Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
HanXRQChr06g0170541 Helianthus annuus HOM05D000626 ORTHO05D003868 1.9e-47 192.2 99 100.0
HanXRQChr03g0075101 Helianthus annuus HOM05D000626 ORTHO05D003868 9.1e-42 173.3 97 89.7
HanXRQChr15g0487501 Helianthus annuus HOM05D000626 ORTHO05D003868 1.8e-37 159.1 86 95.3
ECA232G3839 Erigeron canadensis HOM05D000626 ORTHO05D003868 1.2e-33 146.4 86 87.2
TAR628G0085 Trochodendron aralioides HOM05D000626 ORTHO05D003868 3.8e-32 141.4 86 83.7
Sabra07G0026800 Salix brachista HOM05D000626 ORTHO05D003868 5.0e-32 141.0 88 79.5
Potri.007G031000 Populus trichocarpa HOM05D000626 ORTHO05D003868 1.1e-31 139.8 86 79.1
Glyma.11G120300 Glycine max HOM05D000626 ORTHO05D003868 3.3e-31 138.3 86 77.9
Duzib264G0072 Durio zibethinus HOM05D000626 ORTHO05D003868 5.6e-31 137.5 86 77.9
Lsat_1_v5_gn_4_144441 Lactuca sativa HOM05D000626 ORTHO05D003868 5.6e-31 137.5 78 88.5
Prupe.8G102600 Prunus persica HOM05D000626 ORTHO05D003868 5.6e-31 137.5 86 77.9
Glyma.12G045400 Glycine max HOM05D000626 ORTHO05D003868 7.3e-31 137.1 86 76.7
Manes.13G136200 Manihot esculenta HOM05D000626 ORTHO05D003868 7.3e-31 137.1 86 80.2
Thecc.01G041600 Theobroma cacao HOM05D000626 ORTHO05D003868 9.5e-31 136.7 87 75.9
MD05G1070400 Malus domestica HOM05D000626 ORTHO05D003868 1.2e-30 136.3 86 76.7
MD10G1081300 Malus domestica HOM05D000626 ORTHO05D003868 1.2e-30 136.3 86 76.7
TAR376G0372 Trochodendron aralioides HOM05D000626 ORTHO05D003868 1.2e-30 136.3 86 81.4
SalBow5G3169 Salvia bowleyana HOM05D000626 ORTHO05D003868 1.6e-30 136.0 86 79.1
Cpa.g.sc158.17 Carica papaya HOM05D000626 ORTHO05D003868 2.1e-30 135.6 86 74.4
Phvul.011G047300 Phaseolus vulgaris HOM05D000626 ORTHO05D003868 2.1e-30 135.6 86 75.6
Potri.005G127000 Populus trichocarpa HOM05D000626 ORTHO05D003868 2.1e-30 135.6 86 76.7
Thecc.02G122300 Theobroma cacao HOM05D000626 ORTHO05D003868 2.1e-30 135.6 86 75.6
CiPaw.05G061300 Carya illinoinensis HOM05D000626 ORTHO05D003868 2.8e-30 135.2 86 77.9
Peaxi162Scf00684g00567 Petunia axillaris HOM05D000626 ORTHO05D003868 2.8e-30 135.2 87 77.0
TPR.G28529 Trifolium pratense HOM05D000626 ORTHO05D003868 2.8e-30 135.2 86 77.9
Dinv39947 Davidia involucrata HOM05D000626 ORTHO05D003868 3.6e-30 134.8 86 77.9
Nn5g29507 Nelumbo nucifera HOM05D000626 ORTHO05D003868 3.6e-30 134.8 86 77.9
Nitab4.5_0000336g0150 Nicotiana tabacum HOM05D000626 ORTHO05D003868 3.6e-30 134.8 88 75.0
Oeu035116.1 Olea europaea HOM05D000626 ORTHO05D003868 3.6e-30 134.8 86 77.9
ATR0733G160 Amborella trichopoda HOM05D000626 ORTHO05D003868 4.7e-30 134.4 85 75.3
Atru.chr3.513 Acer truncatum HOM05D000626 ORTHO05D003868 6.1e-30 134.0 86 79.1
DCAR_017221 Daucus carota HOM05D000626 ORTHO05D003868 6.1e-30 134.0 83 81.9
Gohir.A04G117400 Gossypium hirsutum HOM05D000626 ORTHO05D003868 6.1e-30 134.0 86 75.6
