-12 74.7 117 39.3
MSTRG.6796 Avicennia marina HOM05D001277 ORTHO05D000950 1.1e-11 74.3 165 27.3
Dinv08386 Davidia involucrata HOM05D001277 ORTHO05D004973 2.3e-11 73.2 160 30.0
Duzib052G0158 Durio zibethinus HOM05D001277 ORTHO05D000950 1.5e-10 70.5 153 32.0
CiPaw.03G178400 Carya illinoinensis HOM05D001277 ORTHO05D000950 3.4e-10 69.3 159 31.4
FvH4_6g26360 Fragaria vesca HOM05D001277 ORTHO05D000950 3.4e-10 69.3 165 30.9
Dinv00852 Davidia involucrata HOM05D001277 ORTHO05D000950 4.4e-10 68.9 171 31.0
TPR.G6429 Trifolium pratense HOM05D001277 ORTHO05D000950 4.4e-10 68.9 159 29.6
Oeu017496.1 Olea europaea HOM05D001277 ORTHO05D000950 5.8e-10 68.6 169 29.6
FAN09G2322 Fragaria x ananassa HOM05D001277 ORTHO05D000950 7.5e-10 68.2 162 32.1
GSVIVG01020561001 Vitis vinifera HOM05D001277 ORTHO05D000950 2.9e-09 66.2 168 30.4
Ciclev10016466m.g Citrus clementina HOM05D001277 ORTHO05D000950 3.7e-09 65.9 164 30.5
Gorai.012G127900 Gossypium raimondii HOM05D001277 ORTHO05D000950 3.7e-09 65.9 157 29.3
RcHm_v2.0_Chr2g0126861 Rosa chinensis HOM05D001277 ORTHO05D000950 3.7e-09 65.9 139 33.8
Cfa014626 Carpinus fangiana HOM05D001277 ORTHO05D000950 8.3e-09 64.7 160 30.0
Cc05_g07310 Coffea canephora HOM05D001277 ORTHO05D000950 8.3e-09 64.7 164 28.0
Migut.M00292 Erythranthe guttata HOM05D001277 ORTHO05D000950 8.3e-09 64.7 164 26.8
Gohir.A04G103200 Gossypium hirsutum HOM05D001277 ORTHO05D000950 8.3e-09 64.7 157 29.9
Manes.12G088952 Manihot esculenta HOM05D001277 ORTHO05D000950 8.3e-09 64.7 153 28.8
Manes.12G088914 Manihot esculenta HOM05D001277 ORTHO05D000950 1.4e-08 63.9 152 29.6
Thecc.02G181300 Theobroma cacao HOM05D001277 ORTHO05D000950 1.9e-08 63.5 162 29.6
Gohir.D04G142600 Gossypium hirsutum HOM05D001277 ORTHO05D000950 2.4e-08 63.2 157 29.3
TWI59G0794 Tripterygium wilfordii HOM05D001277 ORTHO05D000950 2.4e-08 63.2 117 33.3
Manes.13G145600 Manihot esculenta HOM05D001277 ORTHO05D000950 3.2e-08 62.8 164 27.4
Medtr2g090500 Medicago truncatula HOM05D001277 ORTHO05D000950 4.1e-08 62.4 172 29.1
Oeu017501.1 Olea europaea HOM05D001277 ORTHO05D000950 5.4e-08 62.0 169 28.4
Haze_13181 Corylus avellana HOM05D001277 ORTHO05D000950 9.2e-08 61.2 159 28.9
Potri.019G099300 Populus trichocarpa HOM05D001277 ORTHO05D000950 9.2e-08 61.2 168 28.6
Potri.019G099500 Populus trichocarpa HOM05D001277 ORTHO05D000950 9.2e-08 61.2 168 28.6
Dinv17320 Davidia involucrata HOM05D001277 ORTHO05D000950 1.2e-07 60.8 135 33.3
Medtr2g090480 Medicago truncatula HOM05D001277 ORTHO05D000950 1.6e-07 60.5 159 30.2
Rhsim06G0141200 Rhododendron simsii HOM05D001277 ORTHO05D000950 1.6e-07 60.5 157 28.0
CSS0044106 Camellia sinensis var. sinensis HOM05D001277 ORTHO05D000950 2.0e-07 60.1 163 28.2
MD17G1237900 Malus domestica HOM05D001277 ORTHO05D000950 2.0e-07 60.1 115 32.2
Phvul.011G119500 Phaseolus vulgaris HOM05D001277 ORTHO05D000950 2.0e-07 60.1 162 29.6
CSS0033518 Camellia sinensis var. sinensis HOM05D001277 ORTHO05D000950 2.7e-07 59.7 163 28.2
Psat5g272400 Pisum sativum HOM05D001277 ORTHO05D000950 3.5e-07 59.3 155 27.1
Glyma.12G205200 Glycine max HOM05D001277 ORTHO05D000950 4.6e-07 58.9 143 28.0
Cc05_g07290 Coffea canephora HOM05D001277 ORTHO05D000950 6.0e-07 58.5 108 28.7
TPR.G6414 Trifolium pratense HOM05D001277 ORTHO05D000950 6.0e-07 58.5 130 30.8
Potri.019G099400 Populus trichocarpa HOM05D001277 ORTHO05D000950 1.0e-06 57.8 164 28.0
CiPaw.04G127400 Carya illinoinensis HOM05D001277 ORTHO05D000950 1.7e-06 57.0 166 29.5
PGSC0003DMG400039921 Solanum tuberosum HOM05D001277 ORTHO05D000950 2.3e-06 56.6 165 25.5
MD17G1238500 Malus domestica HOM05D001277 ORTHO05D000950 3.9e-06 55.8 117 29.9
TAR629G1074 Trochodendron aralioides HOM05D001277 ORTHO05D000950 3.9e-06 55.8 126 31.0
Peaxi162Scf00008g00815 Petunia axillaris HOM05D001277 ORTHO05D000950 5.0e-06 55.5 127 29.9
Manes.16G028800 Manihot esculenta HOM05D001277 ORTHO05D000950 6.6e-06 55.1 132 30.3
CSS0045340 Camellia sinensis var. sinensis HOM05D001277 ORTHO05D000950 8.6e-06 54.7 114 31.6
Rhsim02G0131400 Rhododendron simsii HOM05D001277 ORTHO05D000950 8.6e-06 54.7 150 27.3


User provided reference genes

Program Settings