Gohir.A13G048600 Gossypium hirsutum HOM05D000626 ORTHO05D003868 6.1e-30 134.0 88 72.7
Gorai.013G052700 Gossypium raimondii HOM05D000626 ORTHO05D003868 6.1e-30 134.0 86 75.6
Nitab4.5_0000199g0010 Nicotiana tabacum HOM05D000626 ORTHO05D003868 8.0e-30 133.7 87 74.7
Oeu032561.1 Olea europaea HOM05D000626 ORTHO05D003868 8.0e-30 133.7 86 76.7
VMungo1127G0953 Vigna mungo HOM05D000626 ORTHO05D003868 1.0e-29 133.3 86 75.6
GSVIVG01019024001 Vitis vinifera HOM05D000626 ORTHO05D003868 1.0e-29 133.3 83 79.5
COL.COLO4_32455 Corchorus olitorius HOM05D000626 ORTHO05D003868 1.4e-29 132.9 86 76.7
Duzib147G0490 Durio zibethinus HOM05D000626 ORTHO05D003868 1.4e-29 132.9 88 75.0
Gohir.D04G159100 Gossypium hirsutum HOM05D000626 ORTHO05D003868 1.4e-29 132.9 86 74.4
Gorai.012G146500 Gossypium raimondii HOM05D000626 ORTHO05D003868 1.4e-29 132.9 86 74.4
RcHm_v2.0_Chr6g0262991 Rosa chinensis HOM05D000626 ORTHO05D003868 1.4e-29 132.9 86 74.4
Duzib132G0298 Durio zibethinus HOM05D000626 ORTHO05D003868 1.8e-29 132.5 86 74.4
Gohir.D13G047000 Gossypium hirsutum HOM05D000626 ORTHO05D003868 1.8e-29 132.5 86 73.3
Lj3g0026150 Lotus japonicus HOM05D000626 ORTHO05D003868 1.8e-29 132.5 86 76.7
QL11p042537 Quercus lobata HOM05D000626 ORTHO05D003868 1.8e-29 132.5 86 74.4
Eucgr.G01893 Eucalyptus grandis HOM05D000626 ORTHO05D003868 2.3e-29 132.1 86 77.9
Hma1.2p1_0066F.1_g036710 Hydrangea macrophylla HOM05D000626 ORTHO05D003868 2.3e-29 132.1 86 75.6
Psat7g141000 Pisum sativum HOM05D000626 ORTHO05D003868 2.3e-29 132.1 86 75.6
THA.LOC104826869 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 2.3e-29 132.1 86 75.6
CDE01G0575 Ceratophyllum demersum HOM05D000626 ORTHO05D003868 3.0e-29 131.7 87 73.6
Ciclev10028484m.g Citrus clementina HOM05D000626 ORTHO05D003868 3.0e-29 131.7 86 73.3
ClCG09G017810 Citrullus lanatus HOM05D000626 ORTHO05D003868 4.0e-29 131.3 86 75.6
SGA_v2.0_scaffold276G46656 Striga asiatica HOM05D000626 ORTHO05D003868 4.0e-29 131.3 86 74.4
Aqoxy5G01696 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 5.2e-29 131.0 83 77.1
Lalb_Chr01g0002691 Lupinus albus HOM05D000626 ORTHO05D003868 5.2e-29 131.0 86 74.4
Medtr4g069240 Medicago truncatula HOM05D000626 ORTHO05D003868 5.2e-29 131.0 86 75.6
Actinidia00502 Actinidia chinensis HOM05D000626 ORTHO05D003868 6.8e-29 130.6 86 74.4
Cc07_g09070 Coffea canephora HOM05D000626 ORTHO05D003868 8.9e-29 130.2 86 75.6
MELO3C021946.2 Cucumis melo HOM05D000626 ORTHO05D003868 8.9e-29 130.2 86 74.4
CsaV3_2G014400 Cucumis sativus L. HOM05D000626 ORTHO05D003868 8.9e-29 130.2 86 74.4
Sopen01g051600 Solanum pennellii HOM05D000626 ORTHO05D003868 8.9e-29 130.2 86 75.6
TWI09G1554 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 8.9e-29 130.2 86 76.7
GSVIVG01031917001 Vitis vinifera HOM05D000626 ORTHO05D003868 8.9e-29 130.2 86 73.3
Lj5C200G5 Lonicera japonica HOM05D000626 ORTHO05D003868 1.2e-28 129.8 86 74.4
Sed0005165 Sechium edule HOM05D000626 ORTHO05D003868 1.2e-28 129.8 86 73.3
Solyc01g109410.4 Solanum lycopersicum HOM05D000626 ORTHO05D003868 1.2e-28 129.8 86 75.6
Haze_02415 Corylus avellana HOM05D000626 ORTHO05D003868 1.5e-28 129.4 86 73.3
Prupe.7G148700 Prunus persica HOM05D000626 ORTHO05D003868 1.5e-28 129.4 86 74.4
unitig_37.g12815 Utricularia gibba HOM05D000626 ORTHO05D003868 1.5e-28 129.4 83 77.1
FvH4_2g08200 Fragaria vesca HOM05D000626 ORTHO05D003868 2.0e-28 129.0 86 73.3
HanXRQChr05g0134001 Helianthus annuus HOM05D000626 ORTHO05D003868 2.0e-28 129.0 66 98.5
Lalb_Chr03g0025801 Lupinus albus HOM05D000626 ORTHO05D003868 2.0e-28 129.0 86 72.1
SGA_v2.0_scaffold33G13424 Striga asiatica HOM05D000626 ORTHO05D003868 2.0e-28 129.0 86 73.3
HPP92_010187 Vanilla planifolia HOM05D000626 ORTHO05D003868 2.0e-28 129.0 83 77.1
Manes.12G098300 Manihot esculenta HOM05D000626 ORTHO05D003868 2.6e-28 128.6 86 74.4
TWI31G0747 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 2.6e-28 128.6 86 74.4
MSTRG.23557 Avicennia marina HOM05D000626 ORTHO05D003868 3.4e-28 128.3 86 75.6
Migut.H00194 Erythranthe guttata HOM05D000626 ORTHO05D003868 4.4e-28 127.9 86 74.4
Sed0006655 Sechium edule HOM05D000626 ORTHO05D003868 4.4e-28 127.9 85 72.9
TWI53G0930 Tripterygium wilfordii HOM05D000626 ORTHO05D003868 4.4e-28 127.9 86 74.4
Actinidia36541 Actinidia chinensis HOM05D000626 ORTHO05D003868 5.7e-28 127.5 86 72.1
Nitab4.5_0008989g0040 Nicotiana tabacum HOM05D000626 ORTHO05D003868 5.7e-28 127.5 87 71.3
Sc18g0004660 Simmondsia chinensis HOM05D000626 ORTHO05D003868 5.7e-28 127.5 86 70.9
Duzib052G0942 Durio zibethinus HOM05D000626 ORTHO05D003868 7.5e-28 127.1 86 70.9
CAN.G322.113 Capsicum annuum HOM05D000626 ORTHO05D003868 9.8e-28 126.7 86 73.3
Nitab4.5_0001794g0020 Nicotiana tabacum HOM05D000626 ORTHO05D003868 9.8e-28 126.7 83 74.7
Cpa.g.sc62.112 Carica papaya HOM05D000626 ORTHO05D003868 1.3e-27 126.3 86 70.9
PSO541G5997 Papaver somniferum HOM05D000626 ORTHO05D003868 1.3e-27 126.3 85 75.3
PSO675G2926 Papaver somniferum HOM05D000626 ORTHO05D003868 1.3e-27 126.3 85 75.3
THA.LOC104819216 Tarenaya hassleriana HOM05D000626 ORTHO05D003868 1.7e-27 125.9 86 72.1
CSS0006874 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 2.9e-27 125.2 86 69.8
COL.COLO4_22139 Corchorus olitorius HOM05D000626 ORTHO05D003868 2.9e-27 125.2 77 80.5
MD15G1269000 Malus domestica HOM05D000626 ORTHO05D003868 2.9e-27 125.2 85 74.1
SalBow6G3366 Salvia bowleyana HOM05D000626 ORTHO05D003868 2.9e-27 125.2 86 73.3
Aqoxy6G01025 Aquilegia oxysepala HOM05D000626 ORTHO05D003868 3.7e-27 124.8 86 72.1
MSTRG.16792 Avicennia marina HOM05D000626 ORTHO05D003868 3.7e-27 124.8 83 69.9
arahy.Tifrunner.gnm1.ann1.GNS53T Arachis hypogaea HOM05D000626 ORTHO05D003868 4.9e-27 124.4 78 78.2
arahy.Tifrunner.gnm1.ann1.NL7PFA Arachis hypogaea HOM05D000626 ORTHO05D003868 6.4e-27 124.0 78 78.2
BcaB04g20111 Brassica carinata HOM05D000626 ORTHO05D003868 6.4e-27 124.0 86 69.8
FAN20G2380 Fragaria x ananassa HOM05D000626 ORTHO05D003868 6.4e-27 124.0 78 76.9
PGR042G1683 Punica granatum HOM05D000626 ORTHO05D003868 6.4e-27 124.0 86 69.8
SGA_v2.0_scaffold58G20567 Striga asiatica HOM05D000626 ORTHO05D003868 8.3e-27 123.6 86 67.4
BcaB02g10001 Brassica carinata HOM05D000626 ORTHO05D003868 1.1e-26 123.2 86 68.6
Lj4C195G12 Lonicera japonica HOM05D000626 ORTHO05D003868 1.1e-26 123.2 85 74.1
Sp2g30020 Schrenkiella parvula HOM05D000626 ORTHO05D003868 1.1e-26 123.2 86 67.4
AT5G66680 Arabidopsis thaliana HOM05D000626 ORTHO05D003868 1.4e-26 122.9 86 68.6
AL8G44800 Arabidopsis lyrata HOM05D000626 ORTHO05D003868 1.8e-26 122.5 85 69.4
CARHR281040 Cardamine hirsuta HOM05D000626 ORTHO05D003868 1.8e-26 122.5 85 69.4
Ca_20850_v3 Cicer arietinum L. HOM05D000626 ORTHO05D003868 1.8e-26 122.5 78 76.9
Cc02_g17860 Coffea canephora HOM05D000626 ORTHO05D003868 1.8e-26 122.5 83 71.1
SEGI_04451 Sequoiadendron giganteum HOM05D000626 ORTHO05D003868 3.2e-26 121.7 88 68.2
Thhalv10004242m.g Eutrema salsugineum HOM05D000626 ORTHO05D003868 4.1e-26 121.3 86 67.4
Zm00001eb303200 Zea mays HOM05D000626 ORTHO05D003868 5.4e-26 120.9 86 68.6
Aa31LG1G15220 Aethionema arabicum HOM05D000626 ORTHO05D003868 7.0e-26 120.6 86 68.6
BcaC06g34731 Brassica carinata HOM05D000626 ORTHO05D003868 9.2e-26 120.2 86 67.4
C07p25140 Brassica napus HOM05D000626 ORTHO05D003868 9.2e-26 120.2 86 67.4
BolC7t43044H Brassica oleracea HOM05D000626 ORTHO05D003868 9.2e-26 120.2 86 67.4
Carub.0008s2782 Capsella rubella HOM05D000626 ORTHO05D003868 9.2e-26 120.2 85 68.2
BolC9t54060H Brassica oleracea HOM05D000626 ORTHO05D003868 1.2e-25 119.8 86 69.8
BraA09t36632Z Brassica rapa HOM05D000626 ORTHO05D003868 1.2e-25 119.8 86 69.8
Manes.15G148600 Manihot esculenta HOM05D000626 ORTHO05D003868 1.6e-25 119.4 85 69.4
Atru.chr5.2949 Acer truncatum HOM05D000626 ORTHO05D003868 2.0e-25 119.0 83 69.9
vmacro02136 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 2.0e-25 119.0 86 66.3
BcaC04g23148 Brassica carinata HOM05D000626 ORTHO05D003868 2.7e-25 118.6 86 68.6
BraA07t29454Z Brassica rapa HOM05D000626 ORTHO05D003868 2.7e-25 118.6 86 66.3
A09p09850 Brassica napus HOM05D000626 ORTHO05D003868 3.5e-25 118.2 86 68.6
Lj2C447T14 Lonicera japonica HOM05D000626 ORTHO05D003868 3.5e-25 118.2 83 74.7
C09p11660 Brassica napus HOM05D000626 ORTHO05D003868 5.9e-25 117.5 86 67.4
CANSAT01G0918 Cannabis sativa HOM05D000626 ORTHO05D003868 1.3e-24 116.3 86 67.4
Hund14135 Selenicereus undatus HOM05D000626 ORTHO05D003868 1.3e-24 116.3 84 67.9
Hund06221 Selenicereus undatus HOM05D000626 ORTHO05D003868 1.7e-24 115.9 78 70.5
EL10Ac9g21756 Beta vulgaris HOM05D000626 ORTHO05D003868 3.0e-24 115.2 78 71.8
FAN27G0454 Fragaria x ananassa HOM05D000626 ORTHO05D003868 3.9e-24 114.8 91 65.9
EL10Ac6g14893 Beta vulgaris HOM05D000626 ORTHO05D003868 8.6e-24 113.6 84 66.7
CSS0013243 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 8.6e-24 113.6 86 65.1
CSS0002315 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 1.1e-23 113.2 86 65.1
FAN15G2364 Fragaria x ananassa HOM05D000626 ORTHO05D003868 1.1e-23 113.2 91 64.8
AUR62008017 Chenopodium quinoa HOM05D000626 ORTHO05D003868 1.5e-23 112.8 84 66.7
AUR62003200 Chenopodium quinoa HOM05D000626 ORTHO05D003868 1.9e-23 112.5 84 65.5
MD12G1035200 Malus domestica HOM05D000626 ORTHO05D003868 1.9e-23 112.5 86 62.8
CSS0014885 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 7.3e-23 110.5 70 78.6
Duzib251G0751 Durio zibethinus HOM05D000626 ORTHO05D003868 7.3e-23 110.5 86 62.8
A07p17280 Brassica napus HOM05D000626 ORTHO05D003868 2.1e-22 109.0 86 64.0
vmacro23069 Vaccinium macrocarpon HOM05D000626 ORTHO05D003868 2.1e-22 109.0 78 65.4
Ah.01g019620 Amaranthus hybridus HOM05D000626 ORTHO05D003868 3.6e-22 108.2 107 55.1
Actinidia25417 Actinidia chinensis HOM05D000626 ORTHO05D003868 8.0e-22 107.1 70 74.3
Mapoly0103s0006 Marchantia polymorpha HOM05D000626 ORTHO05D003868 6.8e-21 104.0 81 65.4
AUR62011357 Chenopodium quinoa HOM05D000626 ORTHO05D003868 1.5e-20 102.8 71 70.4
FAN24G1839 Fragaria x ananassa HOM05D000626 ORTHO05D003868 4.4e-20 101.3 121 48.8
AagrBONN_evm.TU.Sc2ySwM_117.2383 Anthoceros agrestis HOM05D000626 ORTHO05D003868 9.8e-20 100.1 82 64.6
Pp3c24_6930 Physcomitrium patens HOM05D000626 ORTHO05D003868 9.8e-20 100.1 82 62.2
Zm00001eb095330 Zea mays HOM05D000626 ORTHO05D003868 9.2e-18 93.6 67 68.7
CSS0037823 Camellia sinensis var. sinensis HOM05D000626 ORTHO05D003868 1.2e-17 93.2 65 67.7
CBR_g28880 Chara braunii HOM05D000626 ORTHO05D003868 4.6e-17 91.3 85 49.4
Peaxi162Scf00016g00944 Petunia axillaris HOM05D000626 ORTHO05D003868 4.6e-17 91.3 80 61.2
SGA_v2.0_scaffold31G12912 Striga asiatica HOM05D000626 ORTHO05D003868 6.0e-17 90.9 89 53.9
SMO358G0537 Selaginella moellendorffii HOM05D000626 ORTHO05D003868 3.0e-16 88.6 86 53.5
HPP92_010240 Vanilla planifolia HOM05D000626 ORTHO05D003868 3.0e-16 88.6 59 74.6
BcaB07g29659 Brassica carinata HOM05D000626 ORTHO05D003868 6.6e-16 87.4 73 61.6
Dinv26800 Davidia involucrata HOM05D000626 ORTHO05D003868 1.4e-13 79.7 50 76.0
SGA_v2.0_scaffold146G36209 Striga asiatica HOM05D000626 ORTHO05D003868 2.0e-12 75.9 86 50.0
Cfa019187 Carpinus fangiana HOM05D003289 ORTHO05D034141 5.4e-10 67.8 46 69.6
Cre14.g614100 Chlamydomonas reinhardtii HOM05D000626 ORTHO05D003868 1.2e-09 66.6 82 43.9
AUR62016705 Chenopodium quinoa HOM05D000626 ORTHO05D003868 2.1e-06 55.8 35 68.6
Ah.03g139660 Amaranthus hybridus HOM05D000626 ORTHO05D003868 2.8e-06 55.5 45 57.8


User provided reference genes

